FFCP PHASE1:Hg19::chr11:6340994..6341012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112464 | |EntrezGene=112464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9400 | |HGNC=9400 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=279bp_to_ENST00000532354_5end | |association_with_transcript=279bp_to_ENST00000532354_5end | ||
|cluster_id=chr11:6340994..6341012,- | |||
|coexpression_cluster_id=C3180 | |||
|description=CAGE_peak_2_at_PRKCDBP_5end | |description=CAGE_peak_2_at_PRKCDBP_5end | ||
|id=chr11:6340994..6341012,- | |id=chr11:6340994..6341012,- | ||
|ontology_enrichment_celltype=CL:0000055!3.18e-27!180;CL:0000222!3.31e-18!119;CL:0000057!5.03e-17!75;CL:0000183!1.19e-15!59;CL:0000680!2.98e-14!57;CL:0000056!2.98e-14!57;CL:0000355!2.98e-14!57;CL:0000187!1.94e-13!54;CL:0000220!3.43e-11!246;CL:0002321!5.76e-11!248;CL:0000393!1.64e-10!60;CL:0000211!1.64e-10!60;CL:0000192!4.45e-10!42;CL:0000514!4.45e-10!42;CL:0000136!1.08e-09!15 | |ontology_enrichment_celltype=CL:0000055!3.18e-27!180;CL:0000222!3.31e-18!119;CL:0000057!5.03e-17!75;CL:0000183!1.19e-15!59;CL:0000680!2.98e-14!57;CL:0000056!2.98e-14!57;CL:0000355!2.98e-14!57;CL:0000187!1.94e-13!54;CL:0000220!3.43e-11!246;CL:0002321!5.76e-11!248;CL:0000393!1.64e-10!60;CL:0000211!1.64e-10!60;CL:0000192!4.45e-10!42;CL:0000514!4.45e-10!42;CL:0000136!1.08e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.76e-09;13!CL:0000187;8.24e-09;55!CL:0000192;1.40e-07;43!CL:0000057;1.59e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.17e-19,121;CL:0000057,9.24e-18,76;CL:0000680,4.30e-15,58;CL:0000056,4.30e-15,58;CL:0000355,4.30e-15,58;CL:0000187,3.10e-14,55;CL:0002321,9.56e-11,250;CL:0000192,1.06e-10,43;CL:0000514,1.06e-10,43;CL:0000393,1.16e-10,61;CL:0000211,1.16e-10,61;CL:0000136,4.18e-10,15;CL:0000213,7.85e-07,58;CL:0000215,7.85e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000355;2.17e-08;58!CL:0000514;1.40e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.56e-17!83;UBERON:0002329!3.56e-17!83;UBERON:0003077!3.56e-17!83;UBERON:0003059!3.56e-17!83;UBERON:0007282!3.56e-17!83;UBERON:0009618!3.56e-17!83;UBERON:0007285!3.56e-17!83;UBERON:0004290!3.38e-16!70;UBERON:0005256!4.84e-15!143;UBERON:0000486!5.50e-14!82;UBERON:0003104!1.17e-13!238;UBERON:0009142!1.17e-13!238;UBERON:0002385!1.39e-13!63;UBERON:0001015!1.39e-13!63;UBERON:0000383!1.39e-13!63;UBERON:0001134!1.78e-13!61;UBERON:0002036!1.78e-13!61;UBERON:0003082!1.78e-13!61;UBERON:0002049!6.55e-13!79;UBERON:0007798!6.55e-13!79;UBERON:0002100!6.73e-13!216;UBERON:0000481!8.94e-13!347;UBERON:0001009!1.75e-12!113;UBERON:0004872!2.39e-12!84;UBERON:0004535!6.56e-12!110;UBERON:0003914!1.50e-10!118;UBERON:0000926!3.64e-10!448;UBERON:0004120!3.64e-10!448;UBERON:0006603!3.64e-10!448;UBERON:0000475!6.05e-10!365;UBERON:0000468!2.03e-09!659;UBERON:0000119!3.90e-09!312;UBERON:0000055!4.61e-09!69;UBERON:0001981!7.05e-09!60;UBERON:0007500!7.05e-09!60;UBERON:0004537!7.05e-09!60;UBERON:0006965!7.05e-09!60;UBERON:0000477!7.32e-09!286;UBERON:0000483!1.26e-08!309;UBERON:0000490!2.23e-08!138;UBERON:0003102!3.81e-08!95;UBERON:0001013!1.38e-07!14;UBERON:0001737!1.39e-07!9;UBERON:0007100!2.99e-07!27;UBERON:0000467!3.38e-07!625;UBERON:0000480!5.14e-07!626;UBERON:0002199!8.45e-07!45;UBERON:0002416!8.45e-07!45;UBERON:0003103!9.30e-07!69 | |ontology_enrichment_uberon=UBERON:0000914!3.56e-17!83;UBERON:0002329!3.56e-17!83;UBERON:0003077!3.56e-17!83;UBERON:0003059!3.56e-17!83;UBERON:0007282!3.56e-17!83;UBERON:0009618!3.56e-17!83;UBERON:0007285!3.56e-17!83;UBERON:0004290!3.38e-16!70;UBERON:0005256!4.84e-15!143;UBERON:0000486!5.50e-14!82;UBERON:0003104!1.17e-13!238;UBERON:0009142!1.17e-13!238;UBERON:0002385!1.39e-13!63;UBERON:0001015!1.39e-13!63;UBERON:0000383!1.39e-13!63;UBERON:0001134!1.78e-13!61;UBERON:0002036!1.78e-13!61;UBERON:0003082!1.78e-13!61;UBERON:0002049!6.55e-13!79;UBERON:0007798!6.55e-13!79;UBERON:0002100!6.73e-13!216;UBERON:0000481!8.94e-13!347;UBERON:0001009!1.75e-12!113;UBERON:0004872!2.39e-12!84;UBERON:0004535!6.56e-12!110;UBERON:0003914!1.50e-10!118;UBERON:0000926!3.64e-10!448;UBERON:0004120!3.64e-10!448;UBERON:0006603!3.64e-10!448;UBERON:0000475!6.05e-10!365;UBERON:0000468!2.03e-09!659;UBERON:0000119!3.90e-09!312;UBERON:0000055!4.61e-09!69;UBERON:0001981!7.05e-09!60;UBERON:0007500!7.05e-09!60;UBERON:0004537!7.05e-09!60;UBERON:0006965!7.05e-09!60;UBERON:0000477!7.32e-09!286;UBERON:0000483!1.26e-08!309;UBERON:0000490!2.23e-08!138;UBERON:0003102!3.81e-08!95;UBERON:0001013!1.38e-07!14;UBERON:0001737!1.39e-07!9;UBERON:0007100!2.99e-07!27;UBERON:0000467!3.38e-07!625;UBERON:0000480!5.14e-07!626;UBERON:0002199!8.45e-07!45;UBERON:0002416!8.45e-07!45;UBERON:0003103!9.30e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.59e-08;14!UBERON:0001737;6.89e-08;9!UBERON:0001557;6.89e-08;9!UBERON:0002384;6.11e-07;198!UBERON:0007100;6.32e-07;25 | |||
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| ||
|short_description=p2@PRKCDBP | |short_description=p2@PRKCDBP | ||
}} | }} |
Latest revision as of 23:41, 18 September 2015
Short description: | p2@PRKCDBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKCDBP_5end |
Coexpression cluster: | C3180_Adipocyte_Mesenchymal_Hep2_cord_mesenchymal_Smooth_Fibroblast |
Association with transcript: | 279bp_to_ENST00000532354_5end |
EntrezGene: | PRKCDBP |
HGNC: | 9400 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.17e-19 | 121 |
fibroblast | 9.24e-18 | 76 |
muscle precursor cell | 4.30e-15 | 58 |
myoblast | 4.30e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-15 | 58 |
muscle cell | 3.10e-14 | 55 |
embryonic cell | 9.56e-11 | 250 |
smooth muscle cell | 1.06e-10 | 43 |
smooth muscle myoblast | 1.06e-10 | 43 |
electrically responsive cell | 1.16e-10 | 61 |
electrically active cell | 1.16e-10 | 61 |
fat cell | 4.18e-10 | 15 |
lining cell | 7.85e-07 | 58 |
barrier cell | 7.85e-07 | 58 |