FFCP PHASE1:Hg19::chr6:52930264..52930275,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:52930264..52930275,+
|short_description=p4@FBXO9
|description=CAGE_peak_4_at_FBXO9_5end
|association_with_transcript=7bp_to_ENST00000323557,NM_033480,uc003...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26268 | |EntrezGene=26268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13588 | |HGNC=13588 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK97 | |UniProt=Q9UK97 | ||
|association_with_transcript=7bp_to_ENST00000323557,NM_033480,uc003pbl.2,uc003pbm.2,uc003pbn.2_5end | |||
|cluster_id=chr6:52930264..52930275,+ | |||
|description=CAGE_peak_4_at_FBXO9_5end | |||
|id=chr6:52930264..52930275,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.21e-10!115;UBERON:0001049!5.43e-08!57;UBERON:0005068!5.43e-08!57;UBERON:0006241!5.43e-08!57;UBERON:0007135!5.43e-08!57;UBERON:0001017!6.11e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.57e-11;22!UBERON:0001950;6.61e-11;20!UBERON:0000956;2.75e-09;25!UBERON:0000203;2.75e-09;25!UBERON:0001869;2.62e-08;32!UBERON:0003528;1.39e-07;34!UBERON:0002020;1.39e-07;34!UBERON:0004457;1.51e-07;9!UBERON:0000042;1.51e-07;9!UBERON:0001893;4.05e-07;34!UBERON:0002791;4.75e-07;32!UBERON:0003688;8.94e-07;6!UBERON:0002358;8.94e-07;6!UBERON:0003684;8.94e-07;6!UBERON:0001178;8.94e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.07e-13,81;UBERON:0001049,4.64e-12,56;UBERON:0005068,4.64e-12,56;UBERON:0006241,4.64e-12,56;UBERON:0007135,4.64e-12,56;UBERON:0000073,5.97e-12,53;UBERON:0002616,5.97e-12,53;UBERON:0002619,9.16e-12,22;UBERON:0001950,1.43e-11,20;UBERON:0001016,2.45e-11,89;UBERON:0000955,6.11e-11,68;UBERON:0006238,6.11e-11,68;UBERON:0000956,6.95e-10,25;UBERON:0000203,6.95e-10,25;UBERON:0007023,3.36e-09,114;UBERON:0003528,3.88e-09,34;UBERON:0002020,3.88e-09,34;UBERON:0001869,4.11e-09,32;UBERON:0002780,8.04e-09,41;UBERON:0001890,8.04e-09,41;UBERON:0003080,8.04e-09,41;UBERON:0006240,8.04e-09,41;UBERON:0001893,2.59e-08,34;UBERON:0003075,3.09e-08,82;UBERON:0007284,3.09e-08,82;UBERON:0002346,4.42e-08,86;UBERON:0002791,7.56e-08,32;UBERON:0010371,1.73e-07,104;UBERON:0003688,5.59e-07,6;UBERON:0002358,5.59e-07,6;UBERON:0003684,5.59e-07,6;UBERON:0001178,5.59e-07,6 | |||
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|phase1_expression=1.45342703416445,1.2846031433459,2.53717927372748,0,3.12872766099101,3.48935409640147,2.53299878168311,0.631719873426831,0.261185628199839,0.737201809504527,0,0.218441372130172,0.791300934685361,0.495065411840187,0,0.672325146451775,0,0,0.487932798790507,0.738726348460727,0,0.626909442956176,0,0.136874425072884,0.376627918784408,0.152826811495903,0.164201178899891,0.314843125254717,0.393364276848904,0,0,0,0,0,0.387336002901508,0.142169232487422,0.587200878669695,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,1.43846196161075,1.0246428261164,0.945928919554341,0.344745680736619,1.29096936716765,1.35426486594342,0,0,0.224723484445085,0,0.641858054152187,0,1.64925650093358,0.398927315243264,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0.334372990781356,0,0.473447805734733,1.94826728407911,0.334231370655521,0.883817722424512,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,1.04535523804977,0.226618685395132,0.766440987203842,0,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0,0.821127996921047,0,0.534880391567015,0.434473211648397,0,0,0.383587685530591,0,0,1.73815822752988,0,0.973269740605272,0.850813354476611,1.10864698731282,1.14185221401064,0.982343066232845,0,0.370784442784429,7.7891374477124,7.48757870386849,4.12169677608482,0.953962497221368,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,1.00416183829401,0.402829317109147,1.52054421143703,0.488124115096339,0.735326160691737,0,0.17859945656816,0.673588117878509,0.450445921933289,0,0,0.732806975721629,0,0,0.436094052142534,1.49091585508596,1.01304409331664,2.1185468930115,0.573673241497627,0.354668382198357,0.560677600142307,0,0.98667019366864,0.622422070799533,0.404132016209064,0.163461903113459,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.500474079487857,0.831192346452549,0.438977620880838,0.919463387397059,0.751190294532984,0.907457465280168,0.538168907066586,0,1.48352330811693,0,0.309157587715317,0.515281080091258,0.37223371266318,0.506328996723799,0.487185025805993,0.504867548488229,0.460249493211497,0.646584227275248,1.06502877754984,0.503760491138201,0.67824236924195,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0,0.10366105501537,0.504641701751257,0.36497735907583,0,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0.354920400119532,0.505754070234305,1.44606617930089,0.441175890929576,0,0.949082476444386,0.269662616320329,0.98110732562673,1.15424147083917,0.738155454624648,1.40241773803446,0.8231480226628,0,6.33775174109154,4.91413608338813,1.18157981336281,1.32438929824395,0.983907508344908,1.02940686179115,0.658501712451753,0,0,0,0,0,0,0,0.234817388471643,1.15493158208859,0.462985512576611,2.47330397904978,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0.93733833986777,0.335964256397719,0.425325291727159,0,0.290633938513962,0,1.97065295158377,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.444485260045183,0,0,0,0.102827492703324,0,0,0.784917590417525,0,0.8800594298514,0.646358578788889,0,0,0.531876233169741,2.08014873822732,0.514414748524284,2.83698264046557,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0.355391948742546,0,2.1100756394171,1.74306691720059,2.39935178836937,0,1.00451418286425,0,1.67737398844108,1.14861935834114,0,1.44781306667579,0.821905290201534,1.43248770591916,0,0.197030760201927,0.431255149719035,0.385029108839245,0.508189248444927,1.30139853857622,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,0.24538298343828,0,0,0.623912584592421,1.07057393278297,0.157702415033935,0.585707074963566,0.601892199455438,0,0,1.99267679560631,0.184369168541703,0.434418072340414,0.391602314925481,1.02943027143257,0.620304078368662,0.215714200818617,0.320182673410333,0.303127571446259,0,0.30239029332968,1.98486246255021,1.84154367945675,1.68396056659844,1.79394808957981,3.07024349440022,4.18220194973379,0,1.07946785661859,1.24293207719189,0.246381468041427,0,0.464841513839837,0.604297247958111,0.601519410909855,0,0.918515585316854,0.182091168006717,0.917870904715969,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.812839312631559,0,0,0.831076008928724,0,3.72741790298089,2.61435451024901,0,0.328014645699706,0.325378394664303,0.721287081534056,1.83138929636687,0.990113999047056,0,1.30012049207304,0,0.386682873168488,0.308097234229289,0.614014698904518,0.137836572484531,0.644521469209642,0.290033387828457,0.426133137080504,0.890320356467374,0.330569830721956,0.192190067365106,0.765676274967505,0.30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| ||
|short_description=p4@FBXO9 | |||
}} | }} |
Latest revision as of 06:48, 19 September 2015
Short description: | p4@FBXO9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FBXO9_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000323557, NM_033480, uc003pbl.2, uc003pbm.2, uc003pbn.2_5end |
EntrezGene: | FBXO9 |
HGNC: | 13588 |
UniProt: | Q9UK97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.07e-13 | 81 |
neural tube | 4.64e-12 | 56 |
neural rod | 4.64e-12 | 56 |
future spinal cord | 4.64e-12 | 56 |
neural keel | 4.64e-12 | 56 |
regional part of nervous system | 5.97e-12 | 53 |
regional part of brain | 5.97e-12 | 53 |
regional part of cerebral cortex | 9.16e-12 | 22 |
neocortex | 1.43e-11 | 20 |
nervous system | 2.45e-11 | 89 |
brain | 6.11e-11 | 68 |
future brain | 6.11e-11 | 68 |
cerebral cortex | 6.95e-10 | 25 |
pallium | 6.95e-10 | 25 |
adult organism | 3.36e-09 | 114 |
brain grey matter | 3.88e-09 | 34 |
gray matter | 3.88e-09 | 34 |
cerebral hemisphere | 4.11e-09 | 32 |
regional part of forebrain | 8.04e-09 | 41 |
forebrain | 8.04e-09 | 41 |
anterior neural tube | 8.04e-09 | 41 |
future forebrain | 8.04e-09 | 41 |
telencephalon | 2.59e-08 | 34 |
neural plate | 3.09e-08 | 82 |
presumptive neural plate | 3.09e-08 | 82 |
neurectoderm | 4.42e-08 | 86 |
regional part of telencephalon | 7.56e-08 | 32 |
ecto-epithelium | 1.73e-07 | 104 |
omentum | 5.59e-07 | 6 |
peritoneum | 5.59e-07 | 6 |
abdominal cavity | 5.59e-07 | 6 |
visceral peritoneum | 5.59e-07 | 6 |