FFCP PHASE1:Hg19::chr6:10528560..10528589,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:10528560..10528589,+ to FFCP PHASE1:Hg19::chr6:10528560..10528589,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0V5 | |UniProt=Q8N0V5 | ||
|association_with_transcript=0bp_to_ENST00000379597,uc003mzc.3_5end | |||
|cluster_id=chr6:10528560..10528589,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_5_at_GCNT2_5end | |||
|id=chr6:10528560..10528589,+ | |||
|ontology_enrichment_celltype=CL:0002009!7.91e-22!65;CL:0002087!9.02e-22!119;CL:0002194!7.68e-21!63;CL:0000576!7.68e-21!63;CL:0000040!7.68e-21!63;CL:0000559!7.68e-21!63;CL:0000738!4.98e-20!140;CL:0000037!4.44e-19!172;CL:0000566!4.44e-19!172;CL:0002031!5.31e-19!124;CL:0000839!8.17e-18!70;CL:0000557!9.53e-18!71;CL:0002032!1.45e-17!165;CL:0000837!1.45e-17!165;CL:0000988!1.50e-16!182;CL:0000860!5.53e-16!45;CL:0000763!3.95e-15!112;CL:0000049!3.95e-15!112;CL:0000766!9.18e-15!76;CL:0002057!1.09e-14!42;CL:0000451!4.71e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.70e-14;39!CL:0000234;4.70e-14;39!CL:0000576;4.95e-12;48!CL:0000860;5.58e-12;33!CL:0002057;5.58e-12;33!CL:0000766;1.93e-09;69!CL:0000451;5.56e-09;10!CL:0000990;5.81e-09;8!CL:0000235;9.80e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.03e-28,61;CL:0002194,2.03e-26,59;CL:0000576,2.03e-26,59;CL:0000040,2.03e-26,59;CL:0000559,2.03e-26,59;CL:0000557,3.44e-24,67;CL:0000839,3.25e-23,66;CL:0000473,7.94e-22,48;CL:0000234,7.94e-22,48;CL:0002087,2.37e-19,115;CL:0000766,3.86e-19,72;CL:0000738,7.05e-19,136;CL:0000763,9.99e-19,108;CL:0000049,9.99e-19,108;CL:0000037,5.89e-17,168;CL:0002031,6.86e-17,120;CL:0000860,2.36e-16,42;CL:0002057,2.36e-16,42;CL:0002032,1.94e-15,161;CL:0000837,1.94e-15,161;CL:0000988,4.74e-15,177;CL:0000990,7.03e-10,8;CL:0000451,8.30e-10,10;CL:0000235,7.03e-08,6;CL:0000148,9.24e-07,10;CL:0000541,9.24e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.13e-18!112;UBERON:0002390!1.55e-16!102;UBERON:0003061!1.55e-16!102;UBERON:0002371!8.13e-15!80;UBERON:0002405!4.59e-14!115;UBERON:0001474!4.20e-12!86;UBERON:0007023!4.50e-09!115;UBERON:0004765!1.07e-07!101;UBERON:0001434!1.07e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.67e-23,108;UBERON:0002390,4.56e-21,98;UBERON:0003061,4.56e-21,98;UBERON:0002405,9.66e-21,93;UBERON:0002371,1.29e-20,76;UBERON:0001474,4.68e-18,82;UBERON:0004765,3.27e-15,90;UBERON:0001434,2.35e-12,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.958120975510189,1.25542639594803,0.993374274723366,0.57470412614962,0.865818594450472,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0.852139206383318,2.13253848731132,0.293600439334847,0.553995408531877,0.200544447470142,0.651032612147555,4.25439401055856,2.26725566213286,3.8636335145128,2.76256653681173,1.51150377475524,1.94067248950253,0.464858073811369,1.23350366406548,1.85823822537062,1.1507695692886,1.5369642391746,2.60130452877444,1.03423704220986,0,2.70852973188684,1.50593871634084,1.36453075028923,1.12361742222542,0.918251677112708,1.92557416245656,1.27867425159808,1.9791078011203,1.59570926097305,0.852449501065388,0,0,0.622822248995575,0.502497330513487,0.521482918420201,3.04064382587163,0.605399502633369,2.94622108790052,2.21523671208619,3.59133986730301,4.67729459923096,1.46761051855863,4.38081661471331,5.85689882081875,5.46466994770072,1.42506371870624,2.98375015798635,1.64397738388171,1.75996244461323,0.546138611262131,1.77901850772711,2.98711155796555,1.60158394814405,0.574752439954483,0,3.81621501814146,1.70763890732835,0,0.382273228125229,1.32171328579026,1.12101712596307,0.526768169550154,0.590129310341499,0,0.616804496998528,0.334372990781356,1.30368906653436,0.946895611469467,1.94826728407911,0.334231370655521,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,0.493313713811028,0,1.73881851441031,1.77943875794473,0.535081656179426,0,0.113309342697566,0.383220493601921,0.34362744548263,1.01207876807801,0,0,0.950452044448374,1.05402583354441,0.639933055772092,0,0.710331756132051,0,0.80642697289893,0,0.289648807765598,0,0.670700859703636,0,0,0,0.144846518960824,0,0,1.03988298880475,0.443458794925128,0.614843499851882,0.916853528483988,0,0,1.62273696827342,1.74129737299267,1.59549552622638,1.90792499444274,0.571994910780128,3.34311751196608,0.596287222100115,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,2.13459757612026,1.67360306382335,0.402829317109147,0.760272105718513,0.24406205754817,0,0,1.87529429396568,0.673588117878509,1.12611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8929088006375,1.68584690078102,1.92808823906786,1.43382164552112,1.08939722046203,1.42362371466658,0.808987848960987,1.56977172100277,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0.433099343283221,1.38895653772983,1.14152491340759,0,0,5.41677413392274,1.63802985597466,2.52672975890838,0,0,0,0,0,0,0,0,0,0,0,6.1592957463404,4.58386110669933,4.68869788840188,1.71072446022705,7.09509699652932,7.80891950394185,13.4338423336372,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,4.21667878966063,0,0,0,0,0.410952645100767,0,0.336255431980582,0.197030760201927,0,0.256686072559497,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.6541442089831,2.15714200818617,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.552485933615378,0,0,0,0.451199612907412,1.69433741629712,0,0,2.11103257785751,0,0.680374821106063,0,0,0.270946437543853,0,2.29388645740534,0,1.56712328305525,0.438519753291869,1.0457418040996,0.512900250232778,0.656029291399411,0.976135183992909,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0,0,0,0.18532421910392,0.858749320451947,0,0.949138274156178,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0.229723400206959,1.52234282769651,0,3.41788312304498,0.714695326373367,1.23408681925858,0.648473311192717,1.62009431171434,1.58625035258854,2.02965735142199,0,4.16568367167754,1.30062222588003,0,0.213425530045242,0,0.399158742865633,1.1490322207942,0.635020748171649,0,0.842391534340376,0,0,0,0.169291777801603,0.321176150207399,0.403599414382095,1.70338495076131,0.343505344755765,0,0,0.166849141711909,1.75849285861836,2.22724939116194,0,1.35227839237992,0,1.4098700508785,0,0.439524537815682,0,1.22587722705226,2.27308917445131,0,0,0,0,0.844016498463076,0,0,0,0.996239941255349,0.552567831062295,4.03092396566842,1.02268682502155,0.615424027305347,0,0.718946809178615,1.07412704805365,0,0.295930216910801,0,0,0,0.185536196323703,0,0,1.13697999995054,1.44999915086959,0,0.762760950878299,0,0,0,0,0.885741385813839,0.361789315876224,0,0.442317039724898,0.295547618953547,0.219385397153973,1.85195387982283,0,0.307801034015188,0.227884111694002,0,0,0,0,0,0,0,0.470940769185074,0.664846727600626,0,0,0,0,1.43042921082341,0.210998064528027,3.10142335502381,0.282706142867882,0,0.995261931078505,0.884575645033392,0,0,0,0,0.606610196826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| ||
|short_description=p5@GCNT2 | |||
}} | }} |
Latest revision as of 13:33, 19 September 2015
Short description: | p5@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GCNT2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000379597, uc003mzc.3_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q8N0V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 5.03e-28 | 61 |
monopoietic cell | 2.03e-26 | 59 |
monocyte | 2.03e-26 | 59 |
monoblast | 2.03e-26 | 59 |
promonocyte | 2.03e-26 | 59 |
granulocyte monocyte progenitor cell | 3.44e-24 | 67 |
myeloid lineage restricted progenitor cell | 3.25e-23 | 66 |
defensive cell | 7.94e-22 | 48 |
phagocyte | 7.94e-22 | 48 |
nongranular leukocyte | 2.37e-19 | 115 |
myeloid leukocyte | 3.86e-19 | 72 |
leukocyte | 7.05e-19 | 136 |
myeloid cell | 9.99e-19 | 108 |
common myeloid progenitor | 9.99e-19 | 108 |
hematopoietic stem cell | 5.89e-17 | 168 |
hematopoietic lineage restricted progenitor cell | 6.86e-17 | 120 |
classical monocyte | 2.36e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-16 | 42 |
hematopoietic oligopotent progenitor cell | 1.94e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.94e-15 | 161 |
hematopoietic cell | 4.74e-15 | 177 |
conventional dendritic cell | 7.03e-10 | 8 |
dendritic cell | 8.30e-10 | 10 |
macrophage | 7.03e-08 | 6 |
melanocyte | 9.24e-07 | 10 |
melanoblast | 9.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.67e-23 | 108 |
hematopoietic system | 4.56e-21 | 98 |
blood island | 4.56e-21 | 98 |
immune system | 9.66e-21 | 93 |
bone marrow | 1.29e-20 | 76 |
bone element | 4.68e-18 | 82 |
skeletal element | 3.27e-15 | 90 |
skeletal system | 2.35e-12 | 100 |