FFCP PHASE1:Hg19::chr6:74230020..74230043,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:74230020..74230043,-
|short_description=p10@EEF1A1
|description=CAGE_peak_10_at_EEF1A1_5end
|association_with_transcript=-234bp_to_uc003phi.2_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1915 | |EntrezGene=1915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3189 | |HGNC=3189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-234bp_to_uc003phi.2_5end | |||
|cluster_id=chr6:74230020..74230043,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_EEF1A1_5end | |||
|id=chr6:74230020..74230043,- | |||
|ontology_enrichment_celltype=CL:0000012!2.14e-26!682;CL:0000548!2.63e-26!679;CL:0000004!2.63e-26!679;CL:0000255!2.63e-26!679;CL:0000144!1.25e-21!625;CL:0002057!2.34e-20!42;CL:0000860!5.66e-19!45;CL:0002371!4.61e-18!591;CL:0000003!1.03e-17!722;CL:0000766!4.86e-15!76;CL:0000557!1.11e-13!71;CL:0000063!1.28e-13!578;CL:0000034!5.85e-13!444;CL:0002009!2.90e-12!65;CL:0000723!3.46e-12!436;CL:0000839!4.06e-12!70;CL:0000048!1.13e-11!430;CL:0002194!2.95e-11!63;CL:0000576!2.95e-11!63;CL:0000040!2.95e-11!63;CL:0000559!2.95e-11!63;CL:0000763!6.04e-09!112;CL:0000049!6.04e-09!112;CL:0000222!1.01e-07!119;CL:0000738!4.12e-07!140;CL:0002321!6.60e-07!248;CL:0000220!9.24e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-36;33!CL:0002057;1.49e-36;33!CL:0000473;2.28e-24;39!CL:0000234;2.28e-24;39!CL:0000576;2.81e-19;48!CL:0000766;1.56e-15;69!CL:0000359;1.27e-08;32!CL:0000763;4.36e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-36,42;CL:0002057,1.34e-36,42;CL:0000766,1.81e-32,72;CL:0000473,1.75e-30,48;CL:0000234,1.75e-30,48;CL:0000557,8.66e-29,67;CL:0002009,6.54e-26,61;CL:0000839,6.85e-26,66;CL:0002194,1.21e-23,59;CL:0000576,1.21e-23,59;CL:0000040,1.21e-23,59;CL:0000559,1.21e-23,59;CL:0000763,4.46e-19,108;CL:0000049,4.46e-19,108;CL:0000738,2.53e-15,136;CL:0002031,1.78e-13,120;CL:0002032,1.05e-10,161;CL:0000837,1.05e-10,161;CL:0000037,1.08e-09,168;CL:0002087,1.36e-09,115;CL:0000988,1.45e-09,177;CL:0000359,4.29e-09,32;CL:0000034,2.38e-07,441;CL:0000222,5.28e-07,121;CL:0000094,8.92e-07,8;CL:0000723,8.97e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.43e-13!167;UBERON:0002371!6.82e-12!80;UBERON:0003081!1.25e-11!216;UBERON:0001474!8.15e-11!86;UBERON:0000055!1.65e-10!69;UBERON:0004765!2.28e-10!101;UBERON:0001434!2.28e-10!101;UBERON:0001637!2.71e-10!42;UBERON:0003509!2.71e-10!42;UBERON:0004572!2.71e-10!42;UBERON:0001981!4.97e-09!60;UBERON:0007500!4.97e-09!60;UBERON:0004537!4.97e-09!60;UBERON:0006965!4.97e-09!60;UBERON:0000926!6.23e-09!448;UBERON:0004120!6.23e-09!448;UBERON:0006603!6.23e-09!448;UBERON:0002193!8.38e-09!112;UBERON:0002049!4.39e-08!79;UBERON:0007798!4.39e-08!79;UBERON:0002390!4.84e-08!102;UBERON:0003061!4.84e-08!102;UBERON:0002405!1.30e-07!115;UBERON:0004573!1.30e-07!33;UBERON:0004571!1.30e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.61e-10;42!UBERON:0003509;1.61e-10;42!UBERON:0004572;1.61e-10;42!UBERON:0004573;1.57e-08;33!UBERON:0004571;1.57e-08;33!UBERON:0007500;2.61e-07;56!UBERON:0001981;2.61e-07;56!UBERON:0004537;2.61e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.52e-25,76;UBERON:0001474,3.68e-22,82;UBERON:0004765,2.62e-21,90;UBERON:0002405,2.88e-21,93;UBERON:0002204,3.24e-20,167;UBERON:0003081,1.02e-19,203;UBERON:0002390,2.76e-18,98;UBERON:0003061,2.76e-18,98;UBERON:0002193,3.40e-18,108;UBERON:0001434,8.43e-18,100;UBERON:0000926,6.07e-15,315;UBERON:0004120,6.07e-15,315;UBERON:0006603,6.07e-15,315;UBERON:0001637,1.96e-14,42;UBERON:0003509,1.96e-14,42;UBERON:0004572,1.96e-14,42;UBERON:0000055,4.11e-11,68;UBERON:0007500,5.88e-11,59;UBERON:0001981,5.88e-11,59;UBERON:0004537,5.88e-11,59;UBERON:0006965,5.88e-11,59;UBERON:0004573,1.22e-09,33;UBERON:0004571,1.22e-09,33;UBERON:0002049,1.23e-08,78;UBERON:0007798,1.23e-08,78 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,2.00146596706261,0,0.872338524100369,0,0.631719873426831,0,1.22866968250754,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0,2.41077811209591,0.730310090387373,1.95173119516203,0,0.204000691244253,0,0.572471974262113,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,4.32700704533794,3.45446458287491,3.71558695958582,0,0.30120591877825,1.10926203050036,0.154934401160603,0.284338464974843,0,6.09394949385065,3.00816671205213,3.90619567288533,0,0,0,2.32637182047304,1.51150377475524,2.66842467306598,6.74044207026485,6.16751832032739,12.3882548358041,4.89077066947656,5.89169625016932,8.51336027598907,16.2030469946211,12.2642089880927,21.6682378550947,4.70605848856512,9.00590295190891,6.74170453335254,12.549439587207,11.2325159476633,8.31138263538754,2.63881040149373,1.79517291859469,2.98357325372886,17.7027635563436,9.64554881974938,8.71951148593805,8.79370328398601,9.90817544998383,9.55630916702513,9.6863920421339,8.83866326370155,10.1267963981083,0.211255286311942,0.425208599930087,0.628975936525128,0.44931452458598,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.79504962946682,0.860234595106124,2.08284300964557,1.13061588384802,0.838998872419812,1.37559020970034,1.25396979922086,0.775250277507987,0.71153252537342,0,1.61131726843659,0.760272105718513,0.24406205754817,2.20597848207521,0,0.714397826272638,0.673588117878509,1.0135033243499,0,1.89853131913626,0.916008719652036,2.63560834872127,3.87780264148325,0,0,1.01304409331664,2.38336525463794,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0.74000264525148,0,0.67355336034844,0.163461903113459,0,0,0,2.18512053781224,2.2818872861778,0.597794722207204,0.939475989150119,0.809364721840658,0.421352420106746,0.408308342509787,0.491337269247072,0.103325781175765,0,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.125118519871964,0.831192346452549,0,0.919463387397059,0.150238058906597,1.36118619792025,0,0,0,0.600182192168805,0.103052529238439,0,0.18611685633159,0.675105328965065,0.292311015483596,0.252433774244115,0.0920498986422993,0,1.06502877754984,0.906768884048762,0.508681776931463,0.773043412653187,0.818238361772504,1.43402297694502,0.975789649036763,0.132529768321485,0.464775771478074,1.14027160516907,1.00928340350251,0.36497735907583,0,1.28648187638577,0,0.928735856063958,0.721879481669586,1.41968160047813,1.34867752062481,0.964044119533928,0.55146986366197,0.871517776369625,0.71181185733329,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,1.96565443335525,0,0.441463099414651,0,0.857839051492628,1.31700342490351,1.1240175325762,1.20634766893957,0.555530670951178,0,0,1.44331342025273,0.115930404975077,0.352226082707465,1.87676382089396,1.38895653772983,1.33177906564219,0,0,0,0.234004265139238,0.148631162288728,1.87467667973554,0.671928512795438,1.41775097242386,0.626909658919938,1.16253575405585,0,4.92663237895944,0.528290604079356,2.90259361757081,2.45003920808834,1.13618190083742,0.253991577168676,0,1.17217447210047,0,0,0.300343057843917,0,0.336393253036082,0,0.4400297149257,0.387815147273333,0,0,0,0,0.257207374262142,0,1.0656887160644,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0.502257091432126,0,0.958499421966331,0,0,1.59259437334337,0.410952645100767,0.358121926479791,0,1.57624608161542,1.50939302401662,1.79680250791648,0.254094624222463,0,0,0.167516265334349,0.637938751653163,1.49801404789436,0,0,0,0,0,0.415941723061614,1.24900292158013,0,0.35142424497814,0,0,0,0,0.368738337083406,0.347534457872331,0,0,0.206768026122887,0.647142602455851,0.74709290462411,0.909382714338778,0,0.30239029332968,0,0.61384789315225,0.280660094433074,0.512556597022804,0,1.76939313257968,0,1.69630663182921,0.710246901252508,0.574890092096664,0.519254429183621,1.27831416305955,0,1.60405176242628,0,0.803701137152247,0.728364672026868,0,0.902399225814824,0.770153371044148,0,0,0.527758144464379,0,1.02056223165909,0.863663664408557,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,1.79515087581472,0,0.325378394664303,0.103041011647722,0,0.082509499920588,1.14853107599234,0.650060246036521,0,0.290012154876366,1.23238893691716,0.767518373630648,1.10269257987624,0.322260734604821,0.145016693914229,0.681813019328807,0,0.826424576804891,0.768760269460425,0.255225424989168,0,1.39453664789186,2.51849877464512,2.0911118104818,0,1.59691809095107,0.869932992075073,2.03856641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| ||
|short_description=p10@EEF1A1 | |||
}} | }} |
Latest revision as of 18:12, 19 September 2015
Short description: | p10@EEF1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EEF1A1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -234bp_to_uc003phi.2_5end |
EntrezGene: | EEF1A1 |
HGNC: | 3189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-36 | 42 |
myeloid leukocyte | 1.81e-32 | 72 |
defensive cell | 1.75e-30 | 48 |
phagocyte | 1.75e-30 | 48 |
granulocyte monocyte progenitor cell | 8.66e-29 | 67 |
macrophage dendritic cell progenitor | 6.54e-26 | 61 |
myeloid lineage restricted progenitor cell | 6.85e-26 | 66 |
monopoietic cell | 1.21e-23 | 59 |
monocyte | 1.21e-23 | 59 |
monoblast | 1.21e-23 | 59 |
promonocyte | 1.21e-23 | 59 |
myeloid cell | 4.46e-19 | 108 |
common myeloid progenitor | 4.46e-19 | 108 |
leukocyte | 2.53e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.78e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.05e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-10 | 161 |
hematopoietic stem cell | 1.08e-09 | 168 |
nongranular leukocyte | 1.36e-09 | 115 |
hematopoietic cell | 1.45e-09 | 177 |
vascular associated smooth muscle cell | 4.29e-09 | 32 |
stem cell | 2.38e-07 | 441 |
mesodermal cell | 5.28e-07 | 121 |
granulocyte | 8.92e-07 | 8 |
somatic stem cell | 8.97e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.52e-25 | 76 |
bone element | 3.68e-22 | 82 |
skeletal element | 2.62e-21 | 90 |
immune system | 2.88e-21 | 93 |
musculoskeletal system | 3.24e-20 | 167 |
lateral plate mesoderm | 1.02e-19 | 203 |
hematopoietic system | 2.76e-18 | 98 |
blood island | 2.76e-18 | 98 |
hemolymphoid system | 3.40e-18 | 108 |
skeletal system | 8.43e-18 | 100 |
mesoderm | 6.07e-15 | 315 |
mesoderm-derived structure | 6.07e-15 | 315 |
presumptive mesoderm | 6.07e-15 | 315 |
artery | 1.96e-14 | 42 |
arterial blood vessel | 1.96e-14 | 42 |
arterial system | 1.96e-14 | 42 |
vessel | 4.11e-11 | 68 |
epithelial tube open at both ends | 5.88e-11 | 59 |
blood vessel | 5.88e-11 | 59 |
blood vasculature | 5.88e-11 | 59 |
vascular cord | 5.88e-11 | 59 |
systemic artery | 1.22e-09 | 33 |
systemic arterial system | 1.22e-09 | 33 |
vasculature | 1.23e-08 | 78 |
vascular system | 1.23e-08 | 78 |