FFCP PHASE1:Hg19::chr3:5236696..5236710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9695 | |EntrezGene=9695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18967 | |HGNC=18967 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000492751_5end | |association_with_transcript=-80bp_to_ENST00000492751_5end | ||
|cluster_id=chr3:5236696..5236710,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_EDEM1_5end | |description=CAGE_peak_9_at_EDEM1_5end | ||
|id=chr3:5236696..5236710,+ | |id=chr3:5236696..5236710,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.20e-46!42;CL:0000860!7.79e-42!45;CL:0000738!1.45e-36!140;CL:0000766!2.90e-32!76;CL:0002031!1.02e-31!124;CL:0002087!1.84e-30!119;CL:0000557!3.80e-30!71;CL:0000839!4.21e-29!70;CL:0002009!5.23e-27!65;CL:0002194!1.32e-26!63;CL:0000576!1.32e-26!63;CL:0000040!1.32e-26!63;CL:0000559!1.32e-26!63;CL:0000988!1.37e-26!182;CL:0000037!1.75e-26!172;CL:0000566!1.75e-26!172;CL:0002032!1.43e-24!165;CL:0000837!1.43e-24!165;CL:0000763!9.64e-20!112;CL:0000049!9.64e-20!112;CL:0000134!1.87e-10!358;CL:0002320!8.45e-10!365;CL:0000219!1.08e-08!390;CL:0000080!3.54e-07!6;CL:0000063!3.74e-07!578 | |ontology_enrichment_celltype=CL:0002057!7.20e-46!42;CL:0000860!7.79e-42!45;CL:0000738!1.45e-36!140;CL:0000766!2.90e-32!76;CL:0002031!1.02e-31!124;CL:0002087!1.84e-30!119;CL:0000557!3.80e-30!71;CL:0000839!4.21e-29!70;CL:0002009!5.23e-27!65;CL:0002194!1.32e-26!63;CL:0000576!1.32e-26!63;CL:0000040!1.32e-26!63;CL:0000559!1.32e-26!63;CL:0000988!1.37e-26!182;CL:0000037!1.75e-26!172;CL:0000566!1.75e-26!172;CL:0002032!1.43e-24!165;CL:0000837!1.43e-24!165;CL:0000763!9.64e-20!112;CL:0000049!9.64e-20!112;CL:0000134!1.87e-10!358;CL:0002320!8.45e-10!365;CL:0000219!1.08e-08!390;CL:0000080!3.54e-07!6;CL:0000063!3.74e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-90;33!CL:0002057;1.25e-90;33!CL:0000473;1.65e-61;39!CL:0000234;1.65e-61;39!CL:0000576;5.99e-47;48!CL:0000766;2.26e-35;69!CL:0000763;1.34e-14;100!CL:0002087;1.28e-11;104!CL:0000097;4.92e-09;5!CL:0000738;5.04e-08;136!CL:0000767;2.16e-07;3!CL:0000081;4.17e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.73e-88,42;CL:0002057,2.73e-88,42;CL:0000473,1.75e-76,48;CL:0000234,1.75e-76,48;CL:0000766,2.21e-72,72;CL:0000839,1.44e-65,66;CL:0000557,1.65e-64,67;CL:0002194,5.98e-60,59;CL:0000576,5.98e-60,59;CL:0000040,5.98e-60,59;CL:0000559,5.98e-60,59;CL:0002009,8.14e-58,61;CL:0000763,3.44e-46,108;CL:0000049,3.44e-46,108;CL:0000738,2.54e-35,136;CL:0002031,2.42e-33,120;CL:0002032,8.74e-29,161;CL:0000837,8.74e-29,161;CL:0002087,5.37e-28,115;CL:0000988,2.42e-27,177;CL:0000037,2.67e-27,168;CL:0000134,5.91e-12,354;CL:0002320,1.41e-11,361;CL:0000219,2.99e-10,386;CL:0000034,1.16e-09,441;CL:0000723,3.57e-09,433;CL:0000097,3.76e-09,5;CL:0002028,3.76e-09,5;CL:0000048,1.26e-08,427;CL:0000767,2.42e-07,3;CL:0000081,4.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.50e-65;42!CL:0000049;1.91e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-28!102;UBERON:0003061!1.14e-28!102;UBERON:0002371!5.85e-28!80;UBERON:0002193!1.45e-25!112;UBERON:0001474!6.38e-25!86;UBERON:0004765!1.56e-23!101;UBERON:0001434!1.56e-23!101;UBERON:0002405!2.82e-21!115;UBERON:0003081!8.47e-15!216;UBERON:0002204!1.61e-10!167;UBERON:0002384!6.40e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!1.14e-28!102;UBERON:0003061!1.14e-28!102;UBERON:0002371!5.85e-28!80;UBERON:0002193!1.45e-25!112;UBERON:0001474!6.38e-25!86;UBERON:0004765!1.56e-23!101;UBERON:0001434!1.56e-23!101;UBERON:0002405!2.82e-21!115;UBERON:0003081!8.47e-15!216;UBERON:0002204!1.61e-10!167;UBERON:0002384!6.40e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-56,76;UBERON:0001474,1.18e-51,82;UBERON:0004765,1.57e-46,90;UBERON:0002390,3.53e-45,98;UBERON:0003061,3.53e-45,98;UBERON:0002405,7.81e-45,93;UBERON:0001434,2.89e-41,100;UBERON:0002193,2.06e-40,108;UBERON:0002204,3.86e-22,167;UBERON:0003081,7.33e-20,203;UBERON:0000926,2.84e-11,315;UBERON:0004120,2.84e-11,315;UBERON:0006603,2.84e-11,315;UBERON:0002384,4.59e-11,371 | |||
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|short_description=p9@EDEM1 | |short_description=p9@EDEM1 | ||
}} | }} |
Latest revision as of 23:27, 18 September 2015
Short description: | p9@EDEM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EDEM1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -80bp_to_ENST00000492751_5end |
EntrezGene: | EDEM1 |
HGNC: | 18967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.39e-56 | 76 |
bone element | 1.18e-51 | 82 |
skeletal element | 1.57e-46 | 90 |
hematopoietic system | 3.53e-45 | 98 |
blood island | 3.53e-45 | 98 |
immune system | 7.81e-45 | 93 |
skeletal system | 2.89e-41 | 100 |
hemolymphoid system | 2.06e-40 | 108 |
musculoskeletal system | 3.86e-22 | 167 |
lateral plate mesoderm | 7.33e-20 | 203 |
mesoderm | 2.84e-11 | 315 |
mesoderm-derived structure | 2.84e-11 | 315 |
presumptive mesoderm | 2.84e-11 | 315 |
connective tissue | 4.59e-11 | 371 |