FFCP PHASE1:Hg19::chr22:24407847..24407910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23523 | |EntrezGene=23523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24187 | |HGNC=24187 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6J0,C9J068,F5H5W5,Q8IVX9 | |UniProt=Q9Y6J0,C9J068,F5H5W5,Q8IVX9 | ||
|association_with_transcript=0bp_to_ENST00000398319,ENST00000445422,ENST00000536026,uc002zzk.1,uc002zzl.1_5end | |association_with_transcript=0bp_to_ENST00000398319,ENST00000445422,ENST00000536026,uc002zzk.1,uc002zzl.1_5end | ||
|cluster_id=chr22:24407847..24407910,+ | |||
|description=CAGE_peak_1_at_CABIN1_5end | |description=CAGE_peak_1_at_CABIN1_5end | ||
|id=chr22:24407847..24407910,+ | |id=chr22:24407847..24407910,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.60e-12!194;UBERON:0000119!4.56e-12!312;UBERON:0004111!8.24e-12!241;UBERON:0000483!1.04e-11!309;UBERON:0000477!1.04e-09!286;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0002616!4.78e-08!59;UBERON:0001017!5.66e-08!82;UBERON:0003075!7.45e-08!86;UBERON:0007284!7.45e-08!86;UBERON:0000475!1.69e-07!365;UBERON:0005743!1.74e-07!86;UBERON:0000955!2.59e-07!69;UBERON:0006238!2.59e-07!69;UBERON:0003914!3.07e-07!118;UBERON:0003056!3.16e-07!61;UBERON:0002049!3.57e-07!79;UBERON:0007798!3.57e-07!79;UBERON:0002346!9.77e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.06e-12,309;UBERON:0000025,3.57e-12,192;UBERON:0000483,7.04e-12,306;UBERON:0004111,1.87e-11,240;UBERON:0003075,1.89e-08,82;UBERON:0007284,1.89e-08,82;UBERON:0001049,2.68e-08,56;UBERON:0005068,2.68e-08,56;UBERON:0006241,2.68e-08,56;UBERON:0007135,2.68e-08,56;UBERON:0001017,9.65e-08,81;UBERON:0000073,1.68e-07,53;UBERON:0002616,1.68e-07,53;UBERON:0003914,2.50e-07,117;UBERON:0002346,3.06e-07,86;UBERON:0003056,3.13e-07,61;UBERON:0002049,3.74e-07,78;UBERON:0007798,3.74e-07,78;UBERON:0000955,4.44e-07,68;UBERON:0006238,4.44e-07,68 | |||
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| ||
|short_description=p1@CABIN1 | |short_description=p1@CABIN1 | ||
}} | }} |
Latest revision as of 10:06, 19 September 2015
Short description: | p1@CABIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CABIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398319, ENST00000445422, ENST00000536026, uc002zzk.1, uc002zzl.1_5end |
EntrezGene: | CABIN1 |
HGNC: | 24187 |
UniProt: | Q9Y6J0C9J068F5H5W5Q8IVX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 3.06e-12 | 309 |
tube | 3.57e-12 | 192 |
epithelium | 7.04e-12 | 306 |
anatomical conduit | 1.87e-11 | 240 |
neural plate | 1.89e-08 | 82 |
presumptive neural plate | 1.89e-08 | 82 |
neural tube | 2.68e-08 | 56 |
neural rod | 2.68e-08 | 56 |
future spinal cord | 2.68e-08 | 56 |
neural keel | 2.68e-08 | 56 |
central nervous system | 9.65e-08 | 81 |
regional part of nervous system | 1.68e-07 | 53 |
regional part of brain | 1.68e-07 | 53 |
epithelial tube | 2.50e-07 | 117 |
neurectoderm | 3.06e-07 | 86 |
pre-chordal neural plate | 3.13e-07 | 61 |
vasculature | 3.74e-07 | 78 |
vascular system | 3.74e-07 | 78 |
brain | 4.44e-07 | 68 |
future brain | 4.44e-07 | 68 |