FFCP PHASE1:Hg19::chr2:9695686..9695710,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:9695686..9695710,-
|short_description=p7@ADAM17
|description=CAGE_peak_7_at_ADAM17_5end
|association_with_transcript=192bp_to_ENST00000478059_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6868 | |EntrezGene=6868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |HGNC=195 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=192bp_to_ENST00000478059_5end | |||
|cluster_id=chr2:9695686..9695710,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_7_at_ADAM17_5end | |||
|id=chr2:9695686..9695710,- | |||
|ontology_enrichment_celltype=CL:0002057!2.77e-27!42;CL:0000860!1.43e-24!45;CL:0000766!3.58e-24!76;CL:0002009!1.05e-23!65;CL:0002194!2.16e-23!63;CL:0000576!2.16e-23!63;CL:0000040!2.16e-23!63;CL:0000559!2.16e-23!63;CL:0000557!7.22e-23!71;CL:0000839!5.50e-22!70;CL:0000738!1.66e-15!140;CL:0000763!2.24e-15!112;CL:0000049!2.24e-15!112;CL:0002087!3.99e-15!119;CL:0002031!1.07e-13!124;CL:0000988!2.53e-12!182;CL:0000037!1.37e-11!172;CL:0000566!1.37e-11!172;CL:0002032!7.49e-11!165;CL:0000837!7.49e-11!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-47;33!CL:0002057;1.27e-47;33!CL:0000473;9.49e-44;39!CL:0000234;9.49e-44;39!CL:0000576;8.99e-29;48!CL:0000766;3.67e-25;69!CL:0000763;4.21e-11;100!CL:0002087;7.81e-10;104!CL:0000738;7.54e-09;136!CL:0000235;5.02e-07;6!CL:0002393;6.67e-07;6!CL:0002397;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.24e-58,48;CL:0000234,2.24e-58,48;CL:0000860,1.28e-52,42;CL:0002057,1.28e-52,42;CL:0000766,7.68e-47,72;CL:0002194,3.58e-46,59;CL:0000576,3.58e-46,59;CL:0000040,3.58e-46,59;CL:0000559,3.58e-46,59;CL:0000839,4.19e-46,66;CL:0000557,2.19e-45,67;CL:0002009,1.35e-44,61;CL:0000763,1.99e-30,108;CL:0000049,1.99e-30,108;CL:0002031,4.50e-27,120;CL:0000738,3.12e-26,136;CL:0002087,2.63e-25,115;CL:0002032,1.02e-21,161;CL:0000837,1.02e-21,161;CL:0000988,1.21e-21,177;CL:0000037,1.08e-20,168;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000235,4.80e-07,6;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.12e-37;42!CL:0000049;1.52e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.73e-20!102;UBERON:0003061!3.73e-20!102;UBERON:0002371!1.57e-18!80;UBERON:0002193!1.85e-18!112;UBERON:0001474!3.49e-17!86;UBERON:0002405!4.14e-14!115;UBERON:0004765!1.98e-12!101;UBERON:0001434!1.98e-12!101;UBERON:0003081!1.74e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.30e-40,76;UBERON:0001474,1.11e-36,82;UBERON:0004765,3.28e-33,90;UBERON:0002405,4.64e-32,93;UBERON:0002390,2.69e-30,98;UBERON:0003061,2.69e-30,98;UBERON:0001434,1.22e-29,100;UBERON:0002193,2.96e-27,108;UBERON:0002204,1.18e-16,167;UBERON:0003081,7.67e-15,203;UBERON:0002384,1.10e-08,371;UBERON:0000926,1.88e-08,315;UBERON:0004120,1.88e-08,315;UBERON:0006603,1.88e-08,315 | |||
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| ||
|short_description=p7@ADAM17 | |||
}} | }} |
Latest revision as of 00:49, 19 September 2015
Short description: | p7@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ADAM17_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 192bp_to_ENST00000478059_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.24e-58 | 48 |
phagocyte | 2.24e-58 | 48 |
classical monocyte | 1.28e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-52 | 42 |
myeloid leukocyte | 7.68e-47 | 72 |
monopoietic cell | 3.58e-46 | 59 |
monocyte | 3.58e-46 | 59 |
monoblast | 3.58e-46 | 59 |
promonocyte | 3.58e-46 | 59 |
myeloid lineage restricted progenitor cell | 4.19e-46 | 66 |
granulocyte monocyte progenitor cell | 2.19e-45 | 67 |
macrophage dendritic cell progenitor | 1.35e-44 | 61 |
myeloid cell | 1.99e-30 | 108 |
common myeloid progenitor | 1.99e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 4.50e-27 | 120 |
leukocyte | 3.12e-26 | 136 |
nongranular leukocyte | 2.63e-25 | 115 |
hematopoietic oligopotent progenitor cell | 1.02e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-21 | 161 |
hematopoietic cell | 1.21e-21 | 177 |
hematopoietic stem cell | 1.08e-20 | 168 |
mesenchymal cell | 2.93e-09 | 354 |
connective tissue cell | 5.13e-09 | 361 |
motile cell | 3.71e-08 | 386 |
multi fate stem cell | 4.21e-07 | 427 |
macrophage | 4.80e-07 | 6 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.30e-40 | 76 |
bone element | 1.11e-36 | 82 |
skeletal element | 3.28e-33 | 90 |
immune system | 4.64e-32 | 93 |
hematopoietic system | 2.69e-30 | 98 |
blood island | 2.69e-30 | 98 |
skeletal system | 1.22e-29 | 100 |
hemolymphoid system | 2.96e-27 | 108 |
musculoskeletal system | 1.18e-16 | 167 |
lateral plate mesoderm | 7.67e-15 | 203 |
connective tissue | 1.10e-08 | 371 |
mesoderm | 1.88e-08 | 315 |
mesoderm-derived structure | 1.88e-08 | 315 |
presumptive mesoderm | 1.88e-08 | 315 |