FFCP PHASE1:Hg19::chr12:56120803..56120814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt=F8VV56 | |UniProt=F8VV56 | ||
|association_with_transcript=28bp_to_ENST00000548160_5end | |association_with_transcript=28bp_to_ENST00000548160_5end | ||
|cluster_id=chr12:56120803..56120814,- | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_38_at_CD63_5end | |description=CAGE_peak_38_at_CD63_5end | ||
|id=chr12:56120803..56120814,- | |id=chr12:56120803..56120814,- | ||
|ontology_enrichment_celltype=CL:0000235!2.07e-16!10;CL:0000569!1.98e-14!4;CL:0000011!1.98e-14!4;CL:0000840!2.32e-10!5;CL:0001029!2.32e-10!5;CL:0000064!4.54e-09!3;CL:0005012!4.54e-09!3;CL:0000067!4.54e-09!3;CL:0002304!4.54e-09!3;CL:0000839!1.83e-07!70;CL:0002566!2.17e-07!1;CL:0000557!2.45e-07!71;CL:0000990!4.74e-07!8;CL:0000766!9.50e-07!76 | |ontology_enrichment_celltype=CL:0000235!2.07e-16!10;CL:0000569!1.98e-14!4;CL:0000011!1.98e-14!4;CL:0000840!2.32e-10!5;CL:0001029!2.32e-10!5;CL:0000064!4.54e-09!3;CL:0005012!4.54e-09!3;CL:0000067!4.54e-09!3;CL:0002304!4.54e-09!3;CL:0000839!1.83e-07!70;CL:0002566!2.17e-07!1;CL:0000557!2.45e-07!71;CL:0000990!4.74e-07!8;CL:0000766!9.50e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.90e-38;6!CL:0000840;1.93e-17;5!CL:0000990;5.67e-12;8!CL:0000451;5.66e-10;10!CL:0000473;9.04e-07;39!CL:0000234;9.04e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.90e-38,6;CL:0000840,2.19e-17,5;CL:0001029,2.19e-17,5;CL:0000839,1.83e-13,66;CL:0000557,2.87e-13,67;CL:0000766,2.29e-12,72;CL:0000990,6.16e-12,8;CL:0002194,1.28e-10,59;CL:0000576,1.28e-10,59;CL:0000040,1.28e-10,59;CL:0000559,1.28e-10,59;CL:0002009,2.77e-10,61;CL:0000451,6.06e-10,10;CL:0000763,2.66e-08,108;CL:0000049,2.66e-08,108;CL:0002031,1.77e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!7.61e-14!2 | |ontology_enrichment_disease=DOID:1909!7.61e-14!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.29e-13;2!DOID:0060084;1.60e-09;3!DOID:127;1.60e-09;3!DOID:0060072;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.37e-13,2;DOID:0060084,1.54e-09,3;DOID:127,1.54e-09,3;DOID:0060072,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004765!1.47e-09!101;UBERON:0001434!1.47e-09!101;UBERON:0002371!3.19e-09!80;UBERON:0001778!4.54e-09!3;UBERON:0001775!4.54e-09!3;UBERON:0001474!1.98e-08!86;UBERON:0002204!1.76e-07!167;UBERON:0003112!2.47e-07!1;UBERON:0000032!2.47e-07!1;UBERON:0005253!2.47e-07!1;UBERON:0003128!2.47e-07!1;UBERON:0002241!2.47e-07!1;UBERON:0001703!2.47e-07!1;UBERON:0004761!2.47e-07!1;UBERON:0009617!2.47e-07!1;UBERON:0000488!5.22e-07!4;UBERON:0002390!8.96e-07!102;UBERON:0003061!8.96e-07!102 | |ontology_enrichment_uberon=UBERON:0004765!1.47e-09!101;UBERON:0001434!1.47e-09!101;UBERON:0002371!3.19e-09!80;UBERON:0001778!4.54e-09!3;UBERON:0001775!4.54e-09!3;UBERON:0001474!1.98e-08!86;UBERON:0002204!1.76e-07!167;UBERON:0003112!2.47e-07!1;UBERON:0000032!2.47e-07!1;UBERON:0005253!2.47e-07!1;UBERON:0003128!2.47e-07!1;UBERON:0002241!2.47e-07!1;UBERON:0001703!2.47e-07!1;UBERON:0004761!2.47e-07!1;UBERON:0009617!2.47e-07!1;UBERON:0000488!5.22e-07!4;UBERON:0002390!8.96e-07!102;UBERON:0003061!8.96e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.91e-12,76;UBERON:0001474,6.88e-11,82;UBERON:0004765,6.15e-10,90;UBERON:0002405,1.27e-09,93;UBERON:0002390,3.88e-09,98;UBERON:0003061,3.88e-09,98;UBERON:0001434,5.87e-09,100;UBERON:0002193,2.66e-08,108 | |||
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|short_description=p38@CD63 | |short_description=p38@CD63 | ||
}} | }} |
Latest revision as of 08:07, 19 September 2015
Short description: | p38@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_CD63_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 28bp_to_ENST00000548160_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | F8VV56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.90e-38 | 6 |
immature conventional dendritic cell | 2.19e-17 | 5 |
common dendritic progenitor | 2.19e-17 | 5 |
myeloid lineage restricted progenitor cell | 1.83e-13 | 66 |
granulocyte monocyte progenitor cell | 2.87e-13 | 67 |
myeloid leukocyte | 2.29e-12 | 72 |
conventional dendritic cell | 6.16e-12 | 8 |
monopoietic cell | 1.28e-10 | 59 |
monocyte | 1.28e-10 | 59 |
monoblast | 1.28e-10 | 59 |
promonocyte | 1.28e-10 | 59 |
macrophage dendritic cell progenitor | 2.77e-10 | 61 |
dendritic cell | 6.06e-10 | 10 |
myeloid cell | 2.66e-08 | 108 |
common myeloid progenitor | 2.66e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 1.77e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.91e-12 | 76 |
bone element | 6.88e-11 | 82 |
skeletal element | 6.15e-10 | 90 |
immune system | 1.27e-09 | 93 |
hematopoietic system | 3.88e-09 | 98 |
blood island | 3.88e-09 | 98 |
skeletal system | 5.87e-09 | 100 |
hemolymphoid system | 2.66e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.37e-13 | 2 |
cell type benign neoplasm | 1.54e-09 | 3 |
leiomyoma | 1.54e-09 | 3 |
benign neoplasm | 1.80e-07 | 4 |