FFCP PHASE1:Hg19::chr17:17584873..17584914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10743 | |EntrezGene=10743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9834 | |HGNC=9834 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5J4 | |UniProt=Q7Z5J4 | ||
|association_with_transcript=86bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | |association_with_transcript=86bp_to_ENST00000353383,NM_030665,uc002grm.2_5end | ||
|cluster_id=chr17:17584873..17584914,+ | |||
|description=CAGE_peak_3_at_RAI1_5end | |description=CAGE_peak_3_at_RAI1_5end | ||
|id=chr17:17584873..17584914,+ | |id=chr17:17584873..17584914,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-14!115;UBERON:0000062!4.89e-11!511;UBERON:0001049!5.85e-11!57;UBERON:0005068!5.85e-11!57;UBERON:0006241!5.85e-11!57;UBERON:0007135!5.85e-11!57;UBERON:0003080!1.05e-09!42;UBERON:0002616!1.17e-09!59;UBERON:0000955!1.81e-09!69;UBERON:0006238!1.81e-09!69;UBERON:0002780!2.45e-09!41;UBERON:0001890!2.45e-09!41;UBERON:0006240!2.45e-09!41;UBERON:0002020!7.46e-09!34;UBERON:0003528!7.46e-09!34;UBERON:0002619!9.01e-09!22;UBERON:0001893!9.54e-09!34;UBERON:0001869!1.11e-08!32;UBERON:0002791!2.66e-08!33;UBERON:0004121!2.93e-08!169;UBERON:0001017!4.35e-08!82;UBERON:0001950!6.35e-08!20;UBERON:0005743!7.61e-08!86;UBERON:0003075!8.35e-08!86;UBERON:0007284!8.35e-08!86;UBERON:0000924!1.48e-07!173;UBERON:0006601!1.48e-07!173;UBERON:0000033!2.32e-07!123;UBERON:0000480!3.33e-07!626;UBERON:0000467!5.47e-07!625;UBERON:0000956!5.77e-07!25;UBERON:0000203!5.77e-07!25;UBERON:0002346!7.95e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-14!115;UBERON:0000062!4.89e-11!511;UBERON:0001049!5.85e-11!57;UBERON:0005068!5.85e-11!57;UBERON:0006241!5.85e-11!57;UBERON:0007135!5.85e-11!57;UBERON:0003080!1.05e-09!42;UBERON:0002616!1.17e-09!59;UBERON:0000955!1.81e-09!69;UBERON:0006238!1.81e-09!69;UBERON:0002780!2.45e-09!41;UBERON:0001890!2.45e-09!41;UBERON:0006240!2.45e-09!41;UBERON:0002020!7.46e-09!34;UBERON:0003528!7.46e-09!34;UBERON:0002619!9.01e-09!22;UBERON:0001893!9.54e-09!34;UBERON:0001869!1.11e-08!32;UBERON:0002791!2.66e-08!33;UBERON:0004121!2.93e-08!169;UBERON:0001017!4.35e-08!82;UBERON:0001950!6.35e-08!20;UBERON:0005743!7.61e-08!86;UBERON:0003075!8.35e-08!86;UBERON:0007284!8.35e-08!86;UBERON:0000924!1.48e-07!173;UBERON:0006601!1.48e-07!173;UBERON:0000033!2.32e-07!123;UBERON:0000480!3.33e-07!626;UBERON:0000467!5.47e-07!625;UBERON:0000956!5.77e-07!25;UBERON:0000203!5.77e-07!25;UBERON:0002346!7.95e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.74e-09;22!UBERON:0001950;7.21e-08;20!UBERON:0001869;1.76e-07;32!UBERON:0003528;2.63e-07;34!UBERON:0002020;2.63e-07;34!UBERON:0002791;2.86e-07;32!UBERON:0001893;3.10e-07;34!UBERON:0002780;4.46e-07;41!UBERON:0001890;4.46e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.08e-14,114;UBERON:0000073,1.41e-10,53;UBERON:0002616,1.41e-10,53;UBERON:0001049,1.76e-10,56;UBERON:0005068,1.76e-10,56;UBERON:0006241,1.76e-10,56;UBERON:0007135,1.76e-10,56;UBERON:0002780,3.38e-09,41;UBERON:0001890,3.38e-09,41;UBERON:0003080,3.38e-09,41;UBERON:0006240,3.38e-09,41;UBERON:0000955,4.33e-09,68;UBERON:0006238,4.33e-09,68;UBERON:0002619,8.06e-09,22;UBERON:0003528,8.57e-09,34;UBERON:0002020,8.57e-09,34;UBERON:0001893,1.10e-08,34;UBERON:0001869,1.29e-08,32;UBERON:0002791,2.42e-08,32;UBERON:0001950,5.75e-08,20;UBERON:0001017,6.79e-08,81;UBERON:0010371,1.43e-07,104;UBERON:0011216,2.60e-07,223;UBERON:0004121,5.12e-07,171;UBERON:0000924,5.12e-07,171;UBERON:0006601,5.12e-07,171;UBERON:0000956,6.82e-07,25;UBERON:0000203,6.82e-07,25 | |||
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| ||
|short_description=p3@RAI1 | |short_description=p3@RAI1 | ||
}} | }} |
Latest revision as of 21:59, 18 September 2015
Short description: | p3@RAI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENST00000353383, NM_030665, uc002grm.2_5end |
EntrezGene: | RAI1 |
HGNC: | 9834 |
UniProt: | Q7Z5J4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.08e-14 | 114 |
regional part of nervous system | 1.41e-10 | 53 |
regional part of brain | 1.41e-10 | 53 |
neural tube | 1.76e-10 | 56 |
neural rod | 1.76e-10 | 56 |
future spinal cord | 1.76e-10 | 56 |
neural keel | 1.76e-10 | 56 |
regional part of forebrain | 3.38e-09 | 41 |
forebrain | 3.38e-09 | 41 |
anterior neural tube | 3.38e-09 | 41 |
future forebrain | 3.38e-09 | 41 |
brain | 4.33e-09 | 68 |
future brain | 4.33e-09 | 68 |
regional part of cerebral cortex | 8.06e-09 | 22 |
brain grey matter | 8.57e-09 | 34 |
gray matter | 8.57e-09 | 34 |
telencephalon | 1.10e-08 | 34 |
cerebral hemisphere | 1.29e-08 | 32 |
regional part of telencephalon | 2.42e-08 | 32 |
neocortex | 5.75e-08 | 20 |
central nervous system | 6.79e-08 | 81 |
ecto-epithelium | 1.43e-07 | 104 |
organ system subdivision | 2.60e-07 | 223 |
ectoderm-derived structure | 5.12e-07 | 171 |
ectoderm | 5.12e-07 | 171 |
presumptive ectoderm | 5.12e-07 | 171 |
cerebral cortex | 6.82e-07 | 25 |
pallium | 6.82e-07 | 25 |