FFCP PHASE1:Hg19::chr6:74231506..74231524,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:74231506..74231524,- to FFCP PHASE1:Hg19::chr6:74231506..74231524,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1915 | |EntrezGene=1915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3189 | |HGNC=3189 | ||
|TSSclassifier=strong | |||
|UniProt=P68104,Q5VTE0 | |UniProt=P68104,Q5VTE0 | ||
|association_with_transcript=-62bp_to_ENST00000331523_5end | |||
|cluster_id=chr6:74231506..74231524,- | |||
|description=CAGE_peak_11_at_EEF1A1_5end | |||
|id=chr6:74231506..74231524,- | |||
|ontology_enrichment_celltype=CL:0000860!1.59e-14!45;CL:0002057!4.01e-14!42;CL:0000034!1.05e-12!444;CL:0000048!5.86e-12!430;CL:0000723!1.99e-11!436;CL:0000557!1.33e-10!71;CL:0000012!1.61e-10!682;CL:0000548!2.05e-10!679;CL:0000004!2.05e-10!679;CL:0000255!2.05e-10!679;CL:0002009!3.22e-09!65;CL:0000839!6.36e-09!70;CL:0002194!7.75e-09!63;CL:0000576!7.75e-09!63;CL:0000040!7.75e-09!63;CL:0000559!7.75e-09!63;CL:0002371!2.40e-08!591;CL:0000144!3.56e-08!625;CL:0000766!7.38e-08!76;CL:0000003!8.38e-08!722;CL:0000359!4.77e-07!32;CL:0000055!4.99e-07!180;CL:0000393!5.79e-07!60;CL:0000211!5.79e-07!60;CL:0000192!7.13e-07!42;CL:0000514!7.13e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-22;33!CL:0002057;1.04e-22;33!CL:0000473;2.63e-17;39!CL:0000234;2.63e-17;39!CL:0000576;8.89e-11;48!CL:0000766;1.86e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.28e-20,42;CL:0002057,1.28e-20,42;CL:0000557,4.73e-19,67;CL:0000473,1.12e-18,48;CL:0000234,1.12e-18,48;CL:0000839,1.35e-16,66;CL:0000766,1.10e-15,72;CL:0002009,1.34e-15,61;CL:0002194,6.70e-15,59;CL:0000576,6.70e-15,59;CL:0000040,6.70e-15,59;CL:0000559,6.70e-15,59;CL:0000034,1.09e-11,441;CL:0000048,4.09e-11,427;CL:0000723,1.14e-10,433;CL:0000763,4.65e-10,108;CL:0000049,4.65e-10,108;CL:0000219,1.99e-09,386;CL:0000134,2.14e-09,354;CL:0002320,7.04e-09,361;CL:0000784,6.51e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.10e-16!167;UBERON:0004765!3.79e-12!101;UBERON:0001434!3.79e-12!101;UBERON:0002371!6.46e-12!80;UBERON:0001474!1.02e-11!86;UBERON:0000914!8.56e-09!83;UBERON:0002329!8.56e-09!83;UBERON:0003077!8.56e-09!83;UBERON:0003059!8.56e-09!83;UBERON:0007282!8.56e-09!83;UBERON:0009618!8.56e-09!83;UBERON:0007285!8.56e-09!83;UBERON:0000926!3.54e-08!448;UBERON:0004120!3.54e-08!448;UBERON:0006603!3.54e-08!448;UBERON:0001981!1.44e-07!60;UBERON:0007500!1.44e-07!60;UBERON:0004537!1.44e-07!60;UBERON:0006965!1.44e-07!60;UBERON:0004290!1.56e-07!70;UBERON:0002390!1.63e-07!102;UBERON:0003061!1.63e-07!102;UBERON:0002405!1.82e-07!115;UBERON:0001637!1.98e-07!42;UBERON:0003509!1.98e-07!42;UBERON:0004572!1.98e-07!42;UBERON:0000055!4.57e-07!69;UBERON:0000480!5.00e-07!626;UBERON:0003081!6.15e-07!216;UBERON:0000467!7.85e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-19,76;UBERON:0001474,1.03e-18,82;UBERON:0001434,9.20e-17,100;UBERON:0004765,3.65e-16,90;UBERON:0002204,2.44e-15,167;UBERON:0002405,2.48e-14,93;UBERON:0002390,3.36e-14,98;UBERON:0003061,3.36e-14,98;UBERON:0002193,5.30e-12,108;UBERON:0003081,1.28e-11,203;UBERON:0000926,1.28e-09,315;UBERON:0004120,1.28e-09,315;UBERON:0006603,1.28e-09,315;UBERON:0002384,1.23e-08,371 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.783556884599516,0.245733936501509,0,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.273748850145768,0,0.61130724598361,0.410502947249729,0.550975469195755,1.18009283054671,0,0.619264493264304,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,1.46800219667424,2.21598163412751,0.802177789880567,0.868043482863407,0,0,0,0,0.377875943688809,0.485168122375632,0.929716147622738,2.87817521615278,1.85823822537062,3.16461631554365,4.09857130446561,2.36482229888585,6.89491361473237,4.51839278508678,4.06279459783025,0,0.545812300115692,0.674170453335254,5.81559395504715,6.09765151444578,6.39337125799041,1.31940520074686,0.997318288108159,1.70489900213078,4.64334781805734,3.97169657283798,4.9825779919646,1.7587406567972,2.60741459210101,2.82345498116652,3.02699751316684,8.83866326370155,5.69632297393592,0.211255286311942,0.637812899895131,0.628975936525128,0.22465726229299,0,0,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0.289693037921647,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0.392937226493138,0,0,0.324547393654683,0,0,3.10037811596945,2.28797964312051,1.85728750664782,0.79504962946682,0,1.04142150482278,0.56530794192401,0,0,1.04497483268405,0,0.71153252537342,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0.81014194788176,0.803697554556718,0.673588117878509,0.112611480483322,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,0,0.12663051166458,1.58891016975863,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.624320153660641,2.2818872861778,1.04614076386261,0.939475989150119,0.809364721840658,0.98315564691574,1.42907919878425,0.859840221182376,0.826606249406124,0,0.247266929278557,0,0,0.841680569770331,0.125118519871964,2.21651292387346,0.438977620880838,1.5324389789951,0.300476117813194,0.226864366320042,0.179389635688862,0,0.211931901159562,0.600182192168805,1.03052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.584622030967192,0.252433774244115,0.552299391853796,0.161646056818812,0.355009592516614,0.906768884048762,0.339121184620975,1.35282597214308,0,0.286804595389004,1.09776335516636,0.662648841607426,0.580969714347592,1.0366105501537,1.51392510525377,0,3.12899064659632,1.28648187638577,1.38134921352481,0.464367928031979,0,0.236613600079688,0.674338760312407,0.241011029883482,0.220587945464788,0.871517776369625,0.237270619111097,0.808987848960987,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.462942225792648,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0,12.8092441852945,0,2.07328115540772,0.432359860250884,1.64115163454294,0.507983154337352,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.517086863031111,0,0,0,0,0,2.83698264046557,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0,0,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,0,0.718874566474748,0,0,1.30303176000821,0,0.537182889719687,0,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.368738337083406,0.955719759148911,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.804269605718038,0,0.462629081407967,0.532685175939381,1.72467027628999,1.55776328755086,1.62694529843943,0.483437798366489,0.200506470303285,0.184161977871793,1.03333003348146,1.27463817604702,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.082509499920588,1.14853107599234,0.650060246036521,0,0.48335359146061,0.154048617114644,0.460511024178389,0.689182862422653,0.214840489736547,0.145016693914229,0.767039646744908,0.890320356467374,0.495854746082934,0.384380134730212,0.255225424989168,0.2023155617111,0.464845549297286,0.31481234683064,2.0911118104818,0.308033580176089,0.532306030317022,1.73986598415015,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.636406495851874,2.35484592059769,0.539617372749944,0.274537029736055,0.353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|phase1_expression=0,0.856402095563933,0.281908808191942,0,0.446961094427288,0,0,1.26343974685366,0.783556884599516,0.245733936501509,0,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,0.602694528023977,0,0.487932798790507,0.492484232307152,0.204000691244253,0,0,0.273748850145768,0,0.61130724598361,0.410502947249729,0.550975469195755,1.18009283054671,0,0.619264493264304,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,1.46800219667424,2.21598163412751,0.802177789880567,0.868043482863407,0,0,0,0,0.377875943688809,0.485168122375632,0.929716147622738,2.87817521615278,1.85823822537062,3.16461631554365,4.09857130446561,2.36482229888585,6.89491361473237,4.51839278508678,4.06279459783025,0,0.545812300115692,0.674170453335254,5.81559395504715,6.09765151444578,6.39337125799041,1.31940520074686,0.997318288108159,1.70489900213078,4.64334781805734,3.97169657283798,4.9825779919646,1.7587406567972,2.60741459210101,2.82345498116652,3.02699751316684,8.83866326370155,5.69632297393592,0.211255286311942,0.637812899895131,0.628975936525128,0.22465726229299,0,0,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,1.0843174571537,1.00267582127178,0.289693037921647,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0.392937226493138,0,0,0.324547393654683,0,0,3.10037811596945,2.28797964312051,1.85728750664782,0.79504962946682,0,1.04142150482278,0.56530794192401,0,0,1.04497483268405,0,0.71153252537342,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0.81014194788176,0.803697554556718,0.673588117878509,0.112611480483322,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,0,0.12663051166458,1.58891016975863,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0.624320153660641,2.2818872861778,1.04614076386261,0.939475989150119,0.809364721840658,0.98315564691574,1.42907919878425,0.859840221182376,0.826606249406124,0,0.247266929278557,0,0,0.841680569770331,0.125118519871964,2.21651292387346,0.438977620880838,1.5324389789951,0.300476117813194,0.226864366320042,0.179389635688862,0,0.211931901159562,0.600182192168805,1.03052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0.584622030967192,0.252433774244115,0.552299391853796,0.161646056818812,0.355009592516614,0.906768884048762,0.339121184620975,1.35282597214308,0,0.286804595389004,1.09776335516636,0.662648841607426,0.580969714347592,1.0366105501537,1.51392510525377,0,3.12899064659632,1.28648187638577,1.38134921352481,0.464367928031979,0,0.236613600079688,0.674338760312407,0.241011029883482,0.220587945464788,0.871517776369625,0.237270619111097,0.808987848960987,0.196221465125346,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.462942225792648,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0.290633938513962,0,12.8092441852945,0,2.07328115540772,0.432359860250884,1.64115163454294,0.507983154337352,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.517086863031111,0,0,0,0,0,2.83698264046557,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0,0,0.602878754119172,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,0,0.718874566474748,0,0,1.30303176000821,0,0.537182889719687,0,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0.502548796003046,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.368738337083406,0.955719759148911,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.804269605718038,0,0.462629081407967,0.532685175939381,1.72467027628999,1.55776328755086,1.62694529843943,0.483437798366489,0.200506470303285,0.184161977871793,1.03333003348146,1.27463817604702,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.082509499920588,1.14853107599234,0.650060246036521,0,0.48335359146061,0.154048617114644,0.460511024178389,0.689182862422653,0.214840489736547,0.145016693914229,0.767039646744908,0.890320356467374,0.495854746082934,0.384380134730212,0.255225424989168,0.2023155617111,0.464845549297286,0.31481234683064,2.0911118104818,0.308033580176089,0.532306030317022,1.73986598415015,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0.636406495851874,2.35484592059769,0.539617372749944,0.274537029736055,0.353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| ||
|short_description=p11@EEF1A1 | |||
}} | }} |
Latest revision as of 18:17, 19 September 2015
Short description: | p11@EEF1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EEF1A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -62bp_to_ENST00000331523_5end |
EntrezGene: | EEF1A1 |
HGNC: | 3189 |
UniProt: | P68104Q5VTE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.28e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-20 | 42 |
granulocyte monocyte progenitor cell | 4.73e-19 | 67 |
defensive cell | 1.12e-18 | 48 |
phagocyte | 1.12e-18 | 48 |
myeloid lineage restricted progenitor cell | 1.35e-16 | 66 |
myeloid leukocyte | 1.10e-15 | 72 |
macrophage dendritic cell progenitor | 1.34e-15 | 61 |
monopoietic cell | 6.70e-15 | 59 |
monocyte | 6.70e-15 | 59 |
monoblast | 6.70e-15 | 59 |
promonocyte | 6.70e-15 | 59 |
stem cell | 1.09e-11 | 441 |
multi fate stem cell | 4.09e-11 | 427 |
somatic stem cell | 1.14e-10 | 433 |
myeloid cell | 4.65e-10 | 108 |
common myeloid progenitor | 4.65e-10 | 108 |
motile cell | 1.99e-09 | 386 |
mesenchymal cell | 2.14e-09 | 354 |
connective tissue cell | 7.04e-09 | 361 |
plasmacytoid dendritic cell | 6.51e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-19 | 76 |
bone element | 1.03e-18 | 82 |
skeletal system | 9.20e-17 | 100 |
skeletal element | 3.65e-16 | 90 |
musculoskeletal system | 2.44e-15 | 167 |
immune system | 2.48e-14 | 93 |
hematopoietic system | 3.36e-14 | 98 |
blood island | 3.36e-14 | 98 |
hemolymphoid system | 5.30e-12 | 108 |
lateral plate mesoderm | 1.28e-11 | 203 |
mesoderm | 1.28e-09 | 315 |
mesoderm-derived structure | 1.28e-09 | 315 |
presumptive mesoderm | 1.28e-09 | 315 |
connective tissue | 1.23e-08 | 371 |