FFCP PHASE1:Hg19::chr3:52444651..52444697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51533 | |EntrezGene=51533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18458 | |HGNC=18458 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWX1 | |UniProt=Q9BWX1 | ||
|association_with_transcript=0bp_to_ENST00000327906_5end | |association_with_transcript=0bp_to_ENST00000327906_5end | ||
|cluster_id=chr3:52444651..52444697,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_PHF7_5end | |description=CAGE_peak_1_at_PHF7_5end | ||
|id=chr3:52444651..52444697,+ | |id=chr3:52444651..52444697,+ | ||
|ontology_enrichment_celltype=CL:0000037!9.39e-27!172;CL:0000566!9.39e-27!172;CL:0000988!6.45e-25!182;CL:0002032!1.32e-24!165;CL:0000837!1.32e-24!165;CL:0000763!9.57e-15!112;CL:0000049!9.57e-15!112;CL:0002031!1.04e-14!124;CL:0000738!9.67e-14!140;CL:0002087!2.77e-12!119;CL:0000838!1.02e-09!52;CL:0000542!1.18e-09!53;CL:0000051!1.18e-09!53 | |ontology_enrichment_celltype=CL:0000037!9.39e-27!172;CL:0000566!9.39e-27!172;CL:0000988!6.45e-25!182;CL:0002032!1.32e-24!165;CL:0000837!1.32e-24!165;CL:0000763!9.57e-15!112;CL:0000049!9.57e-15!112;CL:0002031!1.04e-14!124;CL:0000738!9.67e-14!140;CL:0002087!2.77e-12!119;CL:0000838!1.02e-09!52;CL:0000542!1.18e-09!53;CL:0000051!1.18e-09!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.41e-29,168;CL:0000988,3.14e-27,177;CL:0002032,8.84e-27,161;CL:0000837,8.84e-27,161;CL:0000763,9.86e-17,108;CL:0000049,9.86e-17,108;CL:0002031,1.89e-16,120;CL:0000738,2.19e-15,136;CL:0002087,7.29e-14,115;CL:0000838,1.02e-09,52;CL:0000542,1.19e-09,53;CL:0000051,1.19e-09,53;CL:0000839,9.07e-08,66;CL:0000557,2.80e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!3.09e-19!39;DOID:2531!6.30e-19!51;DOID:0060083!6.30e-19!51;DOID:8692!1.11e-15!31 | |ontology_enrichment_disease=DOID:1240!3.09e-19!39;DOID:2531!6.30e-19!51;DOID:0060083!6.30e-19!51;DOID:8692!1.11e-15!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.70e-15;31!DOID:1240;4.16e-15;39!DOID:2531;4.76e-12;51!DOID:0060083;4.76e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.86e-19,39;DOID:2531,5.84e-19,51;DOID:0060083,5.84e-19,51;DOID:8692,1.04e-15,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-18!115;UBERON:0001049!1.76e-07!57;UBERON:0005068!1.76e-07!57;UBERON:0006241!1.76e-07!57;UBERON:0007135!1.76e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.92e-18!115;UBERON:0001049!1.76e-07!57;UBERON:0005068!1.76e-07!57;UBERON:0006241!1.76e-07!57;UBERON:0007135!1.76e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-18,114;UBERON:0002390,1.22e-07,98;UBERON:0003061,1.22e-07,98;UBERON:0001049,1.95e-07,56;UBERON:0005068,1.95e-07,56;UBERON:0006241,1.95e-07,56;UBERON:0007135,1.95e-07,56;UBERON:0000073,6.78e-07,53;UBERON:0002616,6.78e-07,53 | |||
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| ||
|short_description=p1@PHF7 | |short_description=p1@PHF7 | ||
}} | }} |
Latest revision as of 23:42, 18 September 2015
Short description: | p1@PHF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF7_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000327906_5end |
EntrezGene: | PHF7 |
HGNC: | 18458 |
UniProt: | Q9BWX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.41e-29 | 168 |
hematopoietic cell | 3.14e-27 | 177 |
hematopoietic oligopotent progenitor cell | 8.84e-27 | 161 |
hematopoietic multipotent progenitor cell | 8.84e-27 | 161 |
myeloid cell | 9.86e-17 | 108 |
common myeloid progenitor | 9.86e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 1.89e-16 | 120 |
leukocyte | 2.19e-15 | 136 |
nongranular leukocyte | 7.29e-14 | 115 |
lymphoid lineage restricted progenitor cell | 1.02e-09 | 52 |
lymphocyte | 1.19e-09 | 53 |
common lymphoid progenitor | 1.19e-09 | 53 |
myeloid lineage restricted progenitor cell | 9.07e-08 | 66 |
granulocyte monocyte progenitor cell | 2.80e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.06e-18 | 114 |
hematopoietic system | 1.22e-07 | 98 |
blood island | 1.22e-07 | 98 |
neural tube | 1.95e-07 | 56 |
neural rod | 1.95e-07 | 56 |
future spinal cord | 1.95e-07 | 56 |
neural keel | 1.95e-07 | 56 |
regional part of nervous system | 6.78e-07 | 53 |
regional part of brain | 6.78e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.86e-19 | 39 |
hematologic cancer | 5.84e-19 | 51 |
immune system cancer | 5.84e-19 | 51 |
myeloid leukemia | 1.04e-15 | 31 |