FFCP PHASE1:Hg19::chr1:6684918..6684936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:6684918..6684936,+
|short_description=p2@THAP3
|description=CAGE_peak_2_at_THAP3_5end
|association_with_transcript=0bp_to_ENST00000054650,NM_001195753,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90326 | |EntrezGene=90326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20855 | |HGNC=20855 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTV1 | |UniProt=Q8WTV1 | ||
|association_with_transcript=0bp_to_ENST00000054650,NM_001195753,uc001aoc.2_5end | |||
|cluster_id=chr1:6684918..6684936,+ | |||
|description=CAGE_peak_2_at_THAP3_5end | |||
|id=chr1:6684918..6684936,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.58e-11!42;CL:0000860!1.42e-10!45;CL:0000766!2.96e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-21;33!CL:0002057;2.04e-21;33!CL:0000473;4.98e-14;39!CL:0000234;4.98e-14;39!CL:0000576;2.52e-11;48!CL:0000453;4.28e-11;5!CL:0000766;2.21e-09;69!CL:0000136;2.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.96e-23,42;CL:0002057,7.96e-23,42;CL:0000473,5.08e-19,48;CL:0000234,5.08e-19,48;CL:0000557,3.56e-18,67;CL:0000766,2.44e-16,72;CL:0002009,5.91e-16,61;CL:0000839,1.51e-15,66;CL:0000763,7.22e-14,108;CL:0000049,7.22e-14,108;CL:0002194,9.40e-14,59;CL:0000576,9.40e-14,59;CL:0000040,9.40e-14,59;CL:0000559,9.40e-14,59;CL:0000453,4.29e-11,5;CL:0000738,1.27e-09,136;CL:0000988,2.87e-08,177;CL:0002031,2.93e-07,120;CL:0002032,8.41e-07,161;CL:0000837,8.41e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.29e-07!448;UBERON:0004120!5.29e-07!448;UBERON:0006603!5.29e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.49e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-17,76;UBERON:0001474,9.01e-17,82;UBERON:0002390,4.66e-16,98;UBERON:0003061,4.66e-16,98;UBERON:0002193,1.21e-14,108;UBERON:0004765,1.84e-14,90;UBERON:0002405,8.57e-14,93;UBERON:0001434,4.91e-13,100;UBERON:0003081,5.96e-09,203;UBERON:0002331,4.31e-07,10;UBERON:0000358,4.31e-07,10;UBERON:0000307,4.31e-07,10;UBERON:0000091,4.31e-07,10;UBERON:0000087,4.31e-07,10;UBERON:0007010,4.31e-07,10;UBERON:0007806,4.31e-07,10;UBERON:0008780,4.31e-07,10;UBERON:0005728,4.31e-07,10;UBERON:0002204,4.97e-07,167 | |||
|phase1_expression=0.726713517082227,2.99740733447376,0.986680828671798,0,0.446961094427288,0,2.53299878168311,0.631719873426831,4.96252693579693,0.245733936501509,0,0,0.263766978228454,0.74259811776028,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0.204000691244253,0.940364164434263,0.286235987131057,0.958120975510189,0.87879847716362,0.0764134057479513,0.0821005894499457,0.314843125254717,0.393364276848904,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0.309868802321207,0,0,8.30993112797816,7.01905566145496,7.37836960433896,0,0,0,0.436194716338694,2.26725566213286,1.21292030593908,3.25400651667958,2.87817521615278,2.47765096716083,0.28769239232215,0.256160706529101,1.41889337933151,2.06847408441971,3.22742341791913,4.06279459783025,1.50593871634084,1.91034305040492,2.24723484445085,2.14258724659632,1.60464513538047,6.39337125799041,0.989553900560148,1.19678194572979,0.426224750532694,4.64334781805734,1.70215567407342,6.85104473895132,0.75374599577023,0,0.868755378820466,3.02699751316684,6.99727508376373,3.16462387440884,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0.670700859703636,0,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.450445921933289,1.53316637465883,0,0.366403487860815,3.9534125230819,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0.302714855289863,0,0.468642863667593,0.624320153660641,1.1409436430889,0.747243402759005,0.117434498643765,0,0.140450806702248,0.61246251376468,0.61417158655884,0.309977343527296,0,0.247266929278557,1.82032272387605,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0.600182192168805,0.412210116953756,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.365921118388786,0,0.232387885739037,0.829288440122964,0.504641701751257,0.36497735907583,1.56449532329816,0,2.76269842704961,0.928735856063958,0,0.828147600278907,0.842923450390509,0,0.441175890929576,0.435758888184812,0,0.808987848960987,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.614942192715568,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.704387472105808,6.84182781284548,3.31475892859011,3.66103056936502,0.126995788584338,0.763976851116555,0,0,0.719792448923265,2.10240140490742,1.14330573052231,0,0,0,0.258543431515556,7.15312891703765,0.845302752556,0,1.04007436911366,2.05765899409714,0,2.39779961114489,0.428933980974443,2.71310802695722,1.64648067356154,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0.224170287987055,0.788123040807709,0,0.77005821767849,0.508189248444927,0,1.54657762555539,0.670065061337395,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,0.813795071099207,0.207970861530807,0.356857977594324,0.946214490203608,0,0,0,0,0,0.553107505625109,0.521301686808497,0.391602314925481,0.686286847621712,0,0.862856803274467,1.06727557803444,0.909382714338778,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.328508624055237,0.519254429183621,0.581051892299796,0.241718899183244,0,0,0.459257792658427,1.0925470080403,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,2.00675909541941,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0,1.64865618636356,1.09883357782012,0.742585499285292,0,0,0,0.48335359146061,0.770243085573222,0.614014698904518,0.137836572484531,0.537101224341368,1.0151168573996,0.511359764496605,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,2.0911118104818,0,0.532306030317022,1.73986598415015,0,0,0.744316738719335,0,0.571890581771475,0.767693373934002,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,0.842516912477962,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,1.26664581178598,0.987884678879706,1.51789269506286,1.3997388809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|phase1_expression=0.726713517082227,2.99740733447376,0.986680828671798,0,0.446961094427288,0,2.53299878168311,0.631719873426831,4.96252693579693,0.245733936501509,0,0,0.263766978228454,0.74259811776028,0.331397375727916,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0.204000691244253,0.940364164434263,0.286235987131057,0.958120975510189,0.87879847716362,0.0764134057479513,0.0821005894499457,0.314843125254717,0.393364276848904,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0.309868802321207,0,0,8.30993112797816,7.01905566145496,7.37836960433896,0,0,0,0.436194716338694,2.26725566213286,1.21292030593908,3.25400651667958,2.87817521615278,2.47765096716083,0.28769239232215,0.256160706529101,1.41889337933151,2.06847408441971,3.22742341791913,4.06279459783025,1.50593871634084,1.91034305040492,2.24723484445085,2.14258724659632,1.60464513538047,6.39337125799041,0.989553900560148,1.19678194572979,0.426224750532694,4.64334781805734,1.70215567407342,6.85104473895132,0.75374599577023,0,0.868755378820466,3.02699751316684,6.99727508376373,3.16462387440884,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0.670700859703636,0,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0.0945348171640679,0,0.175669571386252,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.450445921933289,1.53316637465883,0,0.366403487860815,3.9534125230819,7.75560528296651,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0.302714855289863,0,0.468642863667593,0.624320153660641,1.1409436430889,0.747243402759005,0.117434498643765,0,0.140450806702248,0.61246251376468,0.61417158655884,0.309977343527296,0,0.247266929278557,1.82032272387605,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0.600182192168805,0.412210116953756,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0.365921118388786,0,0.232387885739037,0.829288440122964,0.504641701751257,0.36497735907583,1.56449532329816,0,2.76269842704961,0.928735856063958,0,0.828147600278907,0.842923450390509,0,0.441175890929576,0.435758888184812,0,0.808987848960987,0.392442930250692,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.614942192715568,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.704387472105808,6.84182781284548,3.31475892859011,3.66103056936502,0.126995788584338,0.763976851116555,0,0,0.719792448923265,2.10240140490742,1.14330573052231,0,0,0,0.258543431515556,7.15312891703765,0.845302752556,0,1.04007436911366,2.05765899409714,0,2.39779961114489,0.428933980974443,2.71310802695722,1.64648067356154,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0.224170287987055,0.788123040807709,0,0.77005821767849,0.508189248444927,0,1.54657762555539,0.670065061337395,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,0.813795071099207,0.207970861530807,0.356857977594324,0.946214490203608,0,0,0,0,0,0.553107505625109,0.521301686808497,0.391602314925481,0.686286847621712,0,0.862856803274467,1.06727557803444,0.909382714338778,1.66435439510497,0.30239029332968,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.328508624055237,0.519254429183621,0.581051892299796,0.241718899183244,0,0,0.459257792658427,1.0925470080403,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0.541892875087706,2.00675909541941,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0,1.64865618636356,1.09883357782012,0.742585499285292,0,0,0,0.48335359146061,0.770243085573222,0.614014698904518,0.137836572484531,0.537101224341368,1.0151168573996,0.511359764496605,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0,2.0911118104818,0,0.532306030317022,1.73986598415015,0,0,0.744316738719335,0,0.571890581771475,0.767693373934002,0.42793898803392,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,0.842516912477962,0.975267478179181,0,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,1.26664581178598,0.987884678879706,1.51789269506286,1.3997388809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| ||
|short_description=p2@THAP3 | |||
}} | }} |
Latest revision as of 00:53, 19 September 2015
Short description: | p2@THAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000054650, NM_001195753, uc001aoc.2_5end |
EntrezGene: | THAP3 |
HGNC: | 20855 |
UniProt: | Q8WTV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.96e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.96e-23 | 42 |
defensive cell | 5.08e-19 | 48 |
phagocyte | 5.08e-19 | 48 |
granulocyte monocyte progenitor cell | 3.56e-18 | 67 |
myeloid leukocyte | 2.44e-16 | 72 |
macrophage dendritic cell progenitor | 5.91e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-15 | 66 |
myeloid cell | 7.22e-14 | 108 |
common myeloid progenitor | 7.22e-14 | 108 |
monopoietic cell | 9.40e-14 | 59 |
monocyte | 9.40e-14 | 59 |
monoblast | 9.40e-14 | 59 |
promonocyte | 9.40e-14 | 59 |
Langerhans cell | 4.29e-11 | 5 |
leukocyte | 1.27e-09 | 136 |
hematopoietic cell | 2.87e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 2.93e-07 | 120 |
hematopoietic oligopotent progenitor cell | 8.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.41e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-17 | 76 |
bone element | 9.01e-17 | 82 |
hematopoietic system | 4.66e-16 | 98 |
blood island | 4.66e-16 | 98 |
hemolymphoid system | 1.21e-14 | 108 |
skeletal element | 1.84e-14 | 90 |
immune system | 8.57e-14 | 93 |
skeletal system | 4.91e-13 | 100 |
lateral plate mesoderm | 5.96e-09 | 203 |
umbilical cord | 4.31e-07 | 10 |
blastocyst | 4.31e-07 | 10 |
blastula | 4.31e-07 | 10 |
bilaminar disc | 4.31e-07 | 10 |
inner cell mass | 4.31e-07 | 10 |
cleaving embryo | 4.31e-07 | 10 |
connecting stalk | 4.31e-07 | 10 |
inner cell mass derived epiblast | 4.31e-07 | 10 |
extraembryonic mesoderm | 4.31e-07 | 10 |
musculoskeletal system | 4.97e-07 | 167 |