FFCP PHASE1:Hg19::chr11:6624879..6624902,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:6624879..6624902,- to FFCP PHASE1:Hg19::chr11:6624879..6624902,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23378 | |EntrezGene=23378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29030 | |HGNC=29030 | ||
|TSSclassifier=strong | |||
|UniProt=O43159 | |UniProt=O43159 | ||
|association_with_transcript=0bp_to_NM_015324_5end | |||
|cluster_id=chr11:6624879..6624902,- | |||
|description=CAGE_peak_2_at_RRP8_5end | |||
|id=chr11:6624879..6624902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.11e-23!115;UBERON:0001049!5.02e-16!57;UBERON:0005068!5.02e-16!57;UBERON:0006241!5.02e-16!57;UBERON:0007135!5.02e-16!57;UBERON:0003075!1.41e-14!86;UBERON:0007284!1.41e-14!86;UBERON:0002346!2.00e-14!90;UBERON:0002780!2.13e-12!41;UBERON:0001890!2.13e-12!41;UBERON:0006240!2.13e-12!41;UBERON:0002616!2.26e-12!59;UBERON:0003080!3.51e-12!42;UBERON:0000955!8.00e-12!69;UBERON:0006238!8.00e-12!69;UBERON:0000073!4.80e-11!94;UBERON:0001016!4.80e-11!94;UBERON:0001893!5.25e-11!34;UBERON:0002020!5.44e-11!34;UBERON:0003528!5.44e-11!34;UBERON:0005743!7.19e-11!86;UBERON:0002791!1.00e-10!33;UBERON:0001017!2.74e-10!82;UBERON:0001869!6.63e-10!32;UBERON:0003056!1.59e-09!61;UBERON:0000956!1.90e-07!25;UBERON:0000203!1.90e-07!25;UBERON:0002619!2.94e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.24e-09;34!UBERON:0002020;3.24e-09;34!UBERON:0001893;3.73e-09;34!UBERON:0002791;5.33e-09;32!UBERON:0001869;9.09e-09;32!UBERON:0002780;1.11e-08;41!UBERON:0001890;1.11e-08;41!UBERON:0000073;2.44e-08;53!UBERON:0002616;2.44e-08;53!UBERON:0000956;3.07e-07;25!UBERON:0000203;3.07e-07;25!UBERON:0002619;5.74e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-23,114;UBERON:0001049,2.70e-16,56;UBERON:0005068,2.70e-16,56;UBERON:0006241,2.70e-16,56;UBERON:0007135,2.70e-16,56;UBERON:0003075,6.78e-15,82;UBERON:0007284,6.78e-15,82;UBERON:0000073,8.71e-15,53;UBERON:0002616,8.71e-15,53;UBERON:0002346,1.03e-14,86;UBERON:0002780,2.11e-12,41;UBERON:0001890,2.11e-12,41;UBERON:0003080,2.11e-12,41;UBERON:0006240,2.11e-12,41;UBERON:0000955,5.53e-12,68;UBERON:0006238,5.53e-12,68;UBERON:0001893,5.20e-11,34;UBERON:0003528,5.39e-11,34;UBERON:0002020,5.39e-11,34;UBERON:0010371,8.89e-11,104;UBERON:0001016,1.34e-10,89;UBERON:0001017,1.94e-10,81;UBERON:0002791,3.65e-10,32;UBERON:0003056,3.71e-10,61;UBERON:0001869,6.58e-10,32;UBERON:0010314,1.14e-09,132;UBERON:0000956,1.89e-07,25;UBERON:0000203,1.89e-07,25;UBERON:0002619,2.92e-07,22;UBERON:0000479,9.41e-07,773 | |||
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| ||
|short_description=p2@RRP8 | |||
}} | }} |
Latest revision as of 14:31, 19 September 2015
Short description: | p2@RRP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RRP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015324_5end |
EntrezGene: | RRP8 |
HGNC: | 29030 |
UniProt: | O43159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-23 | 114 |
neural tube | 2.70e-16 | 56 |
neural rod | 2.70e-16 | 56 |
future spinal cord | 2.70e-16 | 56 |
neural keel | 2.70e-16 | 56 |
neural plate | 6.78e-15 | 82 |
presumptive neural plate | 6.78e-15 | 82 |
regional part of nervous system | 8.71e-15 | 53 |
regional part of brain | 8.71e-15 | 53 |
neurectoderm | 1.03e-14 | 86 |
regional part of forebrain | 2.11e-12 | 41 |
forebrain | 2.11e-12 | 41 |
anterior neural tube | 2.11e-12 | 41 |
future forebrain | 2.11e-12 | 41 |
brain | 5.53e-12 | 68 |
future brain | 5.53e-12 | 68 |
telencephalon | 5.20e-11 | 34 |
brain grey matter | 5.39e-11 | 34 |
gray matter | 5.39e-11 | 34 |
ecto-epithelium | 8.89e-11 | 104 |
nervous system | 1.34e-10 | 89 |
central nervous system | 1.94e-10 | 81 |
regional part of telencephalon | 3.65e-10 | 32 |
pre-chordal neural plate | 3.71e-10 | 61 |
cerebral hemisphere | 6.58e-10 | 32 |
structure with developmental contribution from neural crest | 1.14e-09 | 132 |
cerebral cortex | 1.89e-07 | 25 |
pallium | 1.89e-07 | 25 |
regional part of cerebral cortex | 2.92e-07 | 22 |
tissue | 9.41e-07 | 773 |