FFCP PHASE1:Hg19::chr5:78281200..78281243,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=strong | |||
|UniProt=P15848 | |||
|association_with_transcript=364bp_to_ENST00000264914_5end | |||
|cluster_id=chr5:78281200..78281243,- | |||
|description=CAGE_peak_3_at_ARSB_5end | |||
|id=chr5:78281200..78281243,- | |||
|ontology_enrichment_celltype=CL:0000055!8.84e-25!180;CL:0000057!9.73e-11!75;CL:0000183!2.71e-10!59;CL:0000222!1.59e-09!119;CL:0000680!5.25e-09!57;CL:0000056!5.25e-09!57;CL:0000355!5.25e-09!57;CL:0000187!9.58e-09!54;CL:0000192!1.10e-08!42;CL:0000514!1.10e-08!42;CL:0000393!4.37e-08!60;CL:0000211!4.37e-08!60;CL:0000359!3.56e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.61e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.17e-11,76;CL:0000222,1.74e-09,121;CL:0000680,3.30e-09,58;CL:0000056,3.30e-09,58;CL:0000355,3.30e-09,58;CL:0000187,6.08e-09,55;CL:0000192,9.03e-09,43;CL:0000514,9.03e-09,43;CL:0000393,3.42e-08,61;CL:0000211,3.42e-08,61;CL:0000359,3.05e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.31e-13!365;UBERON:0000119!4.87e-13!312;UBERON:0000483!1.29e-12!309;UBERON:0002049!2.95e-10!79;UBERON:0007798!2.95e-10!79;UBERON:0000481!4.08e-10!347;UBERON:0003914!6.87e-10!118;UBERON:0000477!2.02e-09!286;UBERON:0001009!3.40e-09!113;UBERON:0005256!5.26e-09!143;UBERON:0004290!6.29e-09!70;UBERON:0000025!6.92e-09!194;UBERON:0001134!6.96e-09!61;UBERON:0002036!6.96e-09!61;UBERON:0003082!6.96e-09!61;UBERON:0002385!1.18e-08!63;UBERON:0001015!1.18e-08!63;UBERON:0000383!1.18e-08!63;UBERON:0000914!1.19e-08!83;UBERON:0002329!1.19e-08!83;UBERON:0003077!1.19e-08!83;UBERON:0003059!1.19e-08!83;UBERON:0007282!1.19e-08!83;UBERON:0009618!1.19e-08!83;UBERON:0007285!1.19e-08!83;UBERON:0004535!1.38e-08!110;UBERON:0004872!1.54e-08!84;UBERON:0000486!3.05e-08!82;UBERON:0002100!1.48e-07!216;UBERON:0000055!1.71e-07!69;UBERON:0004111!4.18e-07!241;UBERON:0001981!5.53e-07!60;UBERON:0007500!5.53e-07!60;UBERON:0004537!5.53e-07!60;UBERON:0006965!5.53e-07!60;UBERON:0000468!7.04e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.39e-13,309;UBERON:0000483,3.78e-13,306;UBERON:0007503,6.96e-11,78;UBERON:0003104,1.18e-10,160;UBERON:0009142,1.18e-10,160;UBERON:0003914,6.34e-10,117;UBERON:0002049,1.03e-09,78;UBERON:0007798,1.03e-09,78;UBERON:0007524,1.37e-09,73;UBERON:0002329,2.66e-09,71;UBERON:0003059,2.66e-09,71;UBERON:0007282,2.66e-09,71;UBERON:0004290,2.66e-09,71;UBERON:0009618,2.66e-09,71;UBERON:0001134,3.56e-09,62;UBERON:0002036,3.56e-09,62;UBERON:0003082,3.56e-09,62;UBERON:0003077,3.95e-09,72;UBERON:0007285,3.95e-09,72;UBERON:0001009,5.81e-09,112;UBERON:0002385,6.11e-09,64;UBERON:0001015,6.11e-09,64;UBERON:0000383,6.11e-09,64;UBERON:0000025,1.47e-08,192;UBERON:0000486,2.22e-08,83;UBERON:0004535,2.35e-08,109;UBERON:0005256,4.43e-08,122;UBERON:0004872,5.05e-08,83;UBERON:0000490,3.45e-07,148;UBERON:0002100,5.17e-07,199;UBERON:0000055,5.48e-07,68;UBERON:0004111,6.12e-07,240 | |||
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| |||
|short_description=p3@ARSB | |||
}} |
Latest revision as of 20:53, 18 September 2015
Short description: | p3@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARSB_5end |
Coexpression cluster: | NA |
Association with transcript: | 364bp_to_ENST00000264914_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | P15848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.17e-11 | 76 |
mesodermal cell | 1.74e-09 | 121 |
muscle precursor cell | 3.30e-09 | 58 |
myoblast | 3.30e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.30e-09 | 58 |
muscle cell | 6.08e-09 | 55 |
smooth muscle cell | 9.03e-09 | 43 |
smooth muscle myoblast | 9.03e-09 | 43 |
electrically responsive cell | 3.42e-08 | 61 |
electrically active cell | 3.42e-08 | 61 |
vascular associated smooth muscle cell | 3.05e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.39e-13 | 309 |
epithelium | 3.78e-13 | 306 |
epithelial vesicle | 6.96e-11 | 78 |
mesenchyme | 1.18e-10 | 160 |
entire embryonic mesenchyme | 1.18e-10 | 160 |
epithelial tube | 6.34e-10 | 117 |
vasculature | 1.03e-09 | 78 |
vascular system | 1.03e-09 | 78 |
dense mesenchyme tissue | 1.37e-09 | 73 |
somite | 2.66e-09 | 71 |
presomitic mesoderm | 2.66e-09 | 71 |
presumptive segmental plate | 2.66e-09 | 71 |
dermomyotome | 2.66e-09 | 71 |
trunk paraxial mesoderm | 2.66e-09 | 71 |
skeletal muscle tissue | 3.56e-09 | 62 |
striated muscle tissue | 3.56e-09 | 62 |
myotome | 3.56e-09 | 62 |
paraxial mesoderm | 3.95e-09 | 72 |
presumptive paraxial mesoderm | 3.95e-09 | 72 |
circulatory system | 5.81e-09 | 112 |
muscle tissue | 6.11e-09 | 64 |
musculature | 6.11e-09 | 64 |
musculature of body | 6.11e-09 | 64 |
tube | 1.47e-08 | 192 |
multilaminar epithelium | 2.22e-08 | 83 |
cardiovascular system | 2.35e-08 | 109 |
trunk mesenchyme | 4.43e-08 | 122 |
splanchnic layer of lateral plate mesoderm | 5.05e-08 | 83 |
unilaminar epithelium | 3.45e-07 | 148 |
trunk | 5.17e-07 | 199 |
vessel | 5.48e-07 | 68 |
anatomical conduit | 6.12e-07 | 240 |