FFCP PHASE1:Hg19::chr8:67579374..67579416,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:67579374..67579416,- to FFCP PHASE1:Hg19::chr8:67579374..67579416,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80124 | |EntrezGene=80124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30897 | |HGNC=30897 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JH7 | |UniProt=Q96JH7 | ||
|association_with_transcript=35bp_to_ENST00000310421,NM_025054,uc003xwn.2_5end | |||
|cluster_id=chr8:67579374..67579416,- | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_3_at_VCPIP1_5end | |||
|id=chr8:67579374..67579416,- | |||
|ontology_enrichment_celltype=CL:0000037!1.64e-39!172;CL:0000566!1.64e-39!172;CL:0002032!1.94e-37!165;CL:0000837!1.94e-37!165;CL:0000738!7.84e-35!140;CL:0000988!1.66e-34!182;CL:0002031!2.03e-30!124;CL:0002087!2.34e-27!119;CL:0000763!3.53e-26!112;CL:0000049!3.53e-26!112;CL:0000766!4.90e-23!76;CL:0000839!2.87e-19!70;CL:0000557!4.50e-19!71;CL:0002009!1.36e-16!65;CL:0002057!1.52e-16!42;CL:0002194!5.93e-16!63;CL:0000576!5.93e-16!63;CL:0000040!5.93e-16!63;CL:0000559!5.93e-16!63;CL:0000860!2.96e-15!45;CL:0000791!2.10e-11!18;CL:0000789!2.10e-11!18;CL:0002420!2.10e-11!18;CL:0002419!2.10e-11!18;CL:0000790!2.10e-11!18;CL:0000838!1.62e-10!52;CL:0000542!3.69e-10!53;CL:0000051!3.69e-10!53;CL:0000084!7.73e-10!25;CL:0000827!7.73e-10!25;CL:0000625!2.05e-07!11;CL:0000134!4.83e-07!358;CL:0000094!9.34e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.09e-13;48!CL:0000860;2.60e-12;33!CL:0002057;2.60e-12;33!CL:0000791;3.38e-12;18!CL:0000789;3.38e-12;18!CL:0002419;3.38e-12;18!CL:0000766;3.74e-11;69!CL:0000084;6.51e-10;25!CL:0000763;1.92e-09;100!CL:0000473;3.78e-09;39!CL:0000234;3.78e-09;39!CL:0002087;1.06e-08;104!CL:0000738;1.06e-08;136!CL:0000625;6.05e-08;11!CL:0000094;3.48e-07;8!CL:0000988;5.35e-07;177!CL:0000542;8.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.55e-41,168;CL:0002032,5.56e-39,161;CL:0000837,5.56e-39,161;CL:0000738,1.04e-36,136;CL:0000988,3.39e-36,177;CL:0002031,1.19e-32,120;CL:0002087,4.28e-29,115;CL:0000763,2.09e-28,108;CL:0000049,2.09e-28,108;CL:0000766,3.62e-26,72;CL:0000839,4.88e-22,66;CL:0000557,8.53e-22,67;CL:0002009,4.22e-19,61;CL:0002194,2.05e-18,59;CL:0000576,2.05e-18,59;CL:0000040,2.05e-18,59;CL:0000559,2.05e-18,59;CL:0000860,2.62e-17,42;CL:0002057,2.62e-17,42;CL:0000473,4.39e-16,48;CL:0000234,4.39e-16,48;CL:0000791,5.84e-12,18;CL:0000789,5.84e-12,18;CL:0002420,5.84e-12,18;CL:0002419,5.84e-12,18;CL:0000790,5.84e-12,18;CL:0000838,2.98e-10,52;CL:0000084,7.01e-10,25;CL:0000827,7.01e-10,25;CL:0000542,1.12e-09,53;CL:0000051,1.12e-09,53;CL:0000625,9.57e-08,11;CL:0000094,4.74e-07,8;CL:0000134,6.39e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.44e-13;42!CL:0000790;3.38e-12;18!CL:0000049;1.71e-08;108!CL:0000051;8.01e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.72e-23!102;UBERON:0003061!5.72e-23!102;UBERON:0002193!1.45e-18!112;UBERON:0002371!1.19e-17!80;UBERON:0001474!2.22e-15!86;UBERON:0004765!3.16e-13!101;UBERON:0001434!3.16e-13!101;UBERON:0007023!5.13e-11!115;UBERON:0002405!8.17e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.48e-26,98;UBERON:0003061,6.48e-26,98;UBERON:0002193,1.61e-21,108;UBERON:0002371,1.60e-20,76;UBERON:0001474,3.75e-18,82;UBERON:0002405,9.93e-18,93;UBERON:0004765,1.05e-16,90;UBERON:0001434,4.76e-14,100;UBERON:0007023,5.99e-11,114 | |||
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| ||
|short_description=p3@VCPIP1 | |||
}} | }} |
Latest revision as of 21:33, 18 September 2015
Short description: | p3@VCPIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VCPIP1_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 35bp_to_ENST00000310421, NM_025054, uc003xwn.2_5end |
EntrezGene: | VCPIP1 |
HGNC: | 30897 |
UniProt: | Q96JH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.48e-26 | 98 |
blood island | 6.48e-26 | 98 |
hemolymphoid system | 1.61e-21 | 108 |
bone marrow | 1.60e-20 | 76 |
bone element | 3.75e-18 | 82 |
immune system | 9.93e-18 | 93 |
skeletal element | 1.05e-16 | 90 |
skeletal system | 4.76e-14 | 100 |
adult organism | 5.99e-11 | 114 |