FFCP PHASE1:Hg19::chr19:49497121..49497164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10856 | |EntrezGene=10856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10475 | |HGNC=10475 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y230 | |UniProt=Q9Y230 | ||
|association_with_transcript=0bp_to_ENST00000221413,NM_006666,uc002plr.1,uc002pls.1,uc010emn.1,uc010yab.1_5end | |association_with_transcript=0bp_to_ENST00000221413,NM_006666,uc002plr.1,uc002pls.1,uc010emn.1,uc010yab.1_5end | ||
|cluster_id=chr19:49497121..49497164,+ | |||
|coexpression_cluster_id=C1171 | |coexpression_cluster_id=C1171 | ||
|description=CAGE_peak_1_at_RUVBL2_5end | |description=CAGE_peak_1_at_RUVBL2_5end | ||
|id=chr19:49497121..49497164,+ | |id=chr19:49497121..49497164,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.47e-27!679;CL:0000004!2.47e-27!679;CL:0000255!2.47e-27!679;CL:0000012!3.30e-27!682;CL:0002321!7.34e-21!248;CL:0000220!1.33e-20!246;CL:0000066!5.52e-20!254;CL:0000055!1.27e-19!180;CL:0000222!2.40e-17!119;CL:0000144!2.08e-16!625;CL:0000003!4.19e-14!722;CL:0000183!2.75e-12!59;CL:0002371!5.39e-12!591;CL:0000393!8.34e-11!60;CL:0000211!8.34e-11!60;CL:0000187!2.29e-10!54;CL:0000680!6.71e-10!57;CL:0000056!6.71e-10!57;CL:0000355!6.71e-10!57;CL:0000192!2.08e-09!42;CL:0000514!2.08e-09!42;CL:0000063!3.25e-09!578;CL:0000076!1.31e-08!62;CL:0000213!6.49e-08!57;CL:0000215!6.49e-08!57;CL:0000359!8.26e-08!32;CL:1000449!1.61e-07!16;CL:0000057!1.78e-07!75;CL:1000497!4.98e-07!18;CL:0002518!4.98e-07!18 | |ontology_enrichment_celltype=CL:0000548!2.47e-27!679;CL:0000004!2.47e-27!679;CL:0000255!2.47e-27!679;CL:0000012!3.30e-27!682;CL:0002321!7.34e-21!248;CL:0000220!1.33e-20!246;CL:0000066!5.52e-20!254;CL:0000055!1.27e-19!180;CL:0000222!2.40e-17!119;CL:0000144!2.08e-16!625;CL:0000003!4.19e-14!722;CL:0000183!2.75e-12!59;CL:0002371!5.39e-12!591;CL:0000393!8.34e-11!60;CL:0000211!8.34e-11!60;CL:0000187!2.29e-10!54;CL:0000680!6.71e-10!57;CL:0000056!6.71e-10!57;CL:0000355!6.71e-10!57;CL:0000192!2.08e-09!42;CL:0000514!2.08e-09!42;CL:0000063!3.25e-09!578;CL:0000076!1.31e-08!62;CL:0000213!6.49e-08!57;CL:0000215!6.49e-08!57;CL:0000359!8.26e-08!32;CL:1000449!1.61e-07!16;CL:0000057!1.78e-07!75;CL:1000497!4.98e-07!18;CL:0002518!4.98e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.75e-08;15!CL:0000359;2.27e-07;32!CL:1000497;2.84e-07;17!CL:0002518;2.84e-07;17!CL:0000192;3.19e-07;43!CL:0002681;6.51e-07;12!CL:0002584;6.51e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.17e-21,250;CL:0000066,5.53e-20,253;CL:0000222,1.14e-17,121;CL:0000393,1.01e-10,61;CL:0000211,1.01e-10,61;CL:0000187,2.82e-10,55;CL:0000680,8.02e-10,58;CL:0000056,8.02e-10,58;CL:0000355,8.02e-10,58;CL:0000192,2.68e-09,43;CL:0000514,2.68e-09,43;CL:0000076,1.11e-08,63;CL:0000213,2.99e-08,58;CL:0000215,2.99e-08,58;CL:1000449,8.18e-08,15;CL:0000359,8.26e-08,32;CL:1000497,2.94e-07,17;CL:0002518,2.94e-07,17;CL:0000057,4.14e-07,76;CL:0002681,6.78e-07,12;CL:0002584,6.78e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.19e-07;43 | |||
|ontology_enrichment_disease=DOID:162!1.98e-14!235;DOID:14566!1.18e-13!239;DOID:2531!3.71e-12!51;DOID:0060083!3.71e-12!51;DOID:1240!1.26e-11!39;DOID:8692!3.57e-11!31;DOID:0050686!2.32e-09!137 | |ontology_enrichment_disease=DOID:162!1.98e-14!235;DOID:14566!1.18e-13!239;DOID:2531!3.71e-12!51;DOID:0060083!3.71e-12!51;DOID:1240!1.26e-11!39;DOID:8692!3.57e-11!31;DOID:0050686!2.32e-09!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;7.13e-11;31!DOID:1240;2.79e-09;39!DOID:2531;1.12e-07;51!DOID:0060083;1.12e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.98e-14,235;DOID:14566,1.18e-13,239;DOID:2531,3.71e-12,51;DOID:0060083,3.71e-12,51;DOID:1240,1.26e-11,39;DOID:8692,3.57e-11,31;DOID:0050686,2.32e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.05e-13!238;UBERON:0009142!2.05e-13!238;UBERON:0003914!7.06e-13!118;UBERON:0005256!4.13e-12!143;UBERON:0004290!2.48e-11!70;UBERON:0002049!3.87e-11!79;UBERON:0007798!3.87e-11!79;UBERON:0000490!4.20e-11!138;UBERON:0000914!4.38e-11!83;UBERON:0002329!4.38e-11!83;UBERON:0003077!4.38e-11!83;UBERON:0003059!4.38e-11!83;UBERON:0007282!4.38e-11!83;UBERON:0009618!4.38e-11!83;UBERON:0007285!4.38e-11!83;UBERON:0001637!7.93e-11!42;UBERON:0003509!7.93e-11!42;UBERON:0004572!7.93e-11!42;UBERON:0000486!1.33e-10!82;UBERON:0001981!1.48e-10!60;UBERON:0007500!1.48e-10!60;UBERON:0004537!1.48e-10!60;UBERON:0006965!1.48e-10!60;UBERON:0002100!2.86e-10!216;UBERON:0000055!2.89e-10!69;UBERON:0004872!1.16e-09!84;UBERON:0000119!5.06e-09!312;UBERON:0001134!1.28e-08!61;UBERON:0002036!1.28e-08!61;UBERON:0003082!1.28e-08!61;UBERON:0000483!1.95e-08!309;UBERON:0004573!8.06e-08!33;UBERON:0004571!8.06e-08!33;UBERON:0002385!1.42e-07!63;UBERON:0001015!1.42e-07!63;UBERON:0000383!1.42e-07!63;UBERON:0004211!1.61e-07!16;UBERON:0001285!1.61e-07!16;UBERON:0007684!1.61e-07!16;UBERON:0003220!1.61e-07!16;UBERON:0004208!1.61e-07!16;UBERON:0000481!6.02e-07!347;UBERON:0001048!8.71e-07!168;UBERON:0006555!9.30e-07!17;UBERON:0005103!9.30e-07!17;UBERON:0000083!9.30e-07!17;UBERON:0009201!9.30e-07!17;UBERON:0004819!9.30e-07!17;UBERON:0006553!9.30e-07!17;UBERON:0003074!9.30e-07!17;UBERON:0003060!9.30e-07!17 | |ontology_enrichment_uberon=UBERON:0003104!2.05e-13!238;UBERON:0009142!2.05e-13!238;UBERON:0003914!7.06e-13!118;UBERON:0005256!4.13e-12!143;UBERON:0004290!2.48e-11!70;UBERON:0002049!3.87e-11!79;UBERON:0007798!3.87e-11!79;UBERON:0000490!4.20e-11!138;UBERON:0000914!4.38e-11!83;UBERON:0002329!4.38e-11!83;UBERON:0003077!4.38e-11!83;UBERON:0003059!4.38e-11!83;UBERON:0007282!4.38e-11!83;UBERON:0009618!4.38e-11!83;UBERON:0007285!4.38e-11!83;UBERON:0001637!7.93e-11!42;UBERON:0003509!7.93e-11!42;UBERON:0004572!7.93e-11!42;UBERON:0000486!1.33e-10!82;UBERON:0001981!1.48e-10!60;UBERON:0007500!1.48e-10!60;UBERON:0004537!1.48e-10!60;UBERON:0006965!1.48e-10!60;UBERON:0002100!2.86e-10!216;UBERON:0000055!2.89e-10!69;UBERON:0004872!1.16e-09!84;UBERON:0000119!5.06e-09!312;UBERON:0001134!1.28e-08!61;UBERON:0002036!1.28e-08!61;UBERON:0003082!1.28e-08!61;UBERON:0000483!1.95e-08!309;UBERON:0004573!8.06e-08!33;UBERON:0004571!8.06e-08!33;UBERON:0002385!1.42e-07!63;UBERON:0001015!1.42e-07!63;UBERON:0000383!1.42e-07!63;UBERON:0004211!1.61e-07!16;UBERON:0001285!1.61e-07!16;UBERON:0007684!1.61e-07!16;UBERON:0003220!1.61e-07!16;UBERON:0004208!1.61e-07!16;UBERON:0000481!6.02e-07!347;UBERON:0001048!8.71e-07!168;UBERON:0006555!9.30e-07!17;UBERON:0005103!9.30e-07!17;UBERON:0000083!9.30e-07!17;UBERON:0009201!9.30e-07!17;UBERON:0004819!9.30e-07!17;UBERON:0006553!9.30e-07!17;UBERON:0003074!9.30e-07!17;UBERON:0003060!9.30e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.29e-08;74!UBERON:0001637;5.64e-08;42!UBERON:0003509;5.64e-08;42!UBERON:0004572;5.64e-08;42!UBERON:0006555;7.75e-08;15!UBERON:0004819;7.75e-08;15!UBERON:0001285;7.75e-08;15!UBERON:0007684;7.75e-08;15!UBERON:0007500;8.02e-08;56!UBERON:0001981;8.02e-08;56!UBERON:0004537;8.02e-08;56!UBERON:0000353;2.63e-07;15!UBERON:0000025;2.98e-07;93!UBERON:0000072;3.47e-07;37!UBERON:0000490;4.34e-07;33!UBERON:0004573;4.77e-07;33!UBERON:0004571;4.77e-07;33!UBERON:0001225;6.51e-07;12!UBERON:0008987;6.51e-07;12 | |||
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| ||
|short_description=p1@RUVBL2 | |short_description=p1@RUVBL2 | ||
}} | }} |
Latest revision as of 05:52, 19 September 2015
Short description: | p1@RUVBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RUVBL2_5end |
Coexpression cluster: | C1171_Alveolar_Renal_Bronchial_Mesenchymal_Smooth_Keratinocyte_embryonic |
Association with transcript: | 0bp_to_ENST00000221413, NM_006666, uc002plr.1, uc002pls.1, uc010emn.1, uc010yab.1_5end |
EntrezGene: | RUVBL2 |
HGNC: | 10475 |
UniProt: | Q9Y230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.17e-21 | 250 |
epithelial cell | 5.53e-20 | 253 |
mesodermal cell | 1.14e-17 | 121 |
electrically responsive cell | 1.01e-10 | 61 |
electrically active cell | 1.01e-10 | 61 |
muscle cell | 2.82e-10 | 55 |
muscle precursor cell | 8.02e-10 | 58 |
myoblast | 8.02e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.02e-10 | 58 |
smooth muscle cell | 2.68e-09 | 43 |
smooth muscle myoblast | 2.68e-09 | 43 |
squamous epithelial cell | 1.11e-08 | 63 |
lining cell | 2.99e-08 | 58 |
barrier cell | 2.99e-08 | 58 |
epithelial cell of nephron | 8.18e-08 | 15 |
vascular associated smooth muscle cell | 8.26e-08 | 32 |
kidney cell | 2.94e-07 | 17 |
kidney epithelial cell | 2.94e-07 | 17 |
fibroblast | 4.14e-07 | 76 |
kidney cortical cell | 6.78e-07 | 12 |
renal cortical epithelial cell | 6.78e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.98e-14 | 235 |
disease of cellular proliferation | 1.18e-13 | 239 |
hematologic cancer | 3.71e-12 | 51 |
immune system cancer | 3.71e-12 | 51 |
leukemia | 1.26e-11 | 39 |
myeloid leukemia | 3.57e-11 | 31 |
organ system cancer | 2.32e-09 | 137 |