FFCP PHASE1:Hg19::chr2:96926313..96926334,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:96926313..96926334,-
|short_description=p10@TMEM127
|description=CAGE_peak_10_at_TMEM127_5end
|association_with_transcript=0bp_to_ENST00000435268_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55654 | |EntrezGene=55654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26038 | |HGNC=26038 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4H2 | |UniProt=C9J4H2 | ||
|association_with_transcript=0bp_to_ENST00000435268_5end | |||
|cluster_id=chr2:96926313..96926334,- | |||
|description=CAGE_peak_10_at_TMEM127_5end | |||
|id=chr2:96926313..96926334,- | |||
|ontology_enrichment_celltype=CL:0002194!6.95e-24!63;CL:0000576!6.95e-24!63;CL:0000040!6.95e-24!63;CL:0000559!6.95e-24!63;CL:0000839!9.54e-24!70;CL:0000557!3.36e-23!71;CL:0002009!1.03e-22!65;CL:0000766!6.90e-22!76;CL:0002057!1.27e-15!42;CL:0000860!5.17e-15!45;CL:0000763!5.38e-13!112;CL:0000049!5.38e-13!112;CL:0002087!9.39e-11!119;CL:0002031!2.03e-10!124;CL:0000738!7.32e-10!140;CL:0000988!1.92e-07!182;CL:0000037!8.61e-07!172;CL:0000566!8.61e-07!172;CL:0002032!9.39e-07!165;CL:0000837!9.39e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.78e-43;6!CL:0000473;6.42e-14;39!CL:0000234;6.42e-14;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.75e-43,6;CL:0002194,3.92e-15,59;CL:0000576,3.92e-15,59;CL:0000040,3.92e-15,59;CL:0000559,3.92e-15,59;CL:0002009,1.42e-14,61;CL:0000473,2.43e-13,48;CL:0000234,2.43e-13,48;CL:0000839,2.52e-13,66;CL:0000557,4.26e-13,67;CL:0000766,4.74e-12,72;CL:0000763,2.32e-07,108;CL:0000049,2.32e-07,108;CL:0002087,8.66e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.58e-09;1!UBERON:0010227;7.54e-09;1!UBERON:0009143;2.05e-08;1!UBERON:0005062;5.23e-08;4!UBERON:0007284;5.23e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.50e-22!102;UBERON:0003061!9.50e-22!102;UBERON:0002193!3.39e-20!112;UBERON:0002371!6.29e-19!80;UBERON:0001474!1.53e-17!86;UBERON:0002405!2.66e-15!115;UBERON:0004765!4.72e-15!101;UBERON:0001434!4.72e-15!101;UBERON:0007023!3.55e-10!115;UBERON:0002204!6.77e-08!167;UBERON:0003081!9.37e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.16e-10;3!UBERON:0000946;2.16e-10;3!UBERON:0007100;6.49e-10;25!UBERON:0002079;7.54e-09;1!UBERON:0002135;2.05e-08;1!UBERON:0002146;2.05e-08;1!UBERON:0005623;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.60e-11,76;UBERON:0003978,1.28e-10,3;UBERON:0009751,1.28e-10,3;UBERON:0000946,1.28e-10,3;UBERON:0002523,1.28e-10,3;UBERON:0005983,1.28e-10,3;UBERON:0002165,1.28e-10,3;UBERON:0002062,1.28e-10,3;UBERON:0007280,1.28e-10,3;UBERON:0001474,2.45e-10,82;UBERON:0004765,3.07e-09,90;UBERON:0007100,3.13e-09,27;UBERON:0002079,6.03e-09,1;UBERON:0002405,7.10e-09,93;UBERON:0002146,1.18e-08,1;UBERON:0005623,1.18e-08,1;UBERON:0002135,1.59e-08,1;UBERON:0002390,2.56e-08,98;UBERON:0003061,2.56e-08,98;UBERON:0001434,4.12e-08,100;UBERON:0002193,2.32e-07,108 | |||
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| ||
|short_description=p10@TMEM127 | |||
}} | }} |
Latest revision as of 00:34, 19 September 2015
Short description: | p10@TMEM127 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TMEM127_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435268_5end |
EntrezGene: | TMEM127 |
HGNC: | 26038 |
UniProt: | C9J4H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.75e-43 | 6 |
monopoietic cell | 3.92e-15 | 59 |
monocyte | 3.92e-15 | 59 |
monoblast | 3.92e-15 | 59 |
promonocyte | 3.92e-15 | 59 |
macrophage dendritic cell progenitor | 1.42e-14 | 61 |
defensive cell | 2.43e-13 | 48 |
phagocyte | 2.43e-13 | 48 |
myeloid lineage restricted progenitor cell | 2.52e-13 | 66 |
granulocyte monocyte progenitor cell | 4.26e-13 | 67 |
myeloid leukocyte | 4.74e-12 | 72 |
myeloid cell | 2.32e-07 | 108 |
common myeloid progenitor | 2.32e-07 | 108 |
nongranular leukocyte | 8.66e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.60e-11 | 76 |
valve | 1.28e-10 | 3 |
cardiac mesenchyme | 1.28e-10 | 3 |
cardial valve | 1.28e-10 | 3 |
tunica intima | 1.28e-10 | 3 |
heart layer | 1.28e-10 | 3 |
endocardium | 1.28e-10 | 3 |
endocardial cushion | 1.28e-10 | 3 |
presumptive endocardium | 1.28e-10 | 3 |
bone element | 2.45e-10 | 82 |
skeletal element | 3.07e-09 | 90 |
primary circulatory organ | 3.13e-09 | 27 |
left cardiac atrium | 6.03e-09 | 1 |
immune system | 7.10e-09 | 93 |
pulmonary valve | 1.18e-08 | 1 |
semi-lunar valve | 1.18e-08 | 1 |
mitral valve | 1.59e-08 | 1 |
hematopoietic system | 2.56e-08 | 98 |
blood island | 2.56e-08 | 98 |
skeletal system | 4.12e-08 | 100 |
hemolymphoid system | 2.32e-07 | 108 |