FFCP PHASE1:Hg19::chr17:3379463..3379464,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=443 | |EntrezGene=443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=756 | |HGNC=756 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FH48 | |UniProt=Q6FH48 | ||
|association_with_transcript=9bp_to_CR541908,CU688602,DQ892079,DQ895272_5end | |association_with_transcript=9bp_to_CR541908,CU688602,DQ892079,DQ895272_5end | ||
|cluster_id=chr17:3379463..3379464,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_8_at_ASPA_5end | |description=CAGE_peak_8_at_ASPA_5end | ||
|id=chr17:3379463..3379464,+ | |id=chr17:3379463..3379464,+ | ||
|ontology_enrichment_celltype=CL:0000136!2.66e-18!15;CL:0002617!2.77e-10!2;CL:0000325!7.38e-08!39 | |ontology_enrichment_celltype=CL:0000136!2.66e-18!15;CL:0002617!2.77e-10!2;CL:0000325!7.38e-08!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.32e-35;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.22e-30,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.99e-50;1!UBERON:0003056;9.45e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.70e-31!57;UBERON:0005068!5.70e-31!57;UBERON:0006241!5.70e-31!57;UBERON:0007135!5.70e-31!57;UBERON:0002616!9.27e-30!59;UBERON:0000955!8.67e-27!69;UBERON:0006238!8.67e-27!69;UBERON:0002780!5.34e-26!41;UBERON:0001890!5.34e-26!41;UBERON:0006240!5.34e-26!41;UBERON:0003080!2.67e-25!42;UBERON:0007023!9.42e-25!115;UBERON:0001893!1.71e-24!34;UBERON:0002020!2.23e-24!34;UBERON:0003528!2.23e-24!34;UBERON:0001017!7.32e-24!82;UBERON:0005743!1.62e-22!86;UBERON:0000073!5.91e-22!94;UBERON:0001016!5.91e-22!94;UBERON:0002791!7.44e-22!33;UBERON:0003075!8.99e-21!86;UBERON:0007284!8.99e-21!86;UBERON:0002346!1.28e-19!90;UBERON:0001869!3.43e-19!32;UBERON:0002298!3.69e-19!8;UBERON:0002619!1.28e-16!22;UBERON:0003056!2.58e-16!61;UBERON:0001950!6.26e-15!20;UBERON:0000956!1.76e-14!25;UBERON:0000203!1.76e-14!25;UBERON:0000988!3.30e-14!3;UBERON:0006331!3.45e-14!3;UBERON:0000153!2.44e-13!129;UBERON:0007811!2.44e-13!129;UBERON:0000033!7.42e-13!123;UBERON:0002308!2.49e-12!9;UBERON:0000125!2.49e-12!9;UBERON:0000200!1.02e-11!6;UBERON:0004732!1.30e-11!13;UBERON:0005162!1.76e-10!2;UBERON:0000122!1.76e-10!2;UBERON:0002148!6.48e-10!2;UBERON:0009662!6.48e-10!2;UBERON:0004121!7.60e-10!169;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0004733!8.39e-09!12;UBERON:0002028!8.39e-09!12;UBERON:0007277!8.39e-09!12;UBERON:0000025!5.22e-08!194;UBERON:0003076!5.55e-07!15;UBERON:0003057!5.55e-07!15 | |ontology_enrichment_uberon=UBERON:0001049!5.70e-31!57;UBERON:0005068!5.70e-31!57;UBERON:0006241!5.70e-31!57;UBERON:0007135!5.70e-31!57;UBERON:0002616!9.27e-30!59;UBERON:0000955!8.67e-27!69;UBERON:0006238!8.67e-27!69;UBERON:0002780!5.34e-26!41;UBERON:0001890!5.34e-26!41;UBERON:0006240!5.34e-26!41;UBERON:0003080!2.67e-25!42;UBERON:0007023!9.42e-25!115;UBERON:0001893!1.71e-24!34;UBERON:0002020!2.23e-24!34;UBERON:0003528!2.23e-24!34;UBERON:0001017!7.32e-24!82;UBERON:0005743!1.62e-22!86;UBERON:0000073!5.91e-22!94;UBERON:0001016!5.91e-22!94;UBERON:0002791!7.44e-22!33;UBERON:0003075!8.99e-21!86;UBERON:0007284!8.99e-21!86;UBERON:0002346!1.28e-19!90;UBERON:0001869!3.43e-19!32;UBERON:0002298!3.69e-19!8;UBERON:0002619!1.28e-16!22;UBERON:0003056!2.58e-16!61;UBERON:0001950!6.26e-15!20;UBERON:0000956!1.76e-14!25;UBERON:0000203!1.76e-14!25;UBERON:0000988!3.30e-14!3;UBERON:0006331!3.45e-14!3;UBERON:0000153!2.44e-13!129;UBERON:0007811!2.44e-13!129;UBERON:0000033!7.42e-13!123;UBERON:0002308!2.49e-12!9;UBERON:0000125!2.49e-12!9;UBERON:0000200!1.02e-11!6;UBERON:0004732!1.30e-11!13;UBERON:0005162!1.76e-10!2;UBERON:0000122!1.76e-10!2;UBERON:0002148!6.48e-10!2;UBERON:0009662!6.48e-10!2;UBERON:0004121!7.60e-10!169;UBERON:0000924!1.71e-09!173;UBERON:0006601!1.71e-09!173;UBERON:0004733!8.39e-09!12;UBERON:0002028!8.39e-09!12;UBERON:0007277!8.39e-09!12;UBERON:0000025!5.22e-08!194;UBERON:0003076!5.55e-07!15;UBERON:0003057!5.55e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.99e-50;1!UBERON:0001785;3.99e-50;1!UBERON:0002464;3.99e-50;1!UBERON:0004904;3.99e-50;1!UBERON:0001021;3.99e-50;1!UBERON:0003714;7.14e-26;2!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.42e-50,1;UBERON:0001785,2.42e-50,1;UBERON:0002464,2.42e-50,1;UBERON:0004904,2.42e-50,1;UBERON:0001021,2.42e-50,1;UBERON:0003902,2.42e-50,1;UBERON:0005425,2.42e-50,1;UBERON:0003714,5.56e-26,2;UBERON:0005162,5.56e-26,2;UBERON:0000122,5.56e-26,2;UBERON:0001781,1.00e-13,4;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000010,7.91e-07,8 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,1.08803560673895,0.5013797880454,1.22538230705385,3.60659893780785,0,0,0.244052529803926,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.611727596791485,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.827463966895162,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,1.08803560673895,0.5013797880454,1.22538230705385,3.60659893780785,0,0,0.244052529803926,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0.207471757392654,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.611727596791485,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.827463966895162,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p8@ASPA | |short_description=p8@ASPA | ||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p8@ASPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ASPA_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 9bp_to_CR541908, CU688602, DQ892079, DQ895272_5end |
EntrezGene: | ASPA |
HGNC: | 756 |
UniProt: | Q6FH48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.22e-30 | 15 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.42e-50 | 1 |
cranial nerve | 2.42e-50 | 1 |
nerve trunk | 2.42e-50 | 1 |
nerve connecting eye with brain | 2.42e-50 | 1 |
nerve | 2.42e-50 | 1 |
retinal neural layer | 2.42e-50 | 1 |
presumptive neural retina | 2.42e-50 | 1 |
neural tissue | 5.56e-26 | 2 |
multi cell component structure | 5.56e-26 | 2 |
neuron projection bundle | 5.56e-26 | 2 |
layer of retina | 1.00e-13 | 4 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
peripheral nervous system | 7.91e-07 | 8 |