FFCP PHASE1:Hg19::chr17:18150710..18150748,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:18150710..18150748,- to FFCP PHASE1:Hg19::chr17:18150710..18150748,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2314 | |EntrezGene=2314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3750 | |HGNC=3750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000459958_5end | |||
|cluster_id=chr17:18150710..18150748,- | |||
|description=CAGE_peak_4_at_FLII_5end | |||
|id=chr17:18150710..18150748,- | |||
|ontology_enrichment_celltype=CL:0000066!2.07e-18!254;CL:1000507!9.92e-09!12;CL:1000494!9.92e-09!12;CL:1000449!4.11e-08!16;CL:1000497!9.43e-07!18;CL:0002518!9.43e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.62e-12;10!CL:1000494;9.62e-12;10!CL:0002322;9.52e-11;5!CL:0000082;1.66e-10;19!CL:1000449;2.40e-09;15!CL:0002368;2.10e-08;13!CL:1000497;5.08e-08;17!CL:0002518;5.08e-08;17!CL:0002681;2.17e-07;12!CL:0002584;2.17e-07;12!CL:0000239;9.65e-07;3!CL:1000615;9.65e-07;3!CL:0002306;9.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.49e-17,253;CL:1000507,5.81e-12,10;CL:1000494,5.81e-12,10;CL:0002322,5.05e-11,5;CL:0000082,1.99e-10,19;CL:1000449,1.64e-09,15;CL:0002368,3.18e-08,13;CL:1000497,3.67e-08,17;CL:0002518,3.67e-08,17;CL:0002681,1.87e-07,12;CL:0002584,1.87e-07,12;CL:0000239,8.90e-07,3;CL:1000615,8.90e-07,3;CL:0002306,8.90e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.06e-14;29 | |||
|ontology_enrichment_disease=DOID:305!9.83e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.91e-09;15!DOID:0050615;9.87e-09;16!DOID:1325;1.57e-07;7!DOID:3904;1.57e-07;7!DOID:4362;2.29e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.44e-13,106;DOID:1324,2.02e-09,15;DOID:0050687,6.64e-09,143;DOID:0050615,1.04e-08,16;DOID:1325,1.45e-07,7;DOID:3904,1.45e-07,7;DOID:4362,2.11e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000464!4.33e-15!104;UBERON:0008947!7.76e-13!38;UBERON:0003258!7.76e-13!38;UBERON:0000065!1.94e-12!53;UBERON:0001004!3.32e-11!72;UBERON:0000466!5.37e-10!126;UBERON:0007023!5.87e-10!115;UBERON:0003887!8.12e-10!21;UBERON:0000080!1.11e-09!18;UBERON:0002120!1.11e-09!18;UBERON:0004875!1.11e-09!18;UBERON:0005721!1.11e-09!18;UBERON:0005754!1.11e-09!18;UBERON:0007297!1.11e-09!18;UBERON:0004119!1.31e-09!169;UBERON:0000925!1.31e-09!169;UBERON:0006595!1.31e-09!169;UBERON:0004876!1.40e-09!20;UBERON:0003064!3.92e-09!37;UBERON:0006555!7.50e-09!17;UBERON:0005103!7.50e-09!17;UBERON:0000083!7.50e-09!17;UBERON:0009201!7.50e-09!17;UBERON:0004819!7.50e-09!17;UBERON:0006553!7.50e-09!17;UBERON:0003074!7.50e-09!17;UBERON:0003060!7.50e-09!17;UBERON:0009773!9.92e-09!12;UBERON:0001231!9.92e-09!12;UBERON:0004810!9.92e-09!12;UBERON:0000072!1.23e-08!46;UBERON:0002553!1.32e-08!70;UBERON:0000058!1.40e-08!26;UBERON:0005157!2.07e-08!51;UBERON:0003135!3.43e-08!11;UBERON:0000064!4.04e-08!219;UBERON:0004211!4.11e-08!16;UBERON:0001285!4.11e-08!16;UBERON:0007684!4.11e-08!16;UBERON:0003220!4.11e-08!16;UBERON:0004208!4.11e-08!16;UBERON:0000477!4.26e-08!286;UBERON:0000922!4.64e-08!612;UBERON:0004921!4.94e-08!129;UBERON:0004185!4.94e-08!129;UBERON:0001007!5.54e-08!155;UBERON:0001555!5.54e-08!155;UBERON:0007026!5.54e-08!155;UBERON:0001008!7.73e-08!45;UBERON:0005178!1.07e-07!34;UBERON:0002224!1.07e-07!34;UBERON:0005177!1.38e-07!107;UBERON:0000063!1.49e-07!97;UBERON:0000077!1.96e-07!130;UBERON:0003886!2.21e-07!63;UBERON:0006554!2.40e-07!44;UBERON:0005181!2.75e-07!35;UBERON:0001048!3.59e-07!168;UBERON:0002113!3.97e-07!27;UBERON:0003918!3.97e-07!27;UBERON:0005095!3.97e-07!27;UBERON:0007687!3.97e-07!27;UBERON:0003101!5.25e-07!22;UBERON:0000079!5.25e-07!22;UBERON:0001737!5.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.01e-13;44!UBERON:0000072;1.38e-12;37!UBERON:0004211;9.62e-12;10!UBERON:0009773;9.62e-12;10!UBERON:0001231;9.62e-12;10!UBERON:0004810;9.62e-12;10!UBERON:0005178;6.51e-11;34!UBERON:0002224;6.51e-11;34!UBERON:0003135;8.68e-11;11!UBERON:0004802;1.66e-10;19!UBERON:0000115;1.66e-10;19!UBERON:0002048;1.70e-10;22!UBERON:0000117;1.70e-10;22!UBERON:0000171;1.70e-10;22!UBERON:0000170;1.70e-10;22!UBERON:0005181;2.76e-10;35!UBERON:0006555;2.40e-09;15!UBERON:0004819;2.40e-09;15!UBERON:0001285;2.40e-09;15!UBERON:0007684;2.40e-09;15!UBERON:0004807;1.02e-08;22!UBERON:0001851;1.90e-07;15!UBERON:0001225;2.17e-07;12!UBERON:0008987;2.17e-07;12!UBERON:0000473;6.78e-07;8!UBERON:0006853;9.65e-07;3!UBERON:0007685;9.65e-07;3!UBERON:0004134;9.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,6.03e-16,38;UBERON:0003258,6.03e-16,38;UBERON:0000065,1.95e-13,54;UBERON:0004810,5.81e-12,10;UBERON:0005178,6.83e-12,34;UBERON:0002224,6.83e-12,34;UBERON:0005177,1.17e-11,101;UBERON:0005181,2.00e-11,35;UBERON:0003135,4.81e-11,11;UBERON:0006555,8.11e-11,16;UBERON:0004819,8.11e-11,16;UBERON:0000072,1.70e-10,47;UBERON:0004802,1.99e-10,19;UBERON:0000115,1.99e-10,19;UBERON:0002048,2.21e-10,22;UBERON:0000117,2.21e-10,22;UBERON:0000171,2.21e-10,22;UBERON:0000170,2.21e-10,22;UBERON:0005597,2.21e-10,22;UBERON:0000118,2.21e-10,22;UBERON:0004921,2.79e-10,118;UBERON:0001004,6.60e-10,74;UBERON:0004119,1.11e-09,160;UBERON:0000925,1.11e-09,160;UBERON:0006595,1.11e-09,160;UBERON:0004211,1.64e-09,15;UBERON:0009773,1.64e-09,15;UBERON:0001231,1.64e-09,15;UBERON:0001285,1.64e-09,15;UBERON:0007684,1.64e-09,15;UBERON:0004208,1.64e-09,15;UBERON:0001041,4.95e-09,87;UBERON:0009569,7.56e-09,112;UBERON:0001007,1.19e-08,145;UBERON:0001555,1.19e-08,145;UBERON:0007026,1.19e-08,145;UBERON:0005153,4.70e-08,37;UBERON:0001851,1.75e-07,15;UBERON:0001225,1.87e-07,12;UBERON:0008987,1.87e-07,12;UBERON:0002113,3.89e-07,26;UBERON:0003918,3.89e-07,26;UBERON:0011143,3.89e-07,26;UBERON:0005095,3.89e-07,26;UBERON:0007687,3.89e-07,26;UBERON:0000473,6.04e-07,8;UBERON:0006853,8.90e-07,3;UBERON:0007685,8.90e-07,3;UBERON:0004134,8.90e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,3.48900583986214,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.665188192387692,0.087834785693126,0.523916301990851,0.728590576585084,0.741568885568859,0,0,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,1.13061588384802,0.838998872419812,0.275118041940067,0.208994966536811,0.775250277507987,0.71153252537342,1.00416183829401,0.402829317109147,0,0,0,0,0.625098097988558,0.44905874525234,0.788280363383256,0,0.949265659568129,0.549605231791222,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.937285727335186,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,5.61079048196139,4.63854189125198,4.64775771478074,1.96956004529204,3.78481276313443,2.18986415445498,0,0,0,0,0,1.30137480043828,1.01150814046861,0.723033089650446,1.10293972732394,1.30727666455444,1.18635309555548,0.404493924480493,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,0.804231779293047,1.48141512253647,0.325808305310325,2.07986957055916,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.283550194484773,1.07470227243418,1.45316969256981,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0.364182336013434,0.131124414959424,4.06079651616671,2.46449078734127,0.784349769176855,2.92278449306521,2.95544560900052,0,0.340187410553031,0.215915916102139,0,0.541892875087706,1.50506932156456,1.78413391131527,7.47968408035852,2.0148727924996,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,3.47098322258054,2.11409074101617,0.510450849978337,2.12431339796655,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,2.4055528181378,0.670302275535787,1.08890984861323,0.941438007767792,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98849729306303,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,1.47787785689595,0,0.828851746593443,6.80218419206545,0,0,0,0,6.62378346299754,0,0.493217028184668,0,0,0.969332746095218,0,0,0,0,0,2.16207551742449,2.2882828526349,3.07303986298317,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.438770794307945,2.28770773389879,4.60098356119391,0.538651809526579,0,0,0,0,0,0,0,0,0,0.498635045700469,1.35357396370308,1.9606253431774,2.85296697858933,0.75901493089674,0,0,0,0,0,4.97630965539252,1.41532103205343,2.4441205797345,0,0,0,1.28062152663286,0,0.234264445725339,0,0.391329237864179,0,1.57833761139756,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.92199335066233,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0,0.0633107959558787,1.56441106187842,0.0801588202515337,1.70762395791482,0,0,0.229073192331831,0,1.1524383839052,0.124252535565433,4.47818665771911,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,4.82259445395058,2.33817042215297,1.66176135211674,0,0.77380195455795,0.0607495566580247,0,0.315222829196793,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,0.640724475406168,0.78602152549833,2.07119527673598,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,1.72022758707021,0.110929051536852,0,0,0,0,0,0.235265819698172,0.936669811613763,1.7390523433299,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,3.00218227924896,0,0,0,0,0.358177682162975,2.16161013012681,1.75427239662966,0,1.92914038270915,3.04096393175531,0,0,0,0.414775308455192,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.39879507719444,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.35378591028663,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,1.48863353516788,0,0,0,0,0.606965604236632,2.04895972216168,0.177404740325278,0,0,0.135939465953663,0,0,0,1.49136876415977,0,0,0,0,0,0.357382720883282,2.05417695252545,0,0,0,0,0.17071847709395,0,1.72090943528111,0,0,2.9637093513365,0.68732060563215,0,0,0,4.22046004545545,5.9739783241312,0,0.102662806856247,0,0.485710993059139,4.912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| ||
|short_description=p4@FLII | |||
}} | }} |
Latest revision as of 22:53, 18 September 2015
Short description: | p4@FLII |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FLII_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000459958_5end |
EntrezGene: | FLII |
HGNC: | 3750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.49e-17 | 253 |
kidney tubule cell | 5.81e-12 | 10 |
nephron tubule epithelial cell | 5.81e-12 | 10 |
embryonic stem cell | 5.05e-11 | 5 |
epithelial cell of lung | 1.99e-10 | 19 |
epithelial cell of nephron | 1.64e-09 | 15 |
respiratory epithelial cell | 3.18e-08 | 13 |
kidney cell | 3.67e-08 | 17 |
kidney epithelial cell | 3.67e-08 | 17 |
kidney cortical cell | 1.87e-07 | 12 |
renal cortical epithelial cell | 1.87e-07 | 12 |
brush border epithelial cell | 8.90e-07 | 3 |
kidney cortex tubule cell | 8.90e-07 | 3 |
epithelial cell of proximal tubule | 8.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.44e-13 | 106 |
lung cancer | 2.02e-09 | 15 |
cell type cancer | 6.64e-09 | 143 |
respiratory system cancer | 1.04e-08 | 16 |
bronchus cancer | 1.45e-07 | 7 |
bronchogenic carcinoma | 1.45e-07 | 7 |
cervical cancer | 2.11e-07 | 5 |