FFCP PHASE1:Hg19::chr3:60066621..60066648,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2272 | |EntrezGene=2272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3701 | |HGNC=3701 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-55bp_to_ENST00000466788_5end | |association_with_transcript=-55bp_to_ENST00000466788_5end | ||
|cluster_id=chr3:60066621..60066648,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_FHIT_5end | |description=CAGE_peak_3_at_FHIT_5end | ||
|id=chr3:60066621..60066648,- | |id=chr3:60066621..60066648,- | ||
|ontology_enrichment_celltype=CL:0000791!1.06e-33!18;CL:0000789!1.06e-33!18;CL:0002420!1.06e-33!18;CL:0002419!1.06e-33!18;CL:0000790!1.06e-33!18;CL:0000838!1.18e-31!52;CL:0000084!5.21e-31!25;CL:0000827!5.21e-31!25;CL:0000542!7.13e-31!53;CL:0000051!7.13e-31!53;CL:0000625!2.22e-23!11;CL:0000738!2.91e-23!140;CL:0002087!4.58e-23!119;CL:0002031!8.38e-18!124;CL:0000037!2.26e-17!172;CL:0000566!2.26e-17!172;CL:0000988!1.12e-15!182;CL:0000624!3.11e-14!6;CL:0002032!9.29e-14!165;CL:0000837!9.29e-14!165;CL:0000898!8.28e-08!3;CL:0000842!1.13e-07!3;CL:0000623!1.26e-07!3;CL:0000825!1.26e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.06e-33!18;CL:0000789!1.06e-33!18;CL:0002420!1.06e-33!18;CL:0002419!1.06e-33!18;CL:0000790!1.06e-33!18;CL:0000838!1.18e-31!52;CL:0000084!5.21e-31!25;CL:0000827!5.21e-31!25;CL:0000542!7.13e-31!53;CL:0000051!7.13e-31!53;CL:0000625!2.22e-23!11;CL:0000738!2.91e-23!140;CL:0002087!4.58e-23!119;CL:0002031!8.38e-18!124;CL:0000037!2.26e-17!172;CL:0000566!2.26e-17!172;CL:0000988!1.12e-15!182;CL:0000624!3.11e-14!6;CL:0002032!9.29e-14!165;CL:0000837!9.29e-14!165;CL:0000898!8.28e-08!3;CL:0000842!1.13e-07!3;CL:0000623!1.26e-07!3;CL:0000825!1.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.93e-50;18!CL:0000789;3.93e-50;18!CL:0002419;3.93e-50;18!CL:0000084;8.44e-35;25!CL:0000625;2.51e-34;11!CL:0000624;1.43e-20;6!CL:0000542;6.94e-15;53!CL:0000898;6.13e-11;3!CL:0000226;9.56e-11;3!CL:0000842;9.56e-11;3!CL:0000623;1.11e-10;3!CL:0000815;1.16e-07;2!CL:0000792;1.16e-07;2!CL:0002677;1.16e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.71e-50,18;CL:0000789,3.71e-50,18;CL:0002420,3.71e-50,18;CL:0002419,3.71e-50,18;CL:0000790,3.71e-50,18;CL:0000084,8.09e-35,25;CL:0000827,8.09e-35,25;CL:0000625,2.39e-34,11;CL:0000838,1.22e-27,52;CL:0000542,5.32e-27,53;CL:0000051,5.32e-27,53;CL:0000624,1.41e-20,6;CL:0002087,3.80e-16,115;CL:0000738,9.69e-15,136;CL:0002031,1.76e-11,120;CL:0000037,2.14e-11,168;CL:0000898,6.13e-11,3;CL:0000226,9.72e-11,3;CL:0000842,9.72e-11,3;CL:0000623,1.14e-10,3;CL:0000825,1.14e-10,3;CL:0000988,1.98e-10,177;CL:0002032,1.64e-08,161;CL:0000837,1.64e-08,161;CL:0000815,1.16e-07,2;CL:0000792,1.16e-07,2;CL:0002677,1.16e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.93e-50;18!CL:0000051;6.94e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.85e-16!15;UBERON:0000179!5.85e-16!15;UBERON:0000463!5.85e-16!15;UBERON:0002193!2.91e-08!112;UBERON:0002390!4.47e-08!102;UBERON:0003061!4.47e-08!102;UBERON:0004177!2.32e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!5.85e-16!15;UBERON:0000179!5.85e-16!15;UBERON:0000463!5.85e-16!15;UBERON:0002193!2.91e-08!112;UBERON:0002390!4.47e-08!102;UBERON:0003061!4.47e-08!102;UBERON:0004177!2.32e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.81e-24;15!UBERON:0000179;6.81e-24;15!UBERON:0000463;6.81e-24;15!UBERON:0002390;4.98e-15;32!UBERON:0002193;1.60e-11;42!UBERON:0002370;3.96e-07;2!UBERON:0005058;3.96e-07;2!UBERON:0009113;3.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.66e-24,15;UBERON:0000179,6.66e-24,15;UBERON:0000463,6.66e-24,15;UBERON:0002370,6.75e-08,4;UBERON:0005058,6.75e-08,4;UBERON:0009113,6.75e-08,4;UBERON:0003295,6.75e-08,4;UBERON:0005562,6.75e-08,4 | |||
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| ||
|short_description=p3@FHIT | |short_description=p3@FHIT | ||
}} | }} |
Latest revision as of 07:22, 19 September 2015
Short description: | p3@FHIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FHIT_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -55bp_to_ENST00000466788_5end |
EntrezGene: | FHIT |
HGNC: | 3701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.71e-50 | 18 |
alpha-beta T cell | 3.71e-50 | 18 |
immature T cell | 3.71e-50 | 18 |
mature T cell | 3.71e-50 | 18 |
immature alpha-beta T cell | 3.71e-50 | 18 |
T cell | 8.09e-35 | 25 |
pro-T cell | 8.09e-35 | 25 |
CD8-positive, alpha-beta T cell | 2.39e-34 | 11 |
lymphoid lineage restricted progenitor cell | 1.22e-27 | 52 |
lymphocyte | 5.32e-27 | 53 |
common lymphoid progenitor | 5.32e-27 | 53 |
CD4-positive, alpha-beta T cell | 1.41e-20 | 6 |
nongranular leukocyte | 3.80e-16 | 115 |
leukocyte | 9.69e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.76e-11 | 120 |
hematopoietic stem cell | 2.14e-11 | 168 |
naive T cell | 6.13e-11 | 3 |
single nucleate cell | 9.72e-11 | 3 |
mononuclear cell | 9.72e-11 | 3 |
natural killer cell | 1.14e-10 | 3 |
pro-NK cell | 1.14e-10 | 3 |
hematopoietic cell | 1.98e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.64e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-08 | 161 |
regulatory T cell | 1.16e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.16e-07 | 2 |
naive regulatory T cell | 1.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.66e-24 | 15 |
haemolymphatic fluid | 6.66e-24 | 15 |
organism substance | 6.66e-24 | 15 |
thymus | 6.75e-08 | 4 |
hemolymphoid system gland | 6.75e-08 | 4 |
thymic region | 6.75e-08 | 4 |
pharyngeal gland | 6.75e-08 | 4 |
thymus primordium | 6.75e-08 | 4 |