FFCP PHASE1:Hg19::chr15:74218973..74218999,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:74218973..74218999,+ to FFCP PHASE1:Hg19::chr15:74218973..74218999,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4016 | |EntrezGene=4016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6665 | |HGNC=6665 | ||
|TSSclassifier=strong | |||
|UniProt=Q08397 | |UniProt=Q08397 | ||
|association_with_transcript=170bp_to_ENST00000395162_5end | |||
|cluster_id=chr15:74218973..74218999,+ | |||
|description=CAGE_peak_2_at_LOXL1_5end | |||
|id=chr15:74218973..74218999,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.81e-50!180;CL:0000057!4.22e-27!75;CL:0000680!1.03e-20!57;CL:0000056!1.03e-20!57;CL:0000355!1.03e-20!57;CL:0000183!1.25e-19!59;CL:0000187!8.19e-19!54;CL:0000393!1.76e-16!60;CL:0000211!1.76e-16!60;CL:0000192!1.89e-15!42;CL:0000514!1.89e-15!42;CL:0000359!7.48e-14!32;CL:0002620!5.92e-11!23;CL:0000048!8.34e-11!430;CL:0000723!3.31e-10!436;CL:0000222!5.24e-10!119;CL:0000034!1.58e-09!444;CL:0000144!1.99e-09!625;CL:0002371!6.77e-09!591;CL:0000548!9.97e-08!679;CL:0000004!9.97e-08!679;CL:0000255!9.97e-08!679;CL:0000012!2.80e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.82e-15;32!CL:0000192;2.68e-12;43!CL:0002620;2.77e-12;23!CL:0000187;7.32e-11;55!CL:0000057;1.02e-10;73!CL:0002320;5.60e-09;188!CL:0000393;1.04e-08;61!CL:0000211;1.04e-08;61!CL:0002334;8.76e-08;12!CL:0000134;3.62e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.53e-28,76;CL:0000680,5.54e-22,58;CL:0000056,5.54e-22,58;CL:0000355,5.54e-22,58;CL:0000187,9.08e-20,55;CL:0000048,1.82e-17,427;CL:0000393,9.78e-17,61;CL:0000211,9.78e-17,61;CL:0000723,2.04e-16,433;CL:0000192,2.56e-16,43;CL:0000514,2.56e-16,43;CL:0000359,7.99e-16,32;CL:0000034,4.42e-15,441;CL:0002620,4.32e-12,23;CL:0000222,2.74e-11,121;CL:0002334,9.82e-08,12;CL:0002320,1.22e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;2.68e-12;43!CL:0000355;2.15e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.22e-23!83;UBERON:0002329!7.22e-23!83;UBERON:0003077!7.22e-23!83;UBERON:0003059!7.22e-23!83;UBERON:0007282!7.22e-23!83;UBERON:0009618!7.22e-23!83;UBERON:0007285!7.22e-23!83;UBERON:0004290!2.58e-21!70;UBERON:0002385!1.77e-18!63;UBERON:0001015!1.77e-18!63;UBERON:0000383!1.77e-18!63;UBERON:0001134!2.63e-18!61;UBERON:0002036!2.63e-18!61;UBERON:0003082!2.63e-18!61;UBERON:0000486!6.07e-17!82;UBERON:0005256!3.91e-14!143;UBERON:0002100!1.74e-10!216;UBERON:0000475!3.46e-10!365;UBERON:0004573!5.51e-09!33;UBERON:0004571!5.51e-09!33;UBERON:0001637!5.77e-09!42;UBERON:0003509!5.77e-09!42;UBERON:0004572!5.77e-09!42;UBERON:0002199!6.72e-09!45;UBERON:0002416!6.72e-09!45;UBERON:0002097!4.11e-08!40;UBERON:0003102!4.84e-08!95;UBERON:0002049!3.04e-07!79;UBERON:0007798!3.04e-07!79;UBERON:0004872!3.99e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.58e-10;33!UBERON:0004571;3.58e-10;33!UBERON:0002384;3.81e-09;198!UBERON:0001637;2.95e-08;42!UBERON:0003509;2.95e-08;42!UBERON:0004572;2.95e-08;42!UBERON:0002385;1.68e-07;31!UBERON:0001015;1.68e-07;31!UBERON:0000383;1.68e-07;31!UBERON:0002204;2.59e-07;70!UBERON:0002097;3.13e-07;41!UBERON:0002199;5.91e-07;46!UBERON:0002416;5.91e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.40e-22,71;UBERON:0003059,3.40e-22,71;UBERON:0007282,3.40e-22,71;UBERON:0004290,3.40e-22,71;UBERON:0009618,3.40e-22,71;UBERON:0007524,3.86e-22,73;UBERON:0003077,1.42e-21,72;UBERON:0007285,1.42e-21,72;UBERON:0001134,2.72e-19,62;UBERON:0002036,2.72e-19,62;UBERON:0003082,2.72e-19,62;UBERON:0007503,3.95e-19,78;UBERON:0002385,5.16e-19,64;UBERON:0001015,5.16e-19,64;UBERON:0000383,5.16e-19,64;UBERON:0000486,8.95e-19,83;UBERON:0005256,4.04e-12,122;UBERON:0001637,7.83e-12,42;UBERON:0003509,7.83e-12,42;UBERON:0004572,7.83e-12,42;UBERON:0004573,1.60e-11,33;UBERON:0004571,1.60e-11,33;UBERON:0003104,1.64e-11,160;UBERON:0009142,1.64e-11,160;UBERON:0002199,2.29e-10,46;UBERON:0002416,2.29e-10,46;UBERON:0002049,1.64e-09,78;UBERON:0007798,1.64e-09,78;UBERON:0002097,2.78e-09,41;UBERON:0004872,1.99e-08,83;UBERON:0002384,3.28e-08,371;UBERON:0003102,3.88e-08,99;UBERON:0001009,4.29e-08,112;UBERON:0004535,1.35e-07,109;UBERON:0000490,1.69e-07,148;UBERON:0007500,2.27e-07,59;UBERON:0001981,2.27e-07,59;UBERON:0004537,2.27e-07,59;UBERON:0006965,2.27e-07,59;UBERON:0002100,4.69e-07,199 | |||
|phase1_expression=10.9007027562334,7.27941781229343,6.3429481843187,11.0080628188443,1.34088328328186,9.59572376510406,0,15.1612769622439,4.17897005119742,0,0,0.218441372130172,0,26.8572985923301,43.7444535960849,4.03395087871065,2.41077811209591,5.84248072309899,3.90346239032406,14.8976480272913,21.4200725806466,11.5978246946892,2.28988789704845,4.79060487755095,3.89182182743889,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,4.69490601792545,0.511450247374121,63.6132908196837,39.6056949402353,45.4818069536986,2.3858578411533,10.705967146658,1.89069634328136,4.43458794925128,4.3917392846563,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,23.8546536813753,17.6016411213766,17.0807843249052,43.0254931123221,17.7334191099179,13.4562624034154,5.33744978648525,12.333377420858,2.8008993185979,0.942974704487816,1.9615428373615,16.6493170409425,17.86145365888,1.40592859100278,4.05808099879417,2.85235910772225,4.03511437489863,2.11382097558777,1.13311061057692,0.842704840213491,10.0035543914898,5.52754427902956,11.882464835213,8.31602000097437,7.66527480763526,10.0117749813183,12.9351265526923,1.68336113954066,3.62843707628696,4.98715407871529,12.7303510055443,20.5346823185343,9.314759652209,3.74326204428069,40.0038887586162,19.4337223824896,18.2261434997223,32.4098383771154,6.08009922506789,22.930008064061,28.2897621624017,85.2320477818394,28.0618574864252,22.9714734562144,13.8074847963449,14.2248530000554,50.4113621373592,20.8556843331215,15.0908927156334,0,0,0,0,0,0.116193942869518,0.621966330092223,0.504641701751257,0,184.610448149183,237.999147131368,44.2031748327938,18.1103491932472,39.7033714918272,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,9.81692416624121,0.4115740113314,4.41026134156626,0,0,0,0,0,1.54411029268673,0.329250856225877,0,0,0,0.325808305310325,2.07986957055916,1.44331342025273,1.97081688457631,6.10525210026273,0.288732895522148,0,0,8.69224837755203,9.4433477830436,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0.308482478109971,0,0,3.36393253036082,3.48768055066624,2.56684000373325,2.84397774667111,50.0719024192635,0.845302752556,3.72313363218819,7.28052058379563,3.34369586540785,2.83698264046557,8.79193190753128,1.28680194292333,0,0.823240336780769,2.60588947434988,0.710783897485092,0,1.50719688529793,2.61460037580088,1.89948683245908,0,0,0,57.2703404624882,25.2696258835051,28.5273810081437,28.3771361068455,32.670735285511,35.991253611219,0,0,0,0,1.27047312111232,0,0.773288812777695,0,1.27587750330633,2.24702107184155,0,4.14415513436035,18.5264152495901,29.5100607425209,12.4781910901878,25.7883868298201,65.126580910964,41.7911399839927,74.2676571053802,65.305303640915,61.4000260951159,16.5556914068008,19.2625423575277,24.5210994160465,9.90473204936145,157.619931757506,30.5397647191662,0,0,0,0,0,1.20956117331872,17.1194387394956,13.1977297027734,14.5943249105198,16.4018111047297,14.3278029738677,14.7985607452119,11.8734453155993,4.47208112027701,10.2985800681614,9.19824147354662,6.23105315020345,7.08883308605751,0,0.200506470303285,0.0920809889358963,4.01850568576124,8.19410256030227,6.81846957789005,0,0.231046011313244,2.35304930753057,2.92278449306521,0.527758144464379,0,0,0.215915916102139,0,0.541892875087706,6.02027728625824,0,0,1.79099803777743,0,0,2.82095137628028,6.88830755969382,6.83294628795036,0.206082023295445,0.366277859273374,0.165018999841176,0.574265537996172,1.30012049207304,6.42735719376638,4.8335359146061,7.70243085573222,6.14014698904518,2.48105830472155,2.57808587683857,9.42608510442485,2.55679882248303,3.29418531892928,0.165284915360978,0.192190067365106,0,0.10115778085555,18.5938219718914,65.4809681407731,16.0318572136938,21.8703841925023,15.4368748791936,15.6587938573513,8.15426564057248,8.1581185442935,16.747126621185,26.8922511010917,5.14701523594327,31.7313261226054,16.261681545289,17.8193818838525,3.13979456079692,1.2591072030832,0.54907405947211,0.942499218765491,17.5898758968785,60.2339220457431,5.47635993110675,0.48763373908959,11.6982475023017,9.50851320810799,2.72999822815972,1.55545975149084,15.821136326834,10.4759415273764,20.5666082324778,26.7455040004795,16.2057149594673,1.9676842561399,3.04365565444056,6.8161169581945,8.45086807596724,0.286822704408103,1.17898849215745,2.1400263088875,4.96665489698837,72.1988112718011,51.6992981947046,2.65631221636001,1.04980416073495,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.586032717087576,0,0,3.12549761487054,0.47748896947538,0.296964680832639,0,0,0,0.333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| ||
|short_description=p2@LOXL1 | |||
}} | }} |
Latest revision as of 23:58, 18 September 2015
Short description: | p2@LOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 170bp_to_ENST00000395162_5end |
EntrezGene: | LOXL1 |
HGNC: | 6665 |
UniProt: | Q08397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.53e-28 | 76 |
muscle precursor cell | 5.54e-22 | 58 |
myoblast | 5.54e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.54e-22 | 58 |
muscle cell | 9.08e-20 | 55 |
multi fate stem cell | 1.82e-17 | 427 |
electrically responsive cell | 9.78e-17 | 61 |
electrically active cell | 9.78e-17 | 61 |
somatic stem cell | 2.04e-16 | 433 |
smooth muscle cell | 2.56e-16 | 43 |
smooth muscle myoblast | 2.56e-16 | 43 |
vascular associated smooth muscle cell | 7.99e-16 | 32 |
stem cell | 4.42e-15 | 441 |
skin fibroblast | 4.32e-12 | 23 |
mesodermal cell | 2.74e-11 | 121 |
preadipocyte | 9.82e-08 | 12 |
connective tissue cell | 1.22e-07 | 361 |