FFCP PHASE1:Hg19::chr3:10334619..10334637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51738 | |EntrezGene=51738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18129 | |HGNC=18129 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBU3,E7ESW0 | |UniProt=Q9UBU3,E7ESW0 | ||
|association_with_transcript=0bp_to_ENST00000335542,ENST00000425479,NM_001134944,NM_001134945,NM_001134946,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137,NR_024138,uc003bvk.3,uc010hdc.2,uc010hdd.2,uc010hde.2,uc010hdf.2,uc010hdh.2,uc010hdi.2,uc010hdj.2,uc010hdk.2_5end | |association_with_transcript=0bp_to_ENST00000335542,ENST00000425479,NM_001134944,NM_001134945,NM_001134946,NR_024132,NR_024133,NR_024134,NR_024135,NR_024136,NR_024137,NR_024138,uc003bvk.3,uc010hdc.2,uc010hdd.2,uc010hde.2,uc010hdf.2,uc010hdh.2,uc010hdi.2,uc010hdj.2,uc010hdk.2_5end | ||
|cluster_id=chr3:10334619..10334637,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_GHRL_5end | |description=CAGE_peak_1_at_GHRL_5end | ||
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|ontology_enrichment_celltype=CL:0000763!7.10e-42!112;CL:0000049!7.10e-42!112;CL:0000037!8.40e-41!172;CL:0000566!8.40e-41!172;CL:0000988!1.03e-36!182;CL:0002032!4.02e-36!165;CL:0000837!4.02e-36!165;CL:0000766!5.34e-31!76;CL:0000738!1.50e-28!140;CL:0000557!7.08e-26!71;CL:0002009!2.08e-24!65;CL:0000839!2.70e-23!70;CL:0002057!2.77e-23!42;CL:0002194!1.13e-22!63;CL:0000576!1.13e-22!63;CL:0000040!1.13e-22!63;CL:0000559!1.13e-22!63;CL:0000860!6.54e-21!45;CL:0002031!1.49e-20!124;CL:0002087!1.02e-19!119;CL:0000094!1.40e-10!8;CL:0002393!1.11e-09!9;CL:0002397!1.11e-09!9;CL:0000081!4.74e-07!11 | |ontology_enrichment_celltype=CL:0000763!7.10e-42!112;CL:0000049!7.10e-42!112;CL:0000037!8.40e-41!172;CL:0000566!8.40e-41!172;CL:0000988!1.03e-36!182;CL:0002032!4.02e-36!165;CL:0000837!4.02e-36!165;CL:0000766!5.34e-31!76;CL:0000738!1.50e-28!140;CL:0000557!7.08e-26!71;CL:0002009!2.08e-24!65;CL:0000839!2.70e-23!70;CL:0002057!2.77e-23!42;CL:0002194!1.13e-22!63;CL:0000576!1.13e-22!63;CL:0000040!1.13e-22!63;CL:0000559!1.13e-22!63;CL:0000860!6.54e-21!45;CL:0002031!1.49e-20!124;CL:0002087!1.02e-19!119;CL:0000094!1.40e-10!8;CL:0002393!1.11e-09!9;CL:0002397!1.11e-09!9;CL:0000081!4.74e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.68e-18;39!CL:0000234;4.68e-18;39!CL:0000860;2.28e-17;33!CL:0002057;2.28e-17;33!CL:0000766;5.92e-17;69!CL:0000094;5.97e-17;8!CL:0002393;4.21e-15;6!CL:0002397;4.21e-15;6!CL:0000576;1.29e-14;48!CL:0000763;2.73e-14;100!CL:0000081;5.43e-12;11!CL:0000775;6.01e-10;3!CL:0000784;1.51e-09;3!CL:0000771;3.35e-07;2 | |ontology_enrichment_celltype_v019=CL:0000473;4.68e-18;39!CL:0000234;4.68e-18;39!CL:0000860;2.28e-17;33!CL:0002057;2.28e-17;33!CL:0000766;5.92e-17;69!CL:0000094;5.97e-17;8!CL:0002393;4.21e-15;6!CL:0002397;4.21e-15;6!CL:0000576;1.29e-14;48!CL:0000763;2.73e-14;100!CL:0000081;5.43e-12;11!CL:0000775;6.01e-10;3!CL:0000784;1.51e-09;3!CL:0000771;3.35e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.45e-43,108;CL:0000049,1.45e-43,108;CL:0000037,2.65e-35,168;CL:0000766,1.35e-34,72;CL:0000988,8.54e-33,177;CL:0002032,8.99e-31,161;CL:0000837,8.99e-31,161;CL:0002009,6.76e-29,61;CL:0000473,1.11e-28,48;CL:0000234,1.11e-28,48;CL:0000557,1.44e-27,67;CL:0000860,5.05e-26,42;CL:0002057,5.05e-26,42;CL:0002194,9.44e-26,59;CL:0000576,9.44e-26,59;CL:0000040,9.44e-26,59;CL:0000559,9.44e-26,59;CL:0000738,1.99e-25,136;CL:0000839,2.90e-22,66;CL:0000094,3.33e-17,8;CL:0002031,3.52e-15,120;CL:0002087,5.50e-15,115;CL:0000081,3.59e-12,11;CL:0000775,6.04e-10,3;CL:0002393,6.88e-10,9;CL:0002397,6.88e-10,9;CL:0000134,1.37e-09,354;CL:0000784,1.54e-09,3;CL:0002320,3.74e-09,361;CL:0000219,1.24e-07,386;CL:0000771,3.36e-07,2;CL:0000034,3.94e-07,441;CL:0000048,9.37e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-19;42!CL:0000049;4.26e-13;108 | |ontology_enrichment_development_v019=CL:0002057;1.24e-19;42!CL:0000049;4.26e-13;108 | ||
|ontology_enrichment_disease=DOID:8692!2.04e-12!31;DOID:1240!1.80e-08!39 | |ontology_enrichment_disease=DOID:8692!2.04e-12!31;DOID:1240!1.80e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.66e-08;31 | |ontology_enrichment_disease_v019=DOID:8692;3.66e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.58e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.38e-34!112;UBERON:0002390!5.19e-34!102;UBERON:0003061!5.19e-34!102;UBERON:0007023!1.46e-25!115;UBERON:0002371!1.97e-22!80;UBERON:0001474!1.08e-19!86;UBERON:0002405!1.73e-19!115;UBERON:0004765!4.52e-15!101;UBERON:0001434!4.52e-15!101;UBERON:0000178!5.89e-11!15;UBERON:0000179!5.89e-11!15;UBERON:0000463!5.89e-11!15;UBERON:0003081!9.93e-09!216 | |ontology_enrichment_uberon=UBERON:0002193!3.38e-34!112;UBERON:0002390!5.19e-34!102;UBERON:0003061!5.19e-34!102;UBERON:0007023!1.46e-25!115;UBERON:0002371!1.97e-22!80;UBERON:0001474!1.08e-19!86;UBERON:0002405!1.73e-19!115;UBERON:0004765!4.52e-15!101;UBERON:0001434!4.52e-15!101;UBERON:0000178!5.89e-11!15;UBERON:0000179!5.89e-11!15;UBERON:0000463!5.89e-11!15;UBERON:0003081!9.93e-09!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.52e-17;15!UBERON:0000179;2.52e-17;15!UBERON:0000463;2.52e-17;15!UBERON:0002390;2.97e-11;32!UBERON:0002193;3.09e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.52e-17;15!UBERON:0000179;2.52e-17;15!UBERON:0000463;2.52e-17;15!UBERON:0002390;2.97e-11;32!UBERON:0002193;3.09e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.77e-39,108;UBERON:0002390,6.97e-38,98;UBERON:0003061,6.97e-38,98;UBERON:0002405,1.37e-25,93;UBERON:0002371,2.66e-25,76;UBERON:0001474,7.61e-23,82;UBERON:0004765,4.40e-20,90;UBERON:0000178,2.40e-17,15;UBERON:0000179,2.40e-17,15;UBERON:0000463,2.40e-17,15;UBERON:0001434,2.93e-17,100;UBERON:0003081,2.34e-14,203;UBERON:0002384,1.46e-08,371;UBERON:0002204,2.77e-07,167 | |||
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| ||
|short_description=p1@GHRL | |short_description=p1@GHRL | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p1@GHRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GHRL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000335542, ENST00000425479, NM_001134944, NM_001134945, NM_001134946, NR_024132, NR_024133, NR_024134, NR_024135, NR_024136, NR_024137, NR_024138, uc003bvk.3, uc010hdc.2, uc010hdd.2, uc010hde.2, uc010hdf.2, uc010hdh.2, uc010hdi.2, uc010hdj.2, uc010hdk.2_5end |
EntrezGene: | GHRL |
HGNC: | 18129 |
UniProt: | Q9UBU3E7ESW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.77e-39 | 108 |
hematopoietic system | 6.97e-38 | 98 |
blood island | 6.97e-38 | 98 |
immune system | 1.37e-25 | 93 |
bone marrow | 2.66e-25 | 76 |
bone element | 7.61e-23 | 82 |
skeletal element | 4.40e-20 | 90 |
blood | 2.40e-17 | 15 |
haemolymphatic fluid | 2.40e-17 | 15 |
organism substance | 2.40e-17 | 15 |
skeletal system | 2.93e-17 | 100 |
lateral plate mesoderm | 2.34e-14 | 203 |
connective tissue | 1.46e-08 | 371 |
musculoskeletal system | 2.77e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.58e-08 | 31 |