FFCP PHASE1:Hg19::chr4:86699968..86699983,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=109bp_to_ENST00000395183_5end | |association_with_transcript=109bp_to_ENST00000395183_5end | ||
|cluster_id=chr4:86699968..86699983,+ | |||
|coexpression_cluster_id=C4257 | |||
|description=CAGE_peak_11_at_ARHGAP24_5end | |description=CAGE_peak_11_at_ARHGAP24_5end | ||
|id=chr4:86699968..86699983,+ | |id=chr4:86699968..86699983,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.57e-31!24;CL:0000115!9.16e-28!35;CL:0000071!8.38e-24!18;CL:0002546!8.38e-24!18;CL:0000222!2.55e-21!119;CL:0002078!3.33e-21!44;CL:0000213!3.36e-18!57;CL:0000215!3.36e-18!57;CL:0000057!2.43e-13!75;CL:1000413!5.49e-13!9;CL:0002620!5.39e-12!23;CL:0000055!2.70e-11!180;CL:0002544!3.69e-09!6;CL:0002543!3.79e-09!6;CL:0005020!8.51e-09!6;CL:0002138!8.51e-09!6;CL:0005022!8.51e-09!6;CL:0000220!6.18e-07!246;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57;CL:0002321!9.65e-07!248 | |ontology_enrichment_celltype=CL:0002139!4.57e-31!24;CL:0000115!9.16e-28!35;CL:0000071!8.38e-24!18;CL:0002546!8.38e-24!18;CL:0000222!2.55e-21!119;CL:0002078!3.33e-21!44;CL:0000213!3.36e-18!57;CL:0000215!3.36e-18!57;CL:0000057!2.43e-13!75;CL:1000413!5.49e-13!9;CL:0002620!5.39e-12!23;CL:0000055!2.70e-11!180;CL:0002544!3.69e-09!6;CL:0002543!3.79e-09!6;CL:0005020!8.51e-09!6;CL:0002138!8.51e-09!6;CL:0005022!8.51e-09!6;CL:0000220!6.18e-07!246;CL:0000680!7.53e-07!57;CL:0000056!7.53e-07!57;CL:0000355!7.53e-07!57;CL:0002321!9.65e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.09e-70;24!CL:0000071;2.48e-56;18!CL:0000115;1.52e-52;36!CL:1000413;1.03e-32;9!CL:0002078;2.76e-31;45!CL:0000213;7.11e-24;58!CL:0000215;7.11e-24;58!CL:0002544;3.03e-22;6!CL:0002543;3.43e-22;6!CL:0002138;1.88e-15;6!CL:0002618;5.54e-12;3!CL:0002188;5.20e-11;5!CL:0000076;5.32e-09;63!CL:0002545;1.19e-08;2!CL:1000746;7.02e-08;7!CL:1000612;7.02e-08;7!CL:0002589;8.18e-08;2!CL:0002570;7.29e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.84e-70,24;CL:0000115,9.65e-63,36;CL:0000071,2.38e-56,18;CL:0002546,2.38e-56,18;CL:0002078,9.18e-49,45;CL:0000213,3.05e-36,58;CL:0000215,3.05e-36,58;CL:1000413,1.09e-32,9;CL:0000222,2.04e-27,121;CL:0002544,3.11e-22,6;CL:0002543,3.35e-22,6;CL:0005020,1.81e-15,6;CL:0002138,1.81e-15,6;CL:0005022,1.81e-15,6;CL:0000076,6.62e-13,63;CL:0002618,5.28e-12,3;CL:0002188,4.95e-11,5;CL:0002321,2.79e-10,250;CL:0002545,1.15e-08,2;CL:0002589,5.59e-08,2;CL:1000746,6.79e-08,7;CL:1000612,6.79e-08,7;CL:0002570,7.31e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002546;2.48e-56;18!CL:0005022;1.88e-15;6!CL:0000222;6.66e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.53e-30!69;UBERON:0002049!2.13e-26!79;UBERON:0007798!2.13e-26!79;UBERON:0001981!7.08e-26!60;UBERON:0007500!7.08e-26!60;UBERON:0004537!7.08e-26!60;UBERON:0006965!7.08e-26!60;UBERON:0004872!9.63e-26!84;UBERON:0001986!8.38e-24!18;UBERON:0004638!8.38e-24!18;UBERON:0004852!8.38e-24!18;UBERON:0004535!2.18e-21!110;UBERON:0001009!3.49e-21!113;UBERON:0003914!3.71e-21!118;UBERON:0000487!5.24e-20!22;UBERON:0001637!1.55e-18!42;UBERON:0003509!1.55e-18!42;UBERON:0004572!1.55e-18!42;UBERON:0006914!1.67e-18!25;UBERON:0004573!8.54e-15!33;UBERON:0004571!8.54e-15!33;UBERON:0003915!5.49e-13!9;UBERON:0004700!5.49e-13!9;UBERON:0001917!5.49e-13!9;UBERON:0000947!6.90e-12!21;UBERON:0010191!6.90e-12!21;UBERON:0000490!2.01e-11!138;UBERON:0002199!1.74e-10!45;UBERON:0002416!1.74e-10!45;UBERON:0004290!1.47e-09!70;UBERON:0002097!3.40e-09!40;UBERON:0000119!4.29e-08!312;UBERON:0000914!9.31e-08!83;UBERON:0002329!9.31e-08!83;UBERON:0003077!9.31e-08!83;UBERON:0003059!9.31e-08!83;UBERON:0007282!9.31e-08!83;UBERON:0009618!9.31e-08!83;UBERON:0007285!9.31e-08!83;UBERON:0000483!1.11e-07!309;UBERON:0004111!1.14e-07!241;UBERON:0000025!1.43e-07!194;UBERON:0000486!1.92e-07!82;UBERON:0001638!5.26e-07!9;UBERON:0003920!5.26e-07!9;UBERON:0004582!5.26e-07!9;UBERON:0000926!6.40e-07!448;UBERON:0004120!6.40e-07!448;UBERON:0006603!6.40e-07!448;UBERON:0000477!6.88e-07!286;UBERON:0002385!8.79e-07!63;UBERON:0001015!8.79e-07!63;UBERON:0000383!8.79e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.48e-56;18!UBERON:0001986;2.48e-56;18!UBERON:0004852;2.48e-56;18!UBERON:0000487;2.99e-45;22!UBERON:0006914;2.87e-39;25!UBERON:0003915;1.03e-32;9!UBERON:0004700;1.03e-32;9!UBERON:0001917;1.03e-32;9!UBERON:0000490;2.28e-26;33!UBERON:0000055;5.35e-25;65!UBERON:0001637;3.10e-23;42!UBERON:0003509;3.10e-23;42!UBERON:0004572;3.10e-23;42!UBERON:0007500;3.68e-21;56!UBERON:0001981;3.68e-21;56!UBERON:0004537;3.68e-21;56!UBERON:0004573;2.56e-19;33!UBERON:0004571;2.56e-19;33!UBERON:0002049;1.63e-18;75!UBERON:0007798;1.63e-18;75!UBERON:0003914;7.71e-15;74!UBERON:0001638;1.52e-14;9!UBERON:0003920;1.52e-14;9!UBERON:0004582;1.52e-14;9!UBERON:0000947;2.98e-12;21!UBERON:0010191;2.98e-12;21!UBERON:0001473;1.70e-11;8!UBERON:0004536;1.70e-11;8!UBERON:0006558;1.70e-11;8!UBERON:0000025;2.70e-11;93!UBERON:0004535;5.86e-11;109!UBERON:0001009;4.36e-10;112!UBERON:0002465;4.07e-09;10!UBERON:0005800;1.19e-08;2!UBERON:0001515;1.19e-08;2!UBERON:0000074;7.02e-08;7!UBERON:0001229;7.02e-08;7!UBERON:0001529;8.18e-08;2!UBERON:0007204;8.18e-08;2!UBERON:0004111;1.79e-07;130!UBERON:0002066;2.48e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.38e-56,18;UBERON:0001986,2.38e-56,18;UBERON:0004852,2.38e-56,18;UBERON:0000055,3.37e-49,68;UBERON:0000487,2.89e-45,22;UBERON:0002049,8.80e-42,78;UBERON:0007798,8.80e-42,78;UBERON:0007500,3.76e-40,59;UBERON:0001981,3.76e-40,59;UBERON:0004537,3.76e-40,59;UBERON:0006965,3.76e-40,59;UBERON:0006914,2.78e-39,25;UBERON:0003915,1.09e-32,9;UBERON:0004700,1.09e-32,9;UBERON:0001917,1.09e-32,9;UBERON:0004535,1.93e-31,109;UBERON:0004872,8.08e-31,83;UBERON:0001009,2.34e-30,112;UBERON:0001637,3.07e-28,42;UBERON:0003509,3.07e-28,42;UBERON:0004572,3.07e-28,42;UBERON:0003914,2.62e-26,117;UBERON:0004573,4.51e-20,33;UBERON:0004571,4.51e-20,33;UBERON:0001638,1.49e-14,9;UBERON:0003920,1.49e-14,9;UBERON:0004582,1.49e-14,9;UBERON:0003081,2.36e-14,203;UBERON:0004111,6.23e-13,240;UBERON:0000490,8.13e-13,148;UBERON:0000025,1.26e-12,192;UBERON:0000947,3.91e-12,21;UBERON:0010191,3.91e-12,21;UBERON:0001473,1.65e-11,8;UBERON:0004536,1.65e-11,8;UBERON:0006558,1.65e-11,8;UBERON:0002465,3.98e-09,10;UBERON:0005800,1.15e-08,2;UBERON:0001515,1.15e-08,2;UBERON:0000926,3.95e-08,315;UBERON:0004120,3.95e-08,315;UBERON:0006603,3.95e-08,315;UBERON:0001529,5.59e-08,2;UBERON:0007204,5.59e-08,2;UBERON:0010532,6.79e-08,7;UBERON:0000074,6.79e-08,7;UBERON:0001229,6.79e-08,7;UBERON:0001230,6.79e-08,7;UBERON:0003220,6.79e-08,7;UBERON:0005749,6.79e-08,7;UBERON:0004199,6.79e-08,7;UBERON:0004209,6.79e-08,7;UBERON:0004198,6.79e-08,7;UBERON:0002066,2.41e-07,5;UBERON:0005103,6.53e-07,8;UBERON:0000083,6.53e-07,8;UBERON:0009201,6.53e-07,8;UBERON:0006553,6.53e-07,8;UBERON:0003074,6.53e-07,8;UBERON:0003060,6.53e-07,8 | |||
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| ||
|short_description=p11@ARHGAP24 | |short_description=p11@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:37, 19 September 2015
Short description: | p11@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARHGAP24_5end |
Coexpression cluster: | C4257_Endothelial_basal_Smooth_bone_Renal_mesenchymal_Fibroblast |
Association with transcript: | 109bp_to_ENST00000395183_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.84e-70 | 24 |
endothelial cell | 9.65e-63 | 36 |
blood vessel endothelial cell | 2.38e-56 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.38e-56 | 18 |
meso-epithelial cell | 9.18e-49 | 45 |
lining cell | 3.05e-36 | 58 |
barrier cell | 3.05e-36 | 58 |
endothelial cell of artery | 1.09e-32 | 9 |
mesodermal cell | 2.04e-27 | 121 |
aortic endothelial cell | 3.11e-22 | 6 |
vein endothelial cell | 3.35e-22 | 6 |
lymphangioblast | 1.81e-15 | 6 |
endothelial cell of lymphatic vessel | 1.81e-15 | 6 |
vascular lymphangioblast | 1.81e-15 | 6 |
squamous epithelial cell | 6.62e-13 | 63 |
endothelial cell of umbilical vein | 5.28e-12 | 3 |
glomerular endothelial cell | 4.95e-11 | 5 |
embryonic cell | 2.79e-10 | 250 |
thoracic aorta endothelial cell | 1.15e-08 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 5.59e-08 | 2 |
glomerular cell | 6.79e-08 | 7 |
kidney corpuscule cell | 6.79e-08 | 7 |
mesenchymal stem cell of adipose | 7.31e-07 | 8 |