FFCP PHASE1:Hg19::chr3:112357203..112357236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-259bp_to_ENST00000461431_5end | |association_with_transcript=-259bp_to_ENST00000461431_5end | ||
|cluster_id=chr3:112357203..112357236,- | |||
|coexpression_cluster_id=C1078 | |coexpression_cluster_id=C1078 | ||
|description=CAGE_peak_8_at_CCDC80_5end | |description=CAGE_peak_8_at_CCDC80_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.17e-23!180;CL:0000680!7.97e-15!57;CL:0000056!7.97e-15!57;CL:0000355!7.97e-15!57;CL:0000187!1.02e-13!54;CL:0000057!4.65e-13!75;CL:0000183!6.01e-12!59;CL:0000393!1.34e-10!60;CL:0000211!1.34e-10!60;CL:0000192!1.53e-10!42;CL:0000514!1.53e-10!42;CL:0002620!1.31e-08!23;CL:0000359!1.75e-08!32 | |ontology_enrichment_celltype=CL:0000055!4.17e-23!180;CL:0000680!7.97e-15!57;CL:0000056!7.97e-15!57;CL:0000355!7.97e-15!57;CL:0000187!1.02e-13!54;CL:0000057!4.65e-13!75;CL:0000183!6.01e-12!59;CL:0000393!1.34e-10!60;CL:0000211!1.34e-10!60;CL:0000192!1.53e-10!42;CL:0000514!1.53e-10!42;CL:0002620!1.31e-08!23;CL:0000359!1.75e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.35e-08;55!CL:0000187;4.78e-08;55!CL:0000359;6.05e-08;32!CL:0000192;8.78e-08;43!CL:0002620;1.20e-07;23!CL:0002334;1.39e-07;12!CL:0000723;4.85e-07;61!CL:0000048;7.54e-07;58 | |ontology_enrichment_celltype_v019=CL:0000134;4.35e-08;55!CL:0000187;4.78e-08;55!CL:0000359;6.05e-08;32!CL:0000192;8.78e-08;43!CL:0002620;1.20e-07;23!CL:0002334;1.39e-07;12!CL:0000723;4.85e-07;61!CL:0000048;7.54e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.98e-15,58;CL:0000056,1.98e-15,58;CL:0000355,1.98e-15,58;CL:0000187,4.09e-14,55;CL:0000057,1.40e-12,76;CL:0000393,3.18e-11,61;CL:0000211,3.18e-11,61;CL:0000192,8.88e-11,43;CL:0000514,8.88e-11,43;CL:0000359,4.41e-08,32;CL:0002334,1.03e-07,12;CL:0002620,1.48e-07,23;CL:0000222,5.82e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000355;4.49e-08;58!CL:0000514;8.78e-08;43 | |ontology_enrichment_development_v019=CL:0000355;4.49e-08;58!CL:0000514;8.78e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.63e-15!63;UBERON:0001015!7.63e-15!63;UBERON:0000383!7.63e-15!63;UBERON:0004290!1.10e-14!70;UBERON:0001134!1.98e-14!61;UBERON:0002036!1.98e-14!61;UBERON:0003082!1.98e-14!61;UBERON:0000914!2.08e-14!83;UBERON:0002329!2.08e-14!83;UBERON:0003077!2.08e-14!83;UBERON:0003059!2.08e-14!83;UBERON:0007282!2.08e-14!83;UBERON:0009618!2.08e-14!83;UBERON:0007285!2.08e-14!83;UBERON:0000486!9.47e-13!82;UBERON:0000475!8.06e-12!365;UBERON:0004872!7.84e-10!84;UBERON:0000948!4.31e-09!24;UBERON:0005498!4.31e-09!24;UBERON:0004140!4.31e-09!24;UBERON:0009881!4.31e-09!24;UBERON:0004141!4.31e-09!24;UBERON:0003084!4.31e-09!24;UBERON:0007005!4.31e-09!24;UBERON:0004139!4.31e-09!24;UBERON:0004291!4.31e-09!24;UBERON:0007100!4.50e-09!27;UBERON:0000119!1.02e-08!312;UBERON:0000468!1.25e-08!659;UBERON:0000483!1.99e-08!309;UBERON:0000481!7.33e-08!347;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0005256!1.58e-07!143;UBERON:0004923!1.96e-07!57;UBERON:0001013!9.48e-07!14 | |ontology_enrichment_uberon=UBERON:0002385!7.63e-15!63;UBERON:0001015!7.63e-15!63;UBERON:0000383!7.63e-15!63;UBERON:0004290!1.10e-14!70;UBERON:0001134!1.98e-14!61;UBERON:0002036!1.98e-14!61;UBERON:0003082!1.98e-14!61;UBERON:0000914!2.08e-14!83;UBERON:0002329!2.08e-14!83;UBERON:0003077!2.08e-14!83;UBERON:0003059!2.08e-14!83;UBERON:0007282!2.08e-14!83;UBERON:0009618!2.08e-14!83;UBERON:0007285!2.08e-14!83;UBERON:0000486!9.47e-13!82;UBERON:0000475!8.06e-12!365;UBERON:0004872!7.84e-10!84;UBERON:0000948!4.31e-09!24;UBERON:0005498!4.31e-09!24;UBERON:0004140!4.31e-09!24;UBERON:0009881!4.31e-09!24;UBERON:0004141!4.31e-09!24;UBERON:0003084!4.31e-09!24;UBERON:0007005!4.31e-09!24;UBERON:0004139!4.31e-09!24;UBERON:0004291!4.31e-09!24;UBERON:0007100!4.50e-09!27;UBERON:0000119!1.02e-08!312;UBERON:0000468!1.25e-08!659;UBERON:0000483!1.99e-08!309;UBERON:0000481!7.33e-08!347;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0005256!1.58e-07!143;UBERON:0004923!1.96e-07!57;UBERON:0001013!9.48e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.38e-08;14!UBERON:0000948;3.03e-08;22!UBERON:0007100;7.12e-08;25!UBERON:0002385;3.70e-07;31!UBERON:0001015;3.70e-07;31!UBERON:0000383;3.70e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001013;2.38e-08;14!UBERON:0000948;3.03e-08;22!UBERON:0007100;7.12e-08;25!UBERON:0002385;3.70e-07;31!UBERON:0001015;3.70e-07;31!UBERON:0000383;3.70e-07;31 | ||
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| ||
|short_description=p8@CCDC80 | |short_description=p8@CCDC80 | ||
}} | }} |
Latest revision as of 14:10, 19 September 2015
Short description: | p8@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CCDC80_5end |
Coexpression cluster: | C1078_Cardiac_Preadipocyte_Fibroblast_Chondrocyte_Synoviocyte_Ewing_Smooth |
Association with transcript: | -259bp_to_ENST00000461431_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.98e-15 | 58 |
myoblast | 1.98e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.98e-15 | 58 |
muscle cell | 4.09e-14 | 55 |
fibroblast | 1.40e-12 | 76 |
electrically responsive cell | 3.18e-11 | 61 |
electrically active cell | 3.18e-11 | 61 |
smooth muscle cell | 8.88e-11 | 43 |
smooth muscle myoblast | 8.88e-11 | 43 |
vascular associated smooth muscle cell | 4.41e-08 | 32 |
preadipocyte | 1.03e-07 | 12 |
skin fibroblast | 1.48e-07 | 23 |
mesodermal cell | 5.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 4.31e-15 | 64 |
musculature | 4.31e-15 | 64 |
musculature of body | 4.31e-15 | 64 |
skeletal muscle tissue | 4.69e-15 | 62 |
striated muscle tissue | 4.69e-15 | 62 |
myotome | 4.69e-15 | 62 |
dense mesenchyme tissue | 6.53e-14 | 73 |
somite | 8.47e-14 | 71 |
presomitic mesoderm | 8.47e-14 | 71 |
presumptive segmental plate | 8.47e-14 | 71 |
dermomyotome | 8.47e-14 | 71 |
trunk paraxial mesoderm | 8.47e-14 | 71 |
paraxial mesoderm | 2.34e-13 | 72 |
presumptive paraxial mesoderm | 2.34e-13 | 72 |
multilaminar epithelium | 1.16e-11 | 83 |
epithelial vesicle | 5.35e-11 | 78 |
heart | 3.10e-09 | 24 |
primitive heart tube | 3.10e-09 | 24 |
primary heart field | 3.10e-09 | 24 |
anterior lateral plate mesoderm | 3.10e-09 | 24 |
heart tube | 3.10e-09 | 24 |
heart primordium | 3.10e-09 | 24 |
cardiac mesoderm | 3.10e-09 | 24 |
cardiogenic plate | 3.10e-09 | 24 |
heart rudiment | 3.10e-09 | 24 |
primary circulatory organ | 7.37e-09 | 27 |
adipose tissue | 2.76e-08 | 14 |
splanchnic layer of lateral plate mesoderm | 4.91e-08 | 83 |
trunk mesenchyme | 1.53e-07 | 122 |
integument | 1.73e-07 | 46 |
integumental system | 1.73e-07 | 46 |
mesenchyme | 7.14e-07 | 160 |
entire embryonic mesenchyme | 7.14e-07 | 160 |
blood vessel layer | 8.37e-07 | 7 |