FFCP PHASE1:Hg19::chr3:111852128..111852139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257144 | |EntrezGene=257144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20253 | |HGNC=20253 | ||
|TSSclassifier=strong | |||
|UniProt=C9IY73,Q8N6F7 | |UniProt=C9IY73,Q8N6F7 | ||
|association_with_transcript=-11bp_to_ENST00000487901,uc003dys.1,uc003dyt.1_5end | |association_with_transcript=-11bp_to_ENST00000487901,uc003dys.1,uc003dyt.1_5end | ||
|cluster_id=chr3:111852128..111852139,- | |||
|coexpression_cluster_id=C4267 | |coexpression_cluster_id=C4267 | ||
|description=CAGE_peak_2_at_GCET2_5end | |description=CAGE_peak_2_at_GCET2_5end | ||
|id=chr3:111852128..111852139,- | |id=chr3:111852128..111852139,- | ||
|ontology_enrichment_celltype=CL:0000542!2.13e-46!53;CL:0000051!2.13e-46!53;CL:0000838!4.47e-45!52;CL:0000945!8.55e-24!24;CL:0000826!8.55e-24!24;CL:0000738!1.62e-22!140;CL:0002087!5.17e-20!119;CL:0000791!5.89e-20!18;CL:0000789!5.89e-20!18;CL:0002420!5.89e-20!18;CL:0002419!5.89e-20!18;CL:0000790!5.89e-20!18;CL:0000084!5.75e-19!25;CL:0000827!5.75e-19!25;CL:0000988!1.69e-18!182;CL:0002031!2.69e-18!124;CL:0000037!4.56e-18!172;CL:0000566!4.56e-18!172;CL:0000625!1.41e-16!11;CL:0002032!4.70e-16!165;CL:0000837!4.70e-16!165;CL:0000236!2.25e-12!14;CL:0000080!2.13e-08!6 | |ontology_enrichment_celltype=CL:0000542!2.13e-46!53;CL:0000051!2.13e-46!53;CL:0000838!4.47e-45!52;CL:0000945!8.55e-24!24;CL:0000826!8.55e-24!24;CL:0000738!1.62e-22!140;CL:0002087!5.17e-20!119;CL:0000791!5.89e-20!18;CL:0000789!5.89e-20!18;CL:0002420!5.89e-20!18;CL:0002419!5.89e-20!18;CL:0000790!5.89e-20!18;CL:0000084!5.75e-19!25;CL:0000827!5.75e-19!25;CL:0000988!1.69e-18!182;CL:0002031!2.69e-18!124;CL:0000037!4.56e-18!172;CL:0000566!4.56e-18!172;CL:0000625!1.41e-16!11;CL:0002032!4.70e-16!165;CL:0000837!4.70e-16!165;CL:0000236!2.25e-12!14;CL:0000080!2.13e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.05e-35;24!CL:0000542;4.28e-28;53!CL:0000625;1.69e-25;11!CL:0000791;1.95e-23;18!CL:0000789;1.95e-23;18!CL:0002419;1.95e-23;18!CL:0000084;6.03e-20;25!CL:0000236;6.03e-12;13!CL:0000453;7.24e-09;5!CL:0002087;7.55e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.89e-50,52;CL:0000542,4.44e-49,53;CL:0000051,4.44e-49,53;CL:0000945,1.92e-35,24;CL:0000826,1.92e-35,24;CL:0000625,2.21e-25,11;CL:0000791,1.92e-23,18;CL:0000789,1.92e-23,18;CL:0002420,1.92e-23,18;CL:0002419,1.92e-23,18;CL:0000790,1.92e-23,18;CL:0000738,5.75e-22,136;CL:0000084,5.41e-20,25;CL:0000827,5.41e-20,25;CL:0002087,3.11e-19,115;CL:0002031,3.37e-18,120;CL:0000037,1.47e-16,168;CL:0002032,3.85e-16,161;CL:0000837,3.85e-16,161;CL:0000988,2.18e-15,177;CL:0000236,4.01e-15,14;CL:0000817,4.54e-15,3;CL:0000785,6.41e-11,2;CL:0000955,6.41e-11,2;CL:0000818,6.41e-11,2;CL:0000954,6.41e-11,2;CL:0000816,6.41e-11,2;CL:0000453,4.32e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000051;4.28e-28;53!CL:0000790;1.95e-23;18!CL:0000954;7.74e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!5.56e-10!10 | |ontology_enrichment_disease=DOID:0060058!5.56e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;5.46e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.23e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.92e-08!15;UBERON:0000179!1.92e-08!15;UBERON:0000463!1.92e-08!15;UBERON:0004177!6.33e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!1.92e-08!15;UBERON:0000179!1.92e-08!15;UBERON:0000463!1.92e-08!15;UBERON:0004177!6.33e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.37e-11;2!UBERON:0005058;9.37e-11;2!UBERON:0009113;9.37e-11;2!UBERON:0004177;1.87e-09;5!UBERON:0005057;1.87e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.58e-11,4;UBERON:0005058,2.58e-11,4;UBERON:0009113,2.58e-11,4;UBERON:0003295,2.58e-11,4;UBERON:0005562,2.58e-11,4;UBERON:0004177,2.98e-11,7;UBERON:0005057,2.98e-11,7;UBERON:0003351,1.11e-07,6;UBERON:0001042,1.22e-07,10;UBERON:0009145,1.22e-07,10;UBERON:0000974,1.29e-07,10;UBERON:0006562,6.00e-07,11 | |||
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| ||
|short_description=p2@GCET2 | |short_description=p2@GCET2 | ||
}} | }} |
Latest revision as of 13:24, 19 September 2015
Short description: | p2@GCET2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GCET2_5end |
Coexpression cluster: | C4267_splenic_plasma_Burkitt_diffuse_xeroderma_b_migratory |
Association with transcript: | -11bp_to_ENST00000487901, uc003dys.1, uc003dyt.1_5end |
EntrezGene: | GCET2 |
HGNC: | 20253 |
UniProt: | C9IY73Q8N6F7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.89e-50 | 52 |
lymphocyte | 4.44e-49 | 53 |
common lymphoid progenitor | 4.44e-49 | 53 |
lymphocyte of B lineage | 1.92e-35 | 24 |
pro-B cell | 1.92e-35 | 24 |
CD8-positive, alpha-beta T cell | 2.21e-25 | 11 |
mature alpha-beta T cell | 1.92e-23 | 18 |
alpha-beta T cell | 1.92e-23 | 18 |
immature T cell | 1.92e-23 | 18 |
mature T cell | 1.92e-23 | 18 |
immature alpha-beta T cell | 1.92e-23 | 18 |
leukocyte | 5.75e-22 | 136 |
T cell | 5.41e-20 | 25 |
pro-T cell | 5.41e-20 | 25 |
nongranular leukocyte | 3.11e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 3.37e-18 | 120 |
hematopoietic stem cell | 1.47e-16 | 168 |
hematopoietic oligopotent progenitor cell | 3.85e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.85e-16 | 161 |
hematopoietic cell | 2.18e-15 | 177 |
B cell | 4.01e-15 | 14 |
precursor B cell | 4.54e-15 | 3 |
mature B cell | 6.41e-11 | 2 |
pre-B-II cell | 6.41e-11 | 2 |
transitional stage B cell | 6.41e-11 | 2 |
small pre-B-II cell | 6.41e-11 | 2 |
immature B cell | 6.41e-11 | 2 |
Langerhans cell | 4.32e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.58e-11 | 4 |
hemolymphoid system gland | 2.58e-11 | 4 |
thymic region | 2.58e-11 | 4 |
pharyngeal gland | 2.58e-11 | 4 |
thymus primordium | 2.58e-11 | 4 |
hemopoietic organ | 2.98e-11 | 7 |
immune organ | 2.98e-11 | 7 |
pharyngeal epithelium | 1.11e-07 | 6 |
chordate pharynx | 1.22e-07 | 10 |
pharyngeal region of foregut | 1.22e-07 | 10 |
neck | 1.29e-07 | 10 |
pharynx | 6.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.23e-12 | 10 |