FFCP PHASE1:Hg19::chr18:43405525..43405545,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284266 | |EntrezGene=284266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27596 | |HGNC=27596 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMC9 | |UniProt=Q6ZMC9 | ||
|association_with_transcript=0bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | |association_with_transcript=0bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | ||
|cluster_id=chr18:43405525..43405545,+ | |||
|coexpression_cluster_id=C3721 | |coexpression_cluster_id=C3721 | ||
|description=CAGE_peak_3_at_SIGLEC15_5end | |description=CAGE_peak_3_at_SIGLEC15_5end | ||
|id=chr18:43405525..43405545,+ | |id=chr18:43405525..43405545,+ | ||
|ontology_enrichment_celltype=CL:1000507;2.62e-35;10!CL:1000494;2.62e-35;10!CL:1000449;1.16e-27;15!CL:1000497;4.05e-24;17!CL:0002518;4.05e-24;17!CL:0000235;6.68e-23;6!CL:0002681;1.49e-18;12!CL:0002584;1.49e-18;12!CL:0000239;4.75e-11;3!CL:1000615;4.75e-11;3!CL:0002306;4.75e-11;3!CL:0000473;1.71e-09;39!CL:0000234;1.71e-09;39!CL:0000650;8.68e-09;2!CL:1000500;8.68e-09;2!CL:1000618;8.68e-09;2!CL:1001318;8.68e-09;2!CL:0002173;8.68e-09;2!CL:0002593;9.72e-08;2 | |ontology_enrichment_celltype=CL:0002371!1.78e-12!591;CL:0000548!3.41e-11!679;CL:0000004!3.41e-11!679;CL:0000255!3.41e-11!679;CL:0000144!3.64e-11!625;CL:0000055!5.49e-11!180;CL:0000012!6.49e-11!682;CL:0000048!1.30e-10!430;CL:0000723!2.35e-10!436;CL:1000507!3.62e-10!12;CL:1000494!3.62e-10!12;CL:0002194!6.33e-10!63;CL:0000576!6.33e-10!63;CL:0000040!6.33e-10!63;CL:0000559!6.33e-10!63;CL:0000034!6.79e-10!444;CL:0002009!2.51e-09!65;CL:0000680!1.48e-08!57;CL:0000056!1.48e-08!57;CL:0000355!1.48e-08!57;CL:1000449!2.02e-08!16;CL:1000497!3.06e-08!18;CL:0002518!3.06e-08!18;CL:0000839!5.29e-08!70;CL:0000557!9.17e-08!71;CL:0000359!1.06e-07!32;CL:0000183!1.55e-07!59;CL:0000003!1.89e-07!722;CL:0000766!2.79e-07!76;CL:0000187!4.22e-07!54;CL:0000222!4.86e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;2.62e-35;10!CL:1000494;2.62e-35;10!CL:1000449;1.16e-27;15!CL:1000497;4.05e-24;17!CL:0002518;4.05e-24;17!CL:0000235;6.68e-23;6!CL:0002681;1.49e-18;12!CL:0002584;1.49e-18;12!CL:0000239;4.75e-11;3!CL:1000615;4.75e-11;3!CL:0002306;4.75e-11;3!CL:0000473;1.71e-09;39!CL:0000234;1.71e-09;39!CL:0000650;8.68e-09;2!CL:1000500;8.68e-09;2!CL:1000618;8.68e-09;2!CL:1001318;8.68e-09;2!CL:0002173;8.68e-09;2!CL:0002593;9.72e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.54e-35,10;CL:1000494,1.54e-35,10;CL:1000449,7.92e-28,15;CL:1000497,2.90e-24,17;CL:0002518,2.90e-24,17;CL:0000235,8.11e-23,6;CL:0002681,1.28e-18,12;CL:0002584,1.28e-18,12;CL:0002194,1.40e-15,59;CL:0000576,1.40e-15,59;CL:0000040,1.40e-15,59;CL:0000559,1.40e-15,59;CL:0002009,6.19e-15,61;CL:0000839,1.73e-13,66;CL:0000557,3.17e-13,67;CL:0000766,5.10e-12,72;CL:0000239,3.60e-11,3;CL:1000615,3.60e-11,3;CL:0002306,3.60e-11,3;CL:0000650,9.93e-09,2;CL:1000500,9.93e-09,2;CL:1000618,9.93e-09,2;CL:1001318,9.93e-09,2;CL:0002173,9.93e-09,2;CL:0000473,1.68e-08,48;CL:0000234,1.68e-08,48;CL:0002593,1.95e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.98e-07;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004211;2.62e-35;10!UBERON:0009773;2.62e-35;10!UBERON:0001231;2.62e-35;10!UBERON:0004810;2.62e-35;10!UBERON:0006555;1.16e-27;15!UBERON:0004819;1.16e-27;15!UBERON:0001285;1.16e-27;15!UBERON:0007684;1.16e-27;15!UBERON:0001225;1.49e-18;12!UBERON:0008987;1.49e-18;12!UBERON:0000353;3.13e-18;15!UBERON:0002113;2.25e-16;24!UBERON:0011143;2.25e-16;24!UBERON:0006554;4.15e-15;30!UBERON:0001008;4.15e-15;30!UBERON:0001851;1.46e-14;15!UBERON:0000489;3.88e-13;29!UBERON:0006853;4.75e-11;3!UBERON:0007685;4.75e-11;3!UBERON:0004134;4.75e-11;3!UBERON:0003567;8.68e-09;2!UBERON:0003838;8.68e-09;2!UBERON:0003586;8.68e-09;2!UBERON:0005169;8.68e-09;2!UBERON:0002321;8.68e-09;2!UBERON:0005215;8.68e-09;2!UBERON:0002303;8.68e-09;2!UBERON:0002319;8.68e-09;2!UBERON:0002456;9.72e-08;2!UBERON:0002046;3.98e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.49e-13!167;UBERON:0003081!3.00e-11!216;UBERON:0009773!3.62e-10!12;UBERON:0001231!3.62e-10!12;UBERON:0004810!3.62e-10!12;UBERON:0002371!6.55e-09!80;UBERON:0005256!1.32e-08!143;UBERON:0000486!1.99e-08!82;UBERON:0004211!2.02e-08!16;UBERON:0001285!2.02e-08!16;UBERON:0007684!2.02e-08!16;UBERON:0003220!2.02e-08!16;UBERON:0004208!2.02e-08!16;UBERON:0001134!5.11e-08!61;UBERON:0002036!5.11e-08!61;UBERON:0003082!5.11e-08!61;UBERON:0004290!9.00e-08!70;UBERON:0000914!9.02e-08!83;UBERON:0002329!9.02e-08!83;UBERON:0003077!9.02e-08!83;UBERON:0003059!9.02e-08!83;UBERON:0007282!9.02e-08!83;UBERON:0009618!9.02e-08!83;UBERON:0007285!9.02e-08!83;UBERON:0006555!1.02e-07!17;UBERON:0005103!1.02e-07!17;UBERON:0000083!1.02e-07!17;UBERON:0009201!1.02e-07!17;UBERON:0004819!1.02e-07!17;UBERON:0006553!1.02e-07!17;UBERON:0003074!1.02e-07!17;UBERON:0003060!1.02e-07!17;UBERON:0001474!1.40e-07!86;UBERON:0002385!1.69e-07!63;UBERON:0001015!1.69e-07!63;UBERON:0000383!1.69e-07!63;UBERON:0004765!2.49e-07!101;UBERON:0001434!2.49e-07!101;UBERON:0003914!2.81e-07!118;UBERON:0000080!4.29e-07!18;UBERON:0002120!4.29e-07!18;UBERON:0004875!4.29e-07!18;UBERON:0005721!4.29e-07!18;UBERON:0005754!4.29e-07!18;UBERON:0007297!4.29e-07!18;UBERON:0000353!5.55e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.62e-35;10!UBERON:0009773;2.62e-35;10!UBERON:0001231;2.62e-35;10!UBERON:0004810;2.62e-35;10!UBERON:0006555;1.16e-27;15!UBERON:0004819;1.16e-27;15!UBERON:0001285;1.16e-27;15!UBERON:0007684;1.16e-27;15!UBERON:0001225;1.49e-18;12!UBERON:0008987;1.49e-18;12!UBERON:0000353;3.13e-18;15!UBERON:0002113;2.25e-16;24!UBERON:0011143;2.25e-16;24!UBERON:0006554;4.15e-15;30!UBERON:0001008;4.15e-15;30!UBERON:0001851;1.46e-14;15!UBERON:0000489;3.88e-13;29!UBERON:0006853;4.75e-11;3!UBERON:0007685;4.75e-11;3!UBERON:0004134;4.75e-11;3!UBERON:0003567;8.68e-09;2!UBERON:0003838;8.68e-09;2!UBERON:0003586;8.68e-09;2!UBERON:0005169;8.68e-09;2!UBERON:0002321;8.68e-09;2!UBERON:0005215;8.68e-09;2!UBERON:0002303;8.68e-09;2!UBERON:0002319;8.68e-09;2!UBERON:0002456;9.72e-08;2!UBERON:0002046;3.98e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.54e-35,10;UBERON:0004211,7.92e-28,15;UBERON:0009773,7.92e-28,15;UBERON:0001231,7.92e-28,15;UBERON:0001285,7.92e-28,15;UBERON:0007684,7.92e-28,15;UBERON:0004208,7.92e-28,15;UBERON:0006555,6.19e-26,16;UBERON:0004819,6.19e-26,16;UBERON:0001225,1.28e-18,12;UBERON:0008987,1.28e-18,12;UBERON:0000353,2.63e-18,15;UBERON:0002113,5.08e-15,26;UBERON:0003918,5.08e-15,26;UBERON:0011143,5.08e-15,26;UBERON:0005095,5.08e-15,26;UBERON:0007687,5.08e-15,26;UBERON:0001851,1.30e-14,15;UBERON:0000489,3.27e-12,31;UBERON:0006853,3.60e-11,3;UBERON:0007685,3.60e-11,3;UBERON:0004134,3.60e-11,3;UBERON:0002371,3.60e-11,76;UBERON:0001474,4.71e-10,82;UBERON:0004765,8.43e-09,90;UBERON:0006554,9.33e-09,47;UBERON:0003567,9.93e-09,2;UBERON:0003838,9.93e-09,2;UBERON:0003586,9.93e-09,2;UBERON:0005169,9.93e-09,2;UBERON:0002321,9.93e-09,2;UBERON:0005215,9.93e-09,2;UBERON:0002303,9.93e-09,2;UBERON:0002319,9.93e-09,2;UBERON:0001008,1.60e-08,48;UBERON:0002405,2.18e-08,93;UBERON:0002390,9.28e-08,98;UBERON:0003061,9.28e-08,98;UBERON:0003081,1.04e-07,203;UBERON:0001434,1.59e-07,100;UBERON:0002456,1.95e-07,2;UBERON:0005172,3.08e-07,54;UBERON:0005173,3.08e-07,54;UBERON:0002204,3.33e-07,167;UBERON:0002046,4.03e-07,5;UBERON:0004117,4.03e-07,5;UBERON:0007689,4.03e-07,5;UBERON:0007123,4.03e-07,5;UBERON:0003091,4.03e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,1.20538905604795,0.730310090387373,0,0.61560529038394,2.65200898617529,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0.200544447470142,0,1.56740831967947,3.88672399222775,0.77272670290256,0,0,0,0.232429036905685,1.23350366406548,0.309706370895104,0,0,0,0.689491361473237,3.87290810150296,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0,0,2.61188314765726,3.97169657283798,1.24564449799115,0,0,0,0.605399502633369,1.84138817993782,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.850813354476611,0,0.175669571386252,0,0.728590576585084,0,3.57002133020152,4.00498395788315,2.52620124985844,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.98667019366864,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0,0,0.204154171254893,0.982674538494144,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,2.46217006087397,12.8702345826581,6.39113997841531,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0.66004457238855,0.258543431515556,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,7.29742683847143,3.51579964002488,6.32501818449095,0.718874566474748,0,0,0.434343920002738,0.205476322550383,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0.771048469013278,0.710246901252508,0.246381468041427,0.519254429183621,0.581051892299796,0,0,0,0,0,0,4.06079651616671,8.54870241859004,1.56869953835371,5.84556898613043,4.01096189792928,0,0,2.59099099322567,0,8.39933956385944,3.01013864312912,1.52925763827023,2.49322802678617,1.56712328305525,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,1.23213432070436,0.532306030317022,0,0.9266210955196,0.143124886741991,0,0.632758849437452,0,0,0,0.318203247925937,0,0,0,0,1.01091240786658,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0,0,0,0.655894752046633,0.608731130888112,0.92947049429925,0.845086807596724,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0.886860307073351,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,6.01067007123692,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,4.00896322603251,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0,0,0,0.171986032471617,0,0,0,0,0,0,1.50746117111426,19.474031946893,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.705797459094515,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0.378806010550178,0.50313580350515,0,0.457680136793847,0.151230923763239,0.15543720058278,1.33069634990671,0.477890301491107,1.79921244865442,0.621051827505038,0.414706207840855,1.59505028734797,0,0,0,0.813741466409323,0.363697318405119,0,1.39210127963548,0,0,0.343395705182793,0,2.52369796457302,0,0,0,0,0,0,0.179088841081487,0,0,1.23682402162117,0,0.337884881306145,0,0.345430341731199,0.911579868532147,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,1.31017534008077,0.147856086217045,0,0,0,0,0,0,0,1.23109871051734,0,0,0,0,0,0,0.115233987555779,0.857440047187092,0,0,0,0.556157009460346,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,3.41227024230752,1.91107787795487,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,6.94429080406698,0,0,0.940634592723046,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91542842709595,0,0,0,0,0,0.143444410785353,0,0,0,1.9307228228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| ||
|short_description=p3@SIGLEC15 | |short_description=p3@SIGLEC15 | ||
}} | }} |
Latest revision as of 14:35, 19 September 2015
Short description: | p3@SIGLEC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIGLEC15_5end |
Coexpression cluster: | C3721_Macrophage_fibrous_anaplastic_Renal_serous_Monocytederived_small |
Association with transcript: | 0bp_to_ENST00000389474, NM_213602, uc002lbl.1_5end |
EntrezGene: | SIGLEC15 |
HGNC: | 27596 |
UniProt: | Q6ZMC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.54e-35 | 10 |
nephron tubule epithelial cell | 1.54e-35 | 10 |
epithelial cell of nephron | 7.92e-28 | 15 |
kidney cell | 2.90e-24 | 17 |
kidney epithelial cell | 2.90e-24 | 17 |
macrophage | 8.11e-23 | 6 |
kidney cortical cell | 1.28e-18 | 12 |
renal cortical epithelial cell | 1.28e-18 | 12 |
monopoietic cell | 1.40e-15 | 59 |
monocyte | 1.40e-15 | 59 |
monoblast | 1.40e-15 | 59 |
promonocyte | 1.40e-15 | 59 |
macrophage dendritic cell progenitor | 6.19e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.73e-13 | 66 |
granulocyte monocyte progenitor cell | 3.17e-13 | 67 |
myeloid leukocyte | 5.10e-12 | 72 |
brush border epithelial cell | 3.60e-11 | 3 |
kidney cortex tubule cell | 3.60e-11 | 3 |
epithelial cell of proximal tubule | 3.60e-11 | 3 |
mesangial cell | 9.93e-09 | 2 |
kidney interstitial cell | 9.93e-09 | 2 |
juxtaglomerular complex cell | 9.93e-09 | 2 |
renal interstitial pericyte | 9.93e-09 | 2 |
extraglomerular mesangial cell | 9.93e-09 | 2 |
defensive cell | 1.68e-08 | 48 |
phagocyte | 1.68e-08 | 48 |
smooth muscle cell of the internal thoracic artery | 1.95e-07 | 2 |