FFCP PHASE1:Hg19::chr22:28197384..28197395,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:28197384..28197395,-
|short_description=p5@MN1
|description=CAGE_peak_5_at_MN1_5end
|association_with_transcript=90bp_to_ENST00000302326,NM_002430,uc003ad...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4330 | |EntrezGene=4330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7180 | |HGNC=7180 | ||
|TSSclassifier=strong | |||
|UniProt=Q10571 | |UniProt=Q10571 | ||
|association_with_transcript=90bp_to_ENST00000302326,NM_002430,uc003adj.2_5end | |||
|cluster_id=chr22:28197384..28197395,- | |||
|description=CAGE_peak_5_at_MN1_5end | |||
|id=chr22:28197384..28197395,- | |||
|ontology_enrichment_celltype=CL:0000860!5.39e-11!45;CL:0002057!1.83e-10!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-18;33!CL:0002057;3.72e-18;33!CL:0000473;1.97e-12;39!CL:0000234;1.97e-12;39!CL:0000576;1.03e-11;48!CL:0000767;8.51e-08;3!CL:0000766;6.62e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.72e-22,42;CL:0002057,4.72e-22,42;CL:0000473,1.48e-18,48;CL:0000234,1.48e-18,48;CL:0000766,6.44e-14,72;CL:0002194,1.08e-13,59;CL:0000576,1.08e-13,59;CL:0000040,1.08e-13,59;CL:0000559,1.08e-13,59;CL:0002009,4.52e-13,61;CL:0000839,1.11e-11,66;CL:0000557,1.98e-11,67;CL:0000767,1.25e-07,3;CL:0000763,2.46e-07,108;CL:0000049,2.46e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.86e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.82e-11!123;UBERON:0000062!9.77e-11!511;UBERON:0000924!2.16e-10!173;UBERON:0006601!2.16e-10!173;UBERON:0004121!2.94e-10!169;UBERON:0000468!3.23e-10!659;UBERON:0005743!3.25e-10!86;UBERON:0001017!5.15e-10!82;UBERON:0000153!1.02e-09!129;UBERON:0007811!1.02e-09!129;UBERON:0002616!2.39e-09!59;UBERON:0000955!8.41e-09!69;UBERON:0006238!8.41e-09!69;UBERON:0000467!1.04e-08!625;UBERON:0002780!1.12e-08!41;UBERON:0001890!1.12e-08!41;UBERON:0006240!1.12e-08!41;UBERON:0000480!1.42e-08!626;UBERON:0000073!1.50e-08!94;UBERON:0001016!1.50e-08!94;UBERON:0002346!2.64e-08!90;UBERON:0003075!3.07e-08!86;UBERON:0007284!3.07e-08!86;UBERON:0003080!3.27e-08!42;UBERON:0001049!5.24e-08!57;UBERON:0005068!5.24e-08!57;UBERON:0006241!5.24e-08!57;UBERON:0007135!5.24e-08!57;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0000922!1.47e-07!612;UBERON:0000923!1.66e-07!604;UBERON:0005291!1.66e-07!604;UBERON:0006598!1.66e-07!604;UBERON:0002532!1.66e-07!604;UBERON:0002020!2.30e-07!34;UBERON:0003528!2.30e-07!34;UBERON:0001893!2.92e-07!34;UBERON:0001869!3.96e-07!32;UBERON:0002791!5.79e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.60e-11;4!UBERON:0002435;1.60e-11;4!UBERON:0000204;1.60e-11;4!UBERON:0009663;1.53e-09;7!UBERON:0005383;4.07e-09;3!UBERON:0005382;4.07e-09;3!UBERON:0002420;2.57e-07;9!UBERON:0000125;2.57e-07;9!UBERON:0007245;2.57e-07;9!UBERON:0002308;2.57e-07;9!UBERON:0010009;2.57e-07;9!UBERON:0010011;2.57e-07;9!UBERON:0000454;2.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.85e-11,4;UBERON:0002435,1.85e-11,4;UBERON:0000204,1.85e-11,4;UBERON:0010082,1.85e-11,4;UBERON:0001474,1.13e-10,82;UBERON:0002371,1.15e-10,76;UBERON:0009663,1.24e-09,7;UBERON:0004765,3.20e-09,90;UBERON:0005383,4.35e-09,3;UBERON:0005382,4.35e-09,3;UBERON:0001434,1.36e-08,100;UBERON:0002405,9.46e-08,93;UBERON:0002420,2.19e-07,9;UBERON:0000125,2.19e-07,9;UBERON:0007245,2.19e-07,9;UBERON:0002308,2.19e-07,9;UBERON:0010009,2.19e-07,9;UBERON:0010011,2.19e-07,9;UBERON:0000454,2.19e-07,9;UBERON:0001017,2.48e-07,81;UBERON:0002390,4.27e-07,98;UBERON:0003061,4.27e-07,98;UBERON:0001016,5.49e-07,89 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.704772020479856,0,0,0.872338524100369,0,0,0,0,0,1.09220686065086,1.84636884759917,0.247532705920093,0.662794751455832,0.672325146451775,0,0,0.975865597581014,2.09305798730539,3.26401105990805,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,1.57345710739562,1.15148819429164,1.23852898652861,0.919421224478927,0,0,0,0,0.293600439334847,2.76997704265939,3.40925560699241,2.60413044859022,0,0,0,1.16318591023652,0,0.242584061187816,3.25400651667958,0,0.619412741790207,3.45230870786581,0.512321413058201,0.709446689665756,1.72372840368309,2.5819387343353,0,2.44715041405386,1.09162460023138,0.674170453335254,1.83650335422542,1.60464513538047,1.91801137739712,1.31940520074686,0.199463657621632,0.852449501065388,3.19230162491442,3.40431134814684,2.4912889959823,1.50749199154046,0,1.3031330682307,2.42159801053347,2.94622108790052,0.632924774881769,0.211255286311942,0,0,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,0,0,0.434539556882471,0,0.486634870302636,0,0.886917589850256,0.175669571386252,0.130979075497713,1.82147644146271,0.370784442784429,0,0,0,0.476981248610684,0,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.529636723252875,0,0,1.12135520028461,0,4.9333509683432,0.311211035399766,0,0.163461903113459,0.454072282934794,1.72852777344,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0.723280468230358,0,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0,1.31693286264251,0,0.45071417671979,0.226864366320042,0.358779271377724,0.427114777637135,0.423863802319124,0.900273288253207,0.309157587715317,1.03056216018252,0.18611685633159,2.36286865137773,1.36411807225678,0.252433774244115,0.552299391853796,0.969876340912871,0,0.403008392910561,0,1.35282597214308,0,0.860413786167011,0,0.132529768321485,0.232387885739037,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0,0.769494313892781,0,1.40241773803446,1.6462960453256,0,0,0,0,0,0.122988438543114,0,0.658501712451753,0,0.201057944823262,0.555530670951178,0,0,0,0,1.6437217193015,0,0,0,0.790204397959275,0,0,0,0,0,0.671928512795438,0.141775097242386,0.0895585227028483,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,0.718874566474748,1.14861935834114,0,0.579125226670317,0,0,0,0.197030760201927,0,0,0,1.30139853857622,3.09315525111078,3.51784157202132,1.91381625495949,0,0,0,0,0,0,0.415941723061614,1.42743191037729,1.73472656537328,0.468565659970853,0.300946099727719,0,0,0,0.553107505625109,0.0868836144680828,1.37060810223918,1.37257369524342,0.82707210449155,0.862856803274467,0.213455115606889,0.303127571446259,8.32177197552485,1.81434175997808,0.744323423456331,1.07423381301644,0.841980283299221,0.896974044789907,1.02341449813341,1.60853921143608,0,0,0.177561725313127,0,0,0,0,0.802025881213139,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0,0.712256285173899,0,1.53752053892085,0.127612712494584,0.6069466851333,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.9266210955196,0.143124886741991,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.445234820091624,0,0.63337622438398,0,0,0,0.102268682502155,0,0.622079175323615,0.0898683511473268,0.358042349351218,0,0,0,3.33410970433911,0.969332746095218,0.556608588971108,1.99613798001194,0,0.437299999980979,0,0,0,0.236387681767936,0,0,0,2.65722415744152,2.05013945663194,0,0,0,0.658156191461918,0.10893846351899,0.557694977114413,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0,0,0,0.91821828489147,1.20054501294127,0.300646838828985,0,0,0.661983911750998,0.627865836814451,0,0,0,0,0.685946781900644,0.0870592065804026,0.34945333648406,0,0.19351266257817,0.365446585430928,0.410577285266046,0.193978032976839,0,0,0,0,0.253243183823515,0.19555138273480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| ||
|short_description=p5@MN1 | |||
}} | }} |
Latest revision as of 14:13, 19 September 2015
Short description: | p5@MN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_ENST00000302326, NM_002430, uc003adj.2_5end |
EntrezGene: | MN1 |
HGNC: | 7180 |
UniProt: | Q10571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.72e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.72e-22 | 42 |
defensive cell | 1.48e-18 | 48 |
phagocyte | 1.48e-18 | 48 |
myeloid leukocyte | 6.44e-14 | 72 |
monopoietic cell | 1.08e-13 | 59 |
monocyte | 1.08e-13 | 59 |
monoblast | 1.08e-13 | 59 |
promonocyte | 1.08e-13 | 59 |
macrophage dendritic cell progenitor | 4.52e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-11 | 66 |
granulocyte monocyte progenitor cell | 1.98e-11 | 67 |
basophil | 1.25e-07 | 3 |
myeloid cell | 2.46e-07 | 108 |
common myeloid progenitor | 2.46e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.85e-11 | 4 |
striatum | 1.85e-11 | 4 |
ventral part of telencephalon | 1.85e-11 | 4 |
future corpus striatum | 1.85e-11 | 4 |
bone element | 1.13e-10 | 82 |
bone marrow | 1.15e-10 | 76 |
telencephalic nucleus | 1.24e-09 | 7 |
skeletal element | 3.20e-09 | 90 |
caudate-putamen | 4.35e-09 | 3 |
dorsal striatum | 4.35e-09 | 3 |
skeletal system | 1.36e-08 | 100 |
immune system | 9.46e-08 | 93 |
basal ganglion | 2.19e-07 | 9 |
neural nucleus | 2.19e-07 | 9 |
nuclear complex of neuraxis | 2.19e-07 | 9 |
nucleus of brain | 2.19e-07 | 9 |
aggregate regional part of brain | 2.19e-07 | 9 |
collection of basal ganglia | 2.19e-07 | 9 |
cerebral subcortex | 2.19e-07 | 9 |
central nervous system | 2.48e-07 | 81 |
hematopoietic system | 4.27e-07 | 98 |
blood island | 4.27e-07 | 98 |
nervous system | 5.49e-07 | 89 |