FFCP PHASE1:Hg19::chr10:77036583..77036584,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=19120 | |HGNC=19120 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-179bp_to_ENST00000412453_5end | |association_with_transcript=-179bp_to_ENST00000412453_5end | ||
|cluster_id=chr10:77036583..77036584,- | |||
|description=CAGE_peak_1_at_HMGA1P5_5end | |description=CAGE_peak_1_at_HMGA1P5_5end | ||
|id=chr10:77036583..77036584,- | |id=chr10:77036583..77036584,- | ||
|ontology_enrichment_celltype=CL:0000548!1.23e-33!679;CL:0000004!1.23e-33!679;CL:0000255!1.23e-33!679;CL:0000012!6.62e-33!682;CL:0002321!3.49e-23!248;CL:0000066!1.35e-22!254;CL:0000220!1.44e-22!246;CL:0000003!1.32e-20!722;CL:0000144!2.40e-20!625;CL:0000222!8.86e-17!119;CL:0002371!8.01e-16!591;CL:0000183!1.07e-12!59;CL:0000055!8.82e-12!180;CL:0000187!1.41e-10!54;CL:0000393!2.06e-10!60;CL:0000211!2.06e-10!60;CL:0000680!2.23e-10!57;CL:0000056!2.23e-10!57;CL:0000355!2.23e-10!57;CL:0000063!4.86e-10!578;CL:1000449!1.53e-09!16;CL:0000115!2.15e-08!35;CL:0000192!2.50e-08!42;CL:0000514!2.50e-08!42;CL:1000507!3.16e-08!12;CL:1000494!3.16e-08!12;CL:0002078!4.40e-08!44;CL:1000497!6.71e-08!18;CL:0002518!6.71e-08!18;CL:0002681!1.21e-07!13;CL:0002584!1.21e-07!13;CL:0000076!1.70e-07!62;CL:0002139!1.94e-07!24;CL:0000071!5.45e-07!18;CL:0002546!5.45e-07!18 | |ontology_enrichment_celltype=CL:0000548!1.23e-33!679;CL:0000004!1.23e-33!679;CL:0000255!1.23e-33!679;CL:0000012!6.62e-33!682;CL:0002321!3.49e-23!248;CL:0000066!1.35e-22!254;CL:0000220!1.44e-22!246;CL:0000003!1.32e-20!722;CL:0000144!2.40e-20!625;CL:0000222!8.86e-17!119;CL:0002371!8.01e-16!591;CL:0000183!1.07e-12!59;CL:0000055!8.82e-12!180;CL:0000187!1.41e-10!54;CL:0000393!2.06e-10!60;CL:0000211!2.06e-10!60;CL:0000680!2.23e-10!57;CL:0000056!2.23e-10!57;CL:0000355!2.23e-10!57;CL:0000063!4.86e-10!578;CL:1000449!1.53e-09!16;CL:0000115!2.15e-08!35;CL:0000192!2.50e-08!42;CL:0000514!2.50e-08!42;CL:1000507!3.16e-08!12;CL:1000494!3.16e-08!12;CL:0002078!4.40e-08!44;CL:1000497!6.71e-08!18;CL:0002518!6.71e-08!18;CL:0002681!1.21e-07!13;CL:0002584!1.21e-07!13;CL:0000076!1.70e-07!62;CL:0002139!1.94e-07!24;CL:0000071!5.45e-07!18;CL:0002546!5.45e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.68e-11;15!CL:1000507;2.92e-09;10!CL:1000494;2.92e-09;10!CL:1000497;3.92e-09;17!CL:0002518;3.92e-09;17!CL:0002681;5.06e-09;12!CL:0002584;5.06e-09;12!CL:0000115;1.13e-08;36!CL:0002139;3.51e-07;24!CL:0000071;6.11e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.28e-19,250;CL:0000222,4.21e-18,121;CL:0000066,4.87e-15,253;CL:1000449,2.32e-11,15;CL:0000187,2.69e-10,55;CL:0000393,2.92e-10,61;CL:0000211,2.92e-10,61;CL:0000115,5.09e-10,36;CL:0002078,9.30e-10,45;CL:0000680,9.93e-10,58;CL:0000056,9.93e-10,58;CL:0000355,9.93e-10,58;CL:1000507,3.18e-09,10;CL:1000494,3.18e-09,10;CL:1000497,3.45e-09,17;CL:0002518,3.45e-09,17;CL:0002681,4.56e-09,12;CL:0002584,4.56e-09,12;CL:0000192,6.05e-08,43;CL:0000514,6.05e-08,43;CL:0000213,9.05e-08,58;CL:0000215,9.05e-08,58;CL:0000076,1.04e-07,63;CL:0002139,1.53e-07,24;CL:0000071,3.52e-07,18;CL:0002546,3.52e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;6.11e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!1.45e-10!239;DOID:162!1.75e-09!235;DOID:305!7.31e-07!106 | |ontology_enrichment_disease=DOID:14566!1.45e-10!239;DOID:162!1.75e-09!235;DOID:305!7.31e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!6.53e-13!82;UBERON:0005256!7.08e-13!143;UBERON:0004290!8.35e-13!70;UBERON:0000490!1.38e-12!138;UBERON:0002049!1.38e-12!79;UBERON:0007798!1.38e-12!79;UBERON:0002100!4.08e-12!216;UBERON:0003914!6.50e-12!118;UBERON:0000914!1.06e-11!83;UBERON:0002329!1.06e-11!83;UBERON:0003077!1.06e-11!83;UBERON:0003059!1.06e-11!83;UBERON:0007282!1.06e-11!83;UBERON:0009618!1.06e-11!83;UBERON:0007285!1.06e-11!83;UBERON:0003104!5.65e-11!238;UBERON:0009142!5.65e-11!238;UBERON:0000055!6.28e-11!69;UBERON:0004211!1.53e-09!16;UBERON:0001285!1.53e-09!16;UBERON:0007684!1.53e-09!16;UBERON:0003220!1.53e-09!16;UBERON:0004208!1.53e-09!16;UBERON:0001981!1.97e-09!60;UBERON:0007500!1.97e-09!60;UBERON:0004537!1.97e-09!60;UBERON:0006965!1.97e-09!60;UBERON:0001134!2.16e-09!61;UBERON:0002036!2.16e-09!61;UBERON:0003082!2.16e-09!61;UBERON:0002385!1.48e-08!63;UBERON:0001015!1.48e-08!63;UBERON:0000383!1.48e-08!63;UBERON:0006555!2.40e-08!17;UBERON:0005103!2.40e-08!17;UBERON:0000083!2.40e-08!17;UBERON:0009201!2.40e-08!17;UBERON:0004819!2.40e-08!17;UBERON:0006553!2.40e-08!17;UBERON:0003074!2.40e-08!17;UBERON:0003060!2.40e-08!17;UBERON:0000119!2.61e-08!312;UBERON:0001637!2.73e-08!42;UBERON:0003509!2.73e-08!42;UBERON:0004572!2.73e-08!42;UBERON:0009773!3.16e-08!12;UBERON:0001231!3.16e-08!12;UBERON:0004810!3.16e-08!12;UBERON:0000464!5.87e-08!104;UBERON:0000483!8.15e-08!309;UBERON:0001225!1.21e-07!13;UBERON:0008987!1.21e-07!13;UBERON:0000466!1.81e-07!126;UBERON:0004872!2.11e-07!84;UBERON:0003886!2.22e-07!63;UBERON:0000353!2.26e-07!17;UBERON:0000080!2.58e-07!18;UBERON:0002120!2.58e-07!18;UBERON:0004875!2.58e-07!18;UBERON:0005721!2.58e-07!18;UBERON:0005754!2.58e-07!18;UBERON:0007297!2.58e-07!18;UBERON:0000487!2.98e-07!22;UBERON:0001048!4.80e-07!168;UBERON:0001986!5.45e-07!18;UBERON:0004638!5.45e-07!18;UBERON:0004852!5.45e-07!18 | |ontology_enrichment_uberon=UBERON:0000486!6.53e-13!82;UBERON:0005256!7.08e-13!143;UBERON:0004290!8.35e-13!70;UBERON:0000490!1.38e-12!138;UBERON:0002049!1.38e-12!79;UBERON:0007798!1.38e-12!79;UBERON:0002100!4.08e-12!216;UBERON:0003914!6.50e-12!118;UBERON:0000914!1.06e-11!83;UBERON:0002329!1.06e-11!83;UBERON:0003077!1.06e-11!83;UBERON:0003059!1.06e-11!83;UBERON:0007282!1.06e-11!83;UBERON:0009618!1.06e-11!83;UBERON:0007285!1.06e-11!83;UBERON:0003104!5.65e-11!238;UBERON:0009142!5.65e-11!238;UBERON:0000055!6.28e-11!69;UBERON:0004211!1.53e-09!16;UBERON:0001285!1.53e-09!16;UBERON:0007684!1.53e-09!16;UBERON:0003220!1.53e-09!16;UBERON:0004208!1.53e-09!16;UBERON:0001981!1.97e-09!60;UBERON:0007500!1.97e-09!60;UBERON:0004537!1.97e-09!60;UBERON:0006965!1.97e-09!60;UBERON:0001134!2.16e-09!61;UBERON:0002036!2.16e-09!61;UBERON:0003082!2.16e-09!61;UBERON:0002385!1.48e-08!63;UBERON:0001015!1.48e-08!63;UBERON:0000383!1.48e-08!63;UBERON:0006555!2.40e-08!17;UBERON:0005103!2.40e-08!17;UBERON:0000083!2.40e-08!17;UBERON:0009201!2.40e-08!17;UBERON:0004819!2.40e-08!17;UBERON:0006553!2.40e-08!17;UBERON:0003074!2.40e-08!17;UBERON:0003060!2.40e-08!17;UBERON:0000119!2.61e-08!312;UBERON:0001637!2.73e-08!42;UBERON:0003509!2.73e-08!42;UBERON:0004572!2.73e-08!42;UBERON:0009773!3.16e-08!12;UBERON:0001231!3.16e-08!12;UBERON:0004810!3.16e-08!12;UBERON:0000464!5.87e-08!104;UBERON:0000483!8.15e-08!309;UBERON:0001225!1.21e-07!13;UBERON:0008987!1.21e-07!13;UBERON:0000466!1.81e-07!126;UBERON:0004872!2.11e-07!84;UBERON:0003886!2.22e-07!63;UBERON:0000353!2.26e-07!17;UBERON:0000080!2.58e-07!18;UBERON:0002120!2.58e-07!18;UBERON:0004875!2.58e-07!18;UBERON:0005721!2.58e-07!18;UBERON:0005754!2.58e-07!18;UBERON:0007297!2.58e-07!18;UBERON:0000487!2.98e-07!22;UBERON:0001048!4.80e-07!168;UBERON:0001986!5.45e-07!18;UBERON:0004638!5.45e-07!18;UBERON:0004852!5.45e-07!18 | ||
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| ||
|short_description=p1@HMGA1P5 | |short_description=p1@HMGA1P5 | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p1@HMGA1P5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMGA1P5_5end |
Coexpression cluster: | NA |
Association with transcript: | -179bp_to_ENST00000412453_5end |
EntrezGene: | NA |
HGNC: | 19120 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.28e-19 | 250 |
mesodermal cell | 4.21e-18 | 121 |
epithelial cell | 4.87e-15 | 253 |
epithelial cell of nephron | 2.32e-11 | 15 |
muscle cell | 2.69e-10 | 55 |
electrically responsive cell | 2.92e-10 | 61 |
electrically active cell | 2.92e-10 | 61 |
endothelial cell | 5.09e-10 | 36 |
meso-epithelial cell | 9.30e-10 | 45 |
muscle precursor cell | 9.93e-10 | 58 |
myoblast | 9.93e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.93e-10 | 58 |
kidney tubule cell | 3.18e-09 | 10 |
nephron tubule epithelial cell | 3.18e-09 | 10 |
kidney cell | 3.45e-09 | 17 |
kidney epithelial cell | 3.45e-09 | 17 |
kidney cortical cell | 4.56e-09 | 12 |
renal cortical epithelial cell | 4.56e-09 | 12 |
smooth muscle cell | 6.05e-08 | 43 |
smooth muscle myoblast | 6.05e-08 | 43 |
lining cell | 9.05e-08 | 58 |
barrier cell | 9.05e-08 | 58 |
squamous epithelial cell | 1.04e-07 | 63 |
endothelial cell of vascular tree | 1.53e-07 | 24 |
blood vessel endothelial cell | 3.52e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.52e-07 | 18 |