FFCP PHASE1:Hg19::chr22:18260372..18260387,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:18260372..18260387,+
|short_description=p3@LINC00528
|description=CAGE_peak_3_at_LINC00528_5end
|association_with_transcript=284bp_to_AK097861_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=200298 | |EntrezGene=200298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26875 | |HGNC=26875 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1L1 | |UniProt=Q8N1L1 | ||
|association_with_transcript=284bp_to_AK097861_5end | |||
|cluster_id=chr22:18260372..18260387,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_LINC00528_5end | |||
|id=chr22:18260372..18260387,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.22e-87!140;CL:0002057!4.69e-76!42;CL:0000860!5.01e-70!45;CL:0002031!6.04e-68!124;CL:0002087!1.94e-67!119;CL:0000037!9.24e-67!172;CL:0000566!9.24e-67!172;CL:0000766!1.05e-66!76;CL:0002032!1.84e-64!165;CL:0000837!1.84e-64!165;CL:0000988!8.46e-62!182;CL:0000557!1.88e-54!71;CL:0002009!5.71e-53!65;CL:0000839!2.21e-50!70;CL:0002194!8.19e-50!63;CL:0000576!8.19e-50!63;CL:0000040!8.19e-50!63;CL:0000559!8.19e-50!63;CL:0000763!6.10e-47!112;CL:0000049!6.10e-47!112;CL:0000134!5.78e-23!358;CL:0002320!4.56e-22!365;CL:0000219!6.46e-19!390;CL:0002393!1.33e-17!9;CL:0002397!1.33e-17!9;CL:0000048!4.15e-17!430;CL:0000094!6.03e-17!8;CL:0000723!1.53e-16!436;CL:0000034!1.73e-16!444;CL:0000838!3.57e-15!52;CL:0000542!9.36e-15!53;CL:0000051!9.36e-15!53;CL:0000081!8.52e-12!11;CL:0000775!1.32e-07!3;CL:0000791!1.69e-07!18;CL:0000789!1.69e-07!18;CL:0002420!1.69e-07!18;CL:0002419!1.69e-07!18;CL:0000790!1.69e-07!18;CL:0000084!3.68e-07!25;CL:0000827!3.68e-07!25;CL:0000767!5.14e-07!3;CL:0000625!7.27e-07!11;CL:0000842!8.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.79e-73;33!CL:0002057;6.79e-73;33!CL:0000576;2.87e-55;48!CL:0000473;2.29e-50;39!CL:0000234;2.29e-50;39!CL:0000766;1.30e-45;69!CL:0000094;2.70e-26;8!CL:0002087;1.22e-20;104!CL:0002393;1.08e-19;6!CL:0002397;1.08e-19;6!CL:0000081;1.07e-18;11!CL:0000763;3.36e-18;100!CL:0000738;2.84e-16;136!CL:0000775;2.81e-11;3!CL:0000988;7.62e-11;177!CL:0000767;2.50e-10;3!CL:0000226;5.73e-10;3!CL:0000842;5.73e-10;3!CL:0000623;9.67e-10;3!CL:0000875;2.61e-09;3!CL:0002396;2.61e-09;3!CL:0000219;8.55e-09;193!CL:0000771;3.79e-08;2!CL:0001014;7.21e-07;2!CL:0001016;7.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-105,42;CL:0002057,1.14e-105,42;CL:0000766,3.02e-98,72;CL:0000473,3.71e-91,48;CL:0000234,3.71e-91,48;CL:0000738,1.54e-81,136;CL:0002009,1.13e-79,61;CL:0000557,5.62e-79,67;CL:0002194,1.36e-74,59;CL:0000576,1.36e-74,59;CL:0000040,1.36e-74,59;CL:0000559,1.36e-74,59;CL:0000839,9.89e-73,66;CL:0000763,2.36e-67,108;CL:0000049,2.36e-67,108;CL:0000037,1.40e-63,168;CL:0002087,8.17e-61,115;CL:0002031,4.92e-60,120;CL:0000988,1.08e-59,177;CL:0002032,1.14e-59,161;CL:0000837,1.14e-59,161;CL:0002393,2.34e-27,9;CL:0002397,2.34e-27,9;CL:0000094,2.66e-26,8;CL:0000134,3.37e-23,354;CL:0002320,1.74e-22,361;CL:0000219,5.62e-20,386;CL:0000081,1.06e-18,11;CL:0000048,6.63e-17,427;CL:0000723,1.76e-16,433;CL:0000034,6.22e-16,441;CL:0000775,2.82e-11,3;CL:0000767,2.47e-10,3;CL:0000226,5.07e-10,3;CL:0000842,5.07e-10,3;CL:0000623,1.06e-09,3;CL:0000825,1.06e-09,3;CL:0000875,2.19e-09,3;CL:0002396,2.19e-09,3;CL:0000771,3.79e-08,2;CL:0001014,6.01e-07,2;CL:0001016,6.01e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-74;42!CL:0000049;2.33e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.20e-55!102;UBERON:0003061!2.20e-55!102;UBERON:0002193!1.93e-52!112;UBERON:0002371!1.24e-46!80;UBERON:0001474!2.51e-42!86;UBERON:0002405!3.74e-36!115;UBERON:0004765!8.20e-34!101;UBERON:0001434!8.20e-34!101;UBERON:0002384!1.34e-21!375;UBERON:0003081!2.67e-19!216;UBERON:0002204!2.05e-16!167;UBERON:0000178!2.86e-10!15;UBERON:0000179!2.86e-10!15;UBERON:0000463!2.86e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.00e-68,76;UBERON:0002390,1.99e-64,98;UBERON:0003061,1.99e-64,98;UBERON:0001474,1.16e-62,82;UBERON:0002193,2.06e-57,108;UBERON:0004765,3.66e-56,90;UBERON:0002405,5.20e-54,93;UBERON:0001434,1.74e-49,100;UBERON:0002204,2.67e-25,167;UBERON:0003081,4.30e-25,203;UBERON:0002384,1.63e-21,371;UBERON:0000926,4.79e-12,315;UBERON:0004120,4.79e-12,315;UBERON:0006603,4.79e-12,315 | |||
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| ||
|short_description=p3@LINC00528 | |||
}} | }} |
Latest revision as of 01:36, 19 September 2015
Short description: | p3@LINC00528 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LINC00528_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 284bp_to_AK097861_5end |
EntrezGene: | LINC00528 |
HGNC: | 26875 |
UniProt: | Q8N1L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.00e-68 | 76 |
hematopoietic system | 1.99e-64 | 98 |
blood island | 1.99e-64 | 98 |
bone element | 1.16e-62 | 82 |
hemolymphoid system | 2.06e-57 | 108 |
skeletal element | 3.66e-56 | 90 |
immune system | 5.20e-54 | 93 |
skeletal system | 1.74e-49 | 100 |
musculoskeletal system | 2.67e-25 | 167 |
lateral plate mesoderm | 4.30e-25 | 203 |
connective tissue | 1.63e-21 | 371 |
mesoderm | 4.79e-12 | 315 |
mesoderm-derived structure | 4.79e-12 | 315 |
presumptive mesoderm | 4.79e-12 | 315 |