FFCP PHASE1:Hg19::chr15:89764789..89764850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6017 | |EntrezGene=6017 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10024 | |HGNC=10024 | ||
|TSSclassifier=strong | |||
|UniProt=P12271 | |UniProt=P12271 | ||
|association_with_transcript=71bp_to_ENST00000268125,NM_000326,uc002bnl.2_5end | |association_with_transcript=71bp_to_ENST00000268125,NM_000326,uc002bnl.2_5end | ||
|cluster_id=chr15:89764789..89764850,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_1_at_RLBP1_5end | |description=CAGE_peak_1_at_RLBP1_5end | ||
|id=chr15:89764789..89764850,- | |id=chr15:89764789..89764850,- | ||
|ontology_enrichment_celltype=CL:0002586!1.01e-09!3;CL:0000064!1.18e-08!3;CL:0005012!1.18e-08!3;CL:0000067!1.18e-08!3;CL:0002304!1.18e-08!3;CL:0002605!2.63e-08!3;CL:0000149!2.35e-07!4 | |ontology_enrichment_celltype=CL:0002586!1.01e-09!3;CL:0000064!1.18e-08!3;CL:0005012!1.18e-08!3;CL:0000067!1.18e-08!3;CL:0002304!1.18e-08!3;CL:0002605!2.63e-08!3;CL:0000149!2.35e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.42e-33;3!CL:0000149;7.97e-25;4!CL:0000147;2.03e-12;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.42e-33,3;CL:0000149,7.97e-25,4;CL:0000147,2.25e-12,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!5.48e-07!2 | |ontology_enrichment_disease=DOID:1909!5.48e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.30e-22;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.30e-22,2 | |||
|ontology_enrichment_uberon=UBERON:0003075!1.32e-65!86;UBERON:0007284!1.32e-65!86;UBERON:0002346!4.11e-62!90;UBERON:0005743!6.86e-59!86;UBERON:0003056!1.08e-57!61;UBERON:0001049!2.00e-57!57;UBERON:0005068!2.00e-57!57;UBERON:0006241!2.00e-57!57;UBERON:0007135!2.00e-57!57;UBERON:0000073!3.53e-52!94;UBERON:0001016!3.53e-52!94;UBERON:0002616!3.83e-52!59;UBERON:0002780!6.18e-51!41;UBERON:0001890!6.18e-51!41;UBERON:0006240!6.18e-51!41;UBERON:0001017!1.96e-50!82;UBERON:0003080!1.54e-49!42;UBERON:0000955!1.00e-47!69;UBERON:0006238!1.00e-47!69;UBERON:0001893!9.18e-43!34;UBERON:0002020!2.69e-42!34;UBERON:0003528!2.69e-42!34;UBERON:0000033!9.60e-42!123;UBERON:0002791!1.40e-40!33;UBERON:0004121!2.64e-40!169;UBERON:0000153!3.34e-39!129;UBERON:0007811!3.34e-39!129;UBERON:0000924!4.85e-39!173;UBERON:0006601!4.85e-39!173;UBERON:0001869!9.79e-39!32;UBERON:0000956!5.80e-35!25;UBERON:0000203!5.80e-35!25;UBERON:0002619!1.16e-28!22;UBERON:0007023!3.50e-28!115;UBERON:0001950!5.82e-28!20;UBERON:0001871!3.29e-15!7;UBERON:0007625!3.84e-15!11;UBERON:0000483!9.32e-15!309;UBERON:0002298!1.51e-14!8;UBERON:0000119!1.77e-14!312;UBERON:0000064!4.04e-13!219;UBERON:0000020!2.04e-12!23;UBERON:0000970!3.18e-12!20;UBERON:0000025!3.79e-12!194;UBERON:0001032!8.65e-12!24;UBERON:0004456!8.65e-12!24;UBERON:0002104!1.57e-11!21;UBERON:0000475!5.42e-11!365;UBERON:0000488!6.89e-11!4;UBERON:0000019!2.19e-10!19;UBERON:0000047!2.19e-10!19;UBERON:0004088!2.19e-10!19;UBERON:0003072!2.19e-10!19;UBERON:0003071!2.19e-10!19;UBERON:0004128!2.19e-10!19;UBERON:0000200!2.69e-10!6;UBERON:0000966!6.35e-10!5;UBERON:0005388!6.35e-10!5;UBERON:0001802!6.35e-10!5;UBERON:0001781!1.01e-09!3;UBERON:0001782!1.01e-09!3;UBERON:0005424!1.01e-09!3;UBERON:0003076!1.18e-09!15;UBERON:0003057!1.18e-09!15;UBERON:0004733!1.21e-09!12;UBERON:0002028!1.21e-09!12;UBERON:0007277!1.21e-09!12;UBERON:0000481!1.42e-09!347;UBERON:0001894!2.15e-09!7;UBERON:0006222!2.15e-09!7;UBERON:0002420!2.20e-09!9;UBERON:0007245!2.20e-09!9;UBERON:0010009!2.20e-09!9;UBERON:0010011!2.20e-09!9;UBERON:0000454!2.20e-09!9;UBERON:0001456!3.25e-09!21;UBERON:0005085!4.48e-09!29;UBERON:0000477!5.13e-09!286;UBERON:0002308!5.72e-09!9;UBERON:0000125!5.72e-09!9;UBERON:0000062!7.77e-09!511;UBERON:0004732!8.12e-09!13;UBERON:0000349!9.70e-09!5;UBERON:0001896!1.04e-08!3;UBERON:0005290!1.04e-08!3;UBERON:0010096!1.04e-08!3;UBERON:0001778!1.18e-08!3;UBERON:0001775!1.18e-08!3;UBERON:0001872!1.54e-08!5;UBERON:0004111!1.81e-08!241;UBERON:0002771!4.94e-08!3;UBERON:0000988!8.94e-08!3;UBERON:0006331!1.45e-07!3;UBERON:0002203!3.03e-07!6;UBERON:0001768!3.03e-07!6;UBERON:0000922!3.10e-07!612;UBERON:0003296!4.32e-07!4;UBERON:0010133!4.32e-07!4 | |ontology_enrichment_uberon=UBERON:0003075!1.32e-65!86;UBERON:0007284!1.32e-65!86;UBERON:0002346!4.11e-62!90;UBERON:0005743!6.86e-59!86;UBERON:0003056!1.08e-57!61;UBERON:0001049!2.00e-57!57;UBERON:0005068!2.00e-57!57;UBERON:0006241!2.00e-57!57;UBERON:0007135!2.00e-57!57;UBERON:0000073!3.53e-52!94;UBERON:0001016!3.53e-52!94;UBERON:0002616!3.83e-52!59;UBERON:0002780!6.18e-51!41;UBERON:0001890!6.18e-51!41;UBERON:0006240!6.18e-51!41;UBERON:0001017!1.96e-50!82;UBERON:0003080!1.54e-49!42;UBERON:0000955!1.00e-47!69;UBERON:0006238!1.00e-47!69;UBERON:0001893!9.18e-43!34;UBERON:0002020!2.69e-42!34;UBERON:0003528!2.69e-42!34;UBERON:0000033!9.60e-42!123;UBERON:0002791!1.40e-40!33;UBERON:0004121!2.64e-40!169;UBERON:0000153!3.34e-39!129;UBERON:0007811!3.34e-39!129;UBERON:0000924!4.85e-39!173;UBERON:0006601!4.85e-39!173;UBERON:0001869!9.79e-39!32;UBERON:0000956!5.80e-35!25;UBERON:0000203!5.80e-35!25;UBERON:0002619!1.16e-28!22;UBERON:0007023!3.50e-28!115;UBERON:0001950!5.82e-28!20;UBERON:0001871!3.29e-15!7;UBERON:0007625!3.84e-15!11;UBERON:0000483!9.32e-15!309;UBERON:0002298!1.51e-14!8;UBERON:0000119!1.77e-14!312;UBERON:0000064!4.04e-13!219;UBERON:0000020!2.04e-12!23;UBERON:0000970!3.18e-12!20;UBERON:0000025!3.79e-12!194;UBERON:0001032!8.65e-12!24;UBERON:0004456!8.65e-12!24;UBERON:0002104!1.57e-11!21;UBERON:0000475!5.42e-11!365;UBERON:0000488!6.89e-11!4;UBERON:0000019!2.19e-10!19;UBERON:0000047!2.19e-10!19;UBERON:0004088!2.19e-10!19;UBERON:0003072!2.19e-10!19;UBERON:0003071!2.19e-10!19;UBERON:0004128!2.19e-10!19;UBERON:0000200!2.69e-10!6;UBERON:0000966!6.35e-10!5;UBERON:0005388!6.35e-10!5;UBERON:0001802!6.35e-10!5;UBERON:0001781!1.01e-09!3;UBERON:0001782!1.01e-09!3;UBERON:0005424!1.01e-09!3;UBERON:0003076!1.18e-09!15;UBERON:0003057!1.18e-09!15;UBERON:0004733!1.21e-09!12;UBERON:0002028!1.21e-09!12;UBERON:0007277!1.21e-09!12;UBERON:0000481!1.42e-09!347;UBERON:0001894!2.15e-09!7;UBERON:0006222!2.15e-09!7;UBERON:0002420!2.20e-09!9;UBERON:0007245!2.20e-09!9;UBERON:0010009!2.20e-09!9;UBERON:0010011!2.20e-09!9;UBERON:0000454!2.20e-09!9;UBERON:0001456!3.25e-09!21;UBERON:0005085!4.48e-09!29;UBERON:0000477!5.13e-09!286;UBERON:0002308!5.72e-09!9;UBERON:0000125!5.72e-09!9;UBERON:0000062!7.77e-09!511;UBERON:0004732!8.12e-09!13;UBERON:0000349!9.70e-09!5;UBERON:0001896!1.04e-08!3;UBERON:0005290!1.04e-08!3;UBERON:0010096!1.04e-08!3;UBERON:0001778!1.18e-08!3;UBERON:0001775!1.18e-08!3;UBERON:0001872!1.54e-08!5;UBERON:0004111!1.81e-08!241;UBERON:0002771!4.94e-08!3;UBERON:0000988!8.94e-08!3;UBERON:0006331!1.45e-07!3;UBERON:0002203!3.03e-07!6;UBERON:0001768!3.03e-07!6;UBERON:0000922!3.10e-07!612;UBERON:0003296!4.32e-07!4;UBERON:0010133!4.32e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;9.17e-35;5!UBERON:0005388;9.17e-35;5!UBERON:0001802;9.17e-35;5!UBERON:0001781;7.42e-33;3!UBERON:0001782;7.42e-33;3!UBERON:0000970;6.40e-19;20!UBERON:0002104;5.29e-18;21!UBERON:0000020;2.08e-16;23!UBERON:0007625;9.71e-16;11!UBERON:0001032;1.04e-15;24!UBERON:0004456;1.04e-15;24!UBERON:0000019;5.27e-14;19!UBERON:0000047;5.27e-14;19!UBERON:0004088;5.27e-14;19!UBERON:0010230;5.27e-14;19!UBERON:0001456;1.16e-12;21!UBERON:0010371;1.10e-11;31!UBERON:0003296;1.55e-11;4!UBERON:0010133;1.55e-11;4!UBERON:0001894;5.84e-07;7!UBERON:0001871;8.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,7.42e-33,3;UBERON:0005424,7.42e-33,3;UBERON:0000966,4.91e-29,6;UBERON:0005388,4.91e-29,6;UBERON:0001802,4.91e-29,6;UBERON:0001781,7.97e-25,4;UBERON:0000970,5.06e-18,21;UBERON:0002104,5.06e-18,21;UBERON:0007625,9.17e-16,11;UBERON:0000020,1.00e-15,24;UBERON:0001032,1.00e-15,24;UBERON:0004456,1.00e-15,24;UBERON:0010371,4.88e-15,104;UBERON:0003075,9.50e-14,82;UBERON:0007284,9.50e-14,82;UBERON:0000019,2.57e-13,20;UBERON:0000047,2.57e-13,20;UBERON:0010312,2.57e-13,20;UBERON:0004088,2.57e-13,20;UBERON:0010230,2.57e-13,20;UBERON:0003072,2.57e-13,20;UBERON:0004128,2.57e-13,20;UBERON:0003071,2.57e-13,20;UBERON:0002346,4.81e-13,86;UBERON:0003056,1.13e-12,61;UBERON:0001456,4.25e-12,22;UBERON:0003296,1.47e-11,4;UBERON:0010133,1.47e-11,4;UBERON:0004121,2.01e-11,171;UBERON:0000924,2.01e-11,171;UBERON:0006601,2.01e-11,171;UBERON:0005085,1.51e-08,31;UBERON:0010314,5.62e-08,132;UBERON:0001017,4.23e-07,81;UBERON:0001894,5.67e-07,7;UBERON:0006222,5.67e-07,7;UBERON:0001871,7.86e-07,6 | |||
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| ||
|short_description=p1@RLBP1 | |short_description=p1@RLBP1 | ||
}} | }} |
Latest revision as of 16:46, 19 September 2015
Short description: | p1@RLBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RLBP1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 71bp_to_ENST00000268125, NM_000326, uc002bnl.2_5end |
EntrezGene: | RLBP1 |
HGNC: | 10024 |
UniProt: | P12271 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.42e-33 | 3 |
visual pigment cell | 7.97e-25 | 4 |
pigment cell | 2.25e-12 | 14 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.30e-22 | 2 |