FFCP PHASE1:Hg19::chr6:46889579..46889591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221395 | |EntrezGene=221395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19030 | |HGNC=19030 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZF2,E9PBS6 | |UniProt=Q8IZF2,E9PBS6 | ||
|association_with_transcript=122bp_to_ENST00000283296,ENST00000362015,ENST00000456426,NM_001098518,uc003oyo.3,uc003oyp.3,uc003oyr.2_5end | |association_with_transcript=122bp_to_ENST00000283296,ENST00000362015,ENST00000456426,NM_001098518,uc003oyo.3,uc003oyp.3,uc003oyr.2_5end | ||
|cluster_id=chr6:46889579..46889591,- | |||
|coexpression_cluster_id=C1443 | |coexpression_cluster_id=C1443 | ||
|description=CAGE_peak_6_at_GPR116_5end | |description=CAGE_peak_6_at_GPR116_5end | ||
|id=chr6:46889579..46889591,- | |id=chr6:46889579..46889591,- | ||
|ontology_enrichment_celltype=CL:0005020!1.48e-10!6;CL:0002138!1.48e-10!6;CL:0005022!1.48e-10!6;CL:0002139!9.69e-10!24;CL:0000115!7.61e-09!35 | |ontology_enrichment_celltype=CL:0005020!1.48e-10!6;CL:0002138!1.48e-10!6;CL:0005022!1.48e-10!6;CL:0002139!9.69e-10!24;CL:0000115!7.61e-09!35 | ||
|ontology_enrichment_celltype_v019=CL:0002138;3.19e-26;6!CL:0002139;2.95e-13;24!CL:0000115;1.60e-12;36!CL:0002078;2.46e-08;45!CL:0002188;3.00e-08;5!CL:0002144;8.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.76e-26,6;CL:0002138,2.76e-26,6;CL:0005022,2.76e-26,6;CL:0000115,4.97e-15,36;CL:0002139,2.16e-13,24;CL:0002078,1.63e-11,45;CL:0000213,2.21e-08,58;CL:0000215,2.21e-08,58;CL:0002188,2.68e-08,5;CL:0002144,7.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;3.19e-26;6!UBERON:0005062;1.04e-10;4!UBERON:0007284;1.04e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.12e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.12e-54!115;UBERON:0001049!4.40e-26!57;UBERON:0005068!4.40e-26!57;UBERON:0006241!4.40e-26!57;UBERON:0007135!4.40e-26!57;UBERON:0002780!7.66e-23!41;UBERON:0001890!7.66e-23!41;UBERON:0006240!7.66e-23!41;UBERON:0003080!4.37e-22!42;UBERON:0002616!8.29e-22!59;UBERON:0003075!2.45e-21!86;UBERON:0007284!2.45e-21!86;UBERON:0001017!4.03e-20!82;UBERON:0001893!5.77e-20!34;UBERON:0002346!8.71e-20!90;UBERON:0002020!1.05e-19!34;UBERON:0003528!1.05e-19!34;UBERON:0005743!1.32e-19!86;UBERON:0000955!3.37e-19!69;UBERON:0006238!3.37e-19!69;UBERON:0002791!8.37e-19!33;UBERON:0001869!2.22e-18!32;UBERON:0004111!1.03e-16!241;UBERON:0000073!1.48e-16!94;UBERON:0001016!1.48e-16!94;UBERON:0000025!3.77e-16!194;UBERON:0002619!1.67e-15!22;UBERON:0001950!1.79e-15!20;UBERON:0000477!4.92e-15!286;UBERON:0003056!1.67e-14!61;UBERON:0000956!4.14e-13!25;UBERON:0000203!4.14e-13!25;UBERON:0000200!2.52e-09!6;UBERON:0000033!2.80e-09!123;UBERON:0000153!5.12e-09!129;UBERON:0007811!5.12e-09!129;UBERON:0000483!6.56e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002308!2.47e-08!9;UBERON:0000125!2.47e-08!9;UBERON:0001872!4.86e-08!5;UBERON:0002465!7.19e-08!10;UBERON:0004121!8.89e-08!169;UBERON:0001473!1.32e-07!8;UBERON:0004536!1.32e-07!8;UBERON:0006558!1.32e-07!8;UBERON:0000924!2.50e-07!173;UBERON:0006601!2.50e-07!173;UBERON:0002420!9.52e-07!9;UBERON:0007245!9.52e-07!9;UBERON:0010009!9.52e-07!9;UBERON:0010011!9.52e-07!9;UBERON:0000454!9.52e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!4.12e-54!115;UBERON:0001049!4.40e-26!57;UBERON:0005068!4.40e-26!57;UBERON:0006241!4.40e-26!57;UBERON:0007135!4.40e-26!57;UBERON:0002780!7.66e-23!41;UBERON:0001890!7.66e-23!41;UBERON:0006240!7.66e-23!41;UBERON:0003080!4.37e-22!42;UBERON:0002616!8.29e-22!59;UBERON:0003075!2.45e-21!86;UBERON:0007284!2.45e-21!86;UBERON:0001017!4.03e-20!82;UBERON:0001893!5.77e-20!34;UBERON:0002346!8.71e-20!90;UBERON:0002020!1.05e-19!34;UBERON:0003528!1.05e-19!34;UBERON:0005743!1.32e-19!86;UBERON:0000955!3.37e-19!69;UBERON:0006238!3.37e-19!69;UBERON:0002791!8.37e-19!33;UBERON:0001869!2.22e-18!32;UBERON:0004111!1.03e-16!241;UBERON:0000073!1.48e-16!94;UBERON:0001016!1.48e-16!94;UBERON:0000025!3.77e-16!194;UBERON:0002619!1.67e-15!22;UBERON:0001950!1.79e-15!20;UBERON:0000477!4.92e-15!286;UBERON:0003056!1.67e-14!61;UBERON:0000956!4.14e-13!25;UBERON:0000203!4.14e-13!25;UBERON:0000200!2.52e-09!6;UBERON:0000033!2.80e-09!123;UBERON:0000153!5.12e-09!129;UBERON:0007811!5.12e-09!129;UBERON:0000483!6.56e-09!309;UBERON:0000119!1.22e-08!312;UBERON:0002308!2.47e-08!9;UBERON:0000125!2.47e-08!9;UBERON:0001872!4.86e-08!5;UBERON:0002465!7.19e-08!10;UBERON:0004121!8.89e-08!169;UBERON:0001473!1.32e-07!8;UBERON:0004536!1.32e-07!8;UBERON:0006558!1.32e-07!8;UBERON:0000924!2.50e-07!173;UBERON:0006601!2.50e-07!173;UBERON:0002420!9.52e-07!9;UBERON:0007245!9.52e-07!9;UBERON:0010009!9.52e-07!9;UBERON:0010011!9.52e-07!9;UBERON:0000454!9.52e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002465;1.02e-20;10!UBERON:0001473;1.61e-19;8!UBERON:0004536;1.61e-19;8!UBERON:0006558;1.61e-19;8!UBERON:0003978;4.01e-14;3!UBERON:0000946;4.01e-14;3!UBERON:0002405;1.92e-11;27!UBERON:0002133;2.41e-10;2!UBERON:0007100;4.30e-10;25!UBERON:0001950;5.10e-09;20!UBERON:0001872;3.00e-08;5!UBERON:0002619;3.74e-08;22!UBERON:0002118;4.82e-08;5!UBERON:0004151;2.98e-07;3!UBERON:0000956;4.17e-07;25!UBERON:0000203;4.17e-07;25!UBERON:0010523;8.37e-07;3!UBERON:0001915;8.37e-07;3!UBERON:0001982;8.37e-07;3!UBERON:0000948;9.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,8.11e-21,10;UBERON:0001473,1.45e-19,8;UBERON:0004536,1.45e-19,8;UBERON:0006558,1.45e-19,8;UBERON:0003978,5.86e-14,3;UBERON:0009751,5.86e-14,3;UBERON:0000946,5.86e-14,3;UBERON:0002523,5.86e-14,3;UBERON:0005983,5.86e-14,3;UBERON:0002165,5.86e-14,3;UBERON:0002062,5.86e-14,3;UBERON:0007280,5.86e-14,3;UBERON:0003887,6.16e-12,12;UBERON:0002133,2.42e-10,2;UBERON:0007023,2.70e-10,114;UBERON:0004111,3.47e-10,240;UBERON:0004876,1.42e-09,11;UBERON:0007100,3.02e-09,27;UBERON:0001950,4.70e-09,20;UBERON:0005103,1.28e-08,8;UBERON:0000083,1.28e-08,8;UBERON:0009201,1.28e-08,8;UBERON:0006553,1.28e-08,8;UBERON:0003074,1.28e-08,8;UBERON:0003060,1.28e-08,8;UBERON:0002619,3.48e-08,22;UBERON:0001872,3.54e-08,5;UBERON:0002118,3.91e-08,5;UBERON:0000025,4.10e-08,192;UBERON:0000080,1.14e-07,9;UBERON:0002120,1.14e-07,9;UBERON:0004875,1.14e-07,9;UBERON:0005721,1.14e-07,9;UBERON:0005754,1.14e-07,9;UBERON:0007297,1.14e-07,9;UBERON:0001009,1.78e-07,112;UBERON:0004151,3.03e-07,3;UBERON:0000956,3.91e-07,25;UBERON:0000203,3.91e-07,25;UBERON:0001869,5.60e-07,32;UBERON:0000055,7.30e-07,68;UBERON:0010523,7.36e-07,3;UBERON:0001915,7.36e-07,3;UBERON:0001982,7.36e-07,3 | |||
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|short_description=p6@GPR116 | |short_description=p6@GPR116 | ||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p6@GPR116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPR116_5end |
Coexpression cluster: | C1443_Endothelial_lung_left_heart_adipose_spleen_mature |
Association with transcript: | 122bp_to_ENST00000283296, ENST00000362015, ENST00000456426, NM_001098518, uc003oyo.3, uc003oyp.3, uc003oyr.2_5end |
EntrezGene: | GPR116 |
HGNC: | 19030 |
UniProt: | Q8IZF2E9PBS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.76e-26 | 6 |
endothelial cell of lymphatic vessel | 2.76e-26 | 6 |
vascular lymphangioblast | 2.76e-26 | 6 |
endothelial cell | 4.97e-15 | 36 |
endothelial cell of vascular tree | 2.16e-13 | 24 |
meso-epithelial cell | 1.63e-11 | 45 |
lining cell | 2.21e-08 | 58 |
barrier cell | 2.21e-08 | 58 |
glomerular endothelial cell | 2.68e-08 | 5 |
capillary endothelial cell | 7.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.12e-07 | 14 |