FFCP PHASE1:Hg19::chr3:112693763..112693777,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=131450 | |EntrezGene=131450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24235 | |HGNC=24235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000440122,ENST00000490004_5end | |||
|cluster_id=chr3:112693763..112693777,- | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_4_at_CD200R1_5end | |||
|id=chr3:112693763..112693777,- | |||
|ontology_enrichment_celltype=CL:0000738!1.20e-13!140;CL:0000037!2.08e-13!172;CL:0000566!2.08e-13!172;CL:0002032!5.21e-12!165;CL:0000837!5.21e-12!165;CL:0000988!6.12e-12!182;CL:0000766!8.94e-11!76;CL:0002274!4.43e-10!5;CL:0000457!4.43e-10!5;CL:0002191!4.43e-10!5;CL:0000097!4.43e-10!5;CL:0000831!4.43e-10!5;CL:0002028!4.43e-10!5;CL:0000763!5.58e-10!112;CL:0000049!5.58e-10!112;CL:0000094!2.43e-09!8;CL:0002031!3.70e-09!124;CL:0000767!3.91e-07!3;CL:0002087!4.67e-07!119;CL:0000839!6.83e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.39e-24;8!CL:0000081;2.30e-17;11!CL:0000097;1.23e-13;5!CL:0000840;3.00e-12;5!CL:0000767;2.29e-11;3!CL:0000775;4.89e-11;3!CL:0002619;1.26e-10;3!CL:0000990;2.53e-08;8!CL:0000163;8.39e-08;9!CL:0000451;6.92e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.56e-24,8;CL:0000766,3.60e-20,72;CL:0000081,2.08e-17,11;CL:0000738,3.28e-14,136;CL:0000097,1.50e-13,5;CL:0002028,1.50e-13,5;CL:0000763,1.41e-12,108;CL:0000049,1.41e-12,108;CL:0000840,3.00e-12,5;CL:0001029,3.00e-12,5;CL:0000767,2.29e-11,3;CL:0000775,4.21e-11,3;CL:0000037,7.09e-11,168;CL:0002619,1.60e-10,3;CL:0000988,3.74e-10,177;CL:0002032,4.58e-10,161;CL:0000837,4.58e-10,161;CL:0000839,2.38e-09,66;CL:0000557,3.45e-09,67;CL:0000990,2.53e-08,8;CL:0000163,9.34e-08,9;CL:0000451,6.93e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.37e-08;1!DOID:0070004;1.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.06e-08,1;DOID:0070004,2.06e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.85e-22!115;UBERON:0002390!7.83e-17!102;UBERON:0003061!7.83e-17!102;UBERON:0002193!3.13e-15!112;UBERON:0000178!1.02e-14!15;UBERON:0000179!1.02e-14!15;UBERON:0000463!1.02e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.76e-30;15!UBERON:0000179;1.76e-30;15!UBERON:0000463;1.76e-30;15!UBERON:0002390;3.13e-16;32!UBERON:0002193;2.73e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.02e-30,15;UBERON:0000179,1.02e-30,15;UBERON:0000463,1.02e-30,15;UBERON:0002390,2.28e-23,98;UBERON:0003061,2.28e-23,98;UBERON:0002193,6.67e-21,108;UBERON:0002371,1.26e-09,76;UBERON:0003081,1.63e-09,203;UBERON:0001474,8.52e-09,82;UBERON:0004765,7.34e-08,90;UBERON:0002405,1.50e-07,93;UBERON:0001434,6.69e-07,100 | |||
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| ||
|short_description=p4@CD200R1 | |||
}} | }} |
Latest revision as of 14:49, 19 September 2015
Short description: | p4@CD200R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD200R1_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | -4bp_to_ENST00000440122, ENST00000490004_5end |
EntrezGene: | CD200R1 |
HGNC: | 24235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.56e-24 | 8 |
myeloid leukocyte | 3.60e-20 | 72 |
blood cell | 2.08e-17 | 11 |
leukocyte | 3.28e-14 | 136 |
mast cell | 1.50e-13 | 5 |
basophil mast progenitor cell | 1.50e-13 | 5 |
myeloid cell | 1.41e-12 | 108 |
common myeloid progenitor | 1.41e-12 | 108 |
immature conventional dendritic cell | 3.00e-12 | 5 |
common dendritic progenitor | 3.00e-12 | 5 |
basophil | 2.29e-11 | 3 |
neutrophil | 4.21e-11 | 3 |
hematopoietic stem cell | 7.09e-11 | 168 |
adult endothelial progenitor cell | 1.60e-10 | 3 |
hematopoietic cell | 3.74e-10 | 177 |
hematopoietic oligopotent progenitor cell | 4.58e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.58e-10 | 161 |
myeloid lineage restricted progenitor cell | 2.38e-09 | 66 |
granulocyte monocyte progenitor cell | 3.45e-09 | 67 |
conventional dendritic cell | 2.53e-08 | 8 |
endocrine cell | 9.34e-08 | 9 |
dendritic cell | 6.93e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 1.02e-30 | 15 |
haemolymphatic fluid | 1.02e-30 | 15 |
organism substance | 1.02e-30 | 15 |
hematopoietic system | 2.28e-23 | 98 |
blood island | 2.28e-23 | 98 |
hemolymphoid system | 6.67e-21 | 108 |
bone marrow | 1.26e-09 | 76 |
lateral plate mesoderm | 1.63e-09 | 203 |
bone element | 8.52e-09 | 82 |
skeletal element | 7.34e-08 | 90 |
immune system | 1.50e-07 | 93 |
skeletal system | 6.69e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.06e-08 | 1 |
myeloma | 2.06e-08 | 1 |