FFCP PHASE1:Hg19::chr19:544039..544065,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4712 | |||
|TSSclassifier=strong | |||
|UniProt=P51124 | |||
|association_with_transcript=12bp_to_ENST00000264553,NM_005317,uc002low.1_5end | |||
|cluster_id=chr19:544039..544065,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_GZMM_5end | |||
|id=chr19:544039..544065,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.07e-31!140;CL:0002087!3.88e-30!119;CL:0002031!3.48e-24!124;CL:0000037!8.79e-23!172;CL:0000566!8.79e-23!172;CL:0002032!6.63e-21!165;CL:0000837!6.63e-21!165;CL:0000988!3.32e-20!182;CL:0000084!9.15e-19!25;CL:0000827!9.15e-19!25;CL:0000791!4.86e-18!18;CL:0000789!4.86e-18!18;CL:0002420!4.86e-18!18;CL:0002419!4.86e-18!18;CL:0000790!4.86e-18!18;CL:0002057!9.91e-16!42;CL:0000766!1.96e-15!76;CL:0000838!2.34e-14!52;CL:0002194!3.34e-14!63;CL:0000576!3.34e-14!63;CL:0000040!3.34e-14!63;CL:0000559!3.34e-14!63;CL:0000542!8.02e-14!53;CL:0000051!8.02e-14!53;CL:0000860!8.08e-14!45;CL:0002009!2.68e-13!65;CL:0000625!4.03e-12!11;CL:0000839!2.67e-11!70;CL:0000557!6.12e-11!71;CL:0000763!8.39e-09!112;CL:0000049!8.39e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.44e-27;18!CL:0000789;1.44e-27;18!CL:0002419;1.44e-27;18!CL:0000084;2.70e-24;25!CL:0000625;3.31e-18;11!CL:0002087;6.73e-11;104!CL:0000542;6.77e-10;53!CL:0000624;1.50e-09;6!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33!CL:0000576;2.49e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.51e-27,18;CL:0000789,1.51e-27,18;CL:0002420,1.51e-27,18;CL:0002419,1.51e-27,18;CL:0000790,1.51e-27,18;CL:0000738,3.09e-27,136;CL:0002087,1.41e-26,115;CL:0000084,2.85e-24,25;CL:0000827,2.85e-24,25;CL:0002031,4.30e-21,120;CL:0000037,7.01e-20,168;CL:0000625,3.37e-18,11;CL:0002032,7.00e-18,161;CL:0000837,7.00e-18,161;CL:0000988,7.13e-18,177;CL:0000838,3.87e-17,52;CL:0000542,1.24e-16,53;CL:0000051,1.24e-16,53;CL:0000766,1.09e-10,72;CL:0000624,1.53e-09,6;CL:0000860,1.62e-09,42;CL:0002057,1.62e-09,42;CL:0002194,1.58e-08,59;CL:0000576,1.58e-08,59;CL:0000040,1.58e-08,59;CL:0000559,1.58e-08,59;CL:0000473,2.00e-08,48;CL:0000234,2.00e-08,48;CL:0002009,4.92e-08,61;CL:0000839,6.07e-07,66;CL:0000557,9.53e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;1.44e-27;18!CL:0000051;6.77e-10;53!CL:0002057;2.09e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-16!102;UBERON:0003061!1.73e-16!102;UBERON:0002193!1.03e-14!112;UBERON:0002405!7.99e-09!115;UBERON:0007023!1.52e-08!115;UBERON:0000178!1.86e-08!15;UBERON:0000179!1.86e-08!15;UBERON:0000463!1.86e-08!15;UBERON:0002371!3.44e-08!80;UBERON:0001474!3.77e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.10e-13;15!UBERON:0000179;2.10e-13;15!UBERON:0000463;2.10e-13;15!UBERON:0002390;6.55e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.39e-16,98;UBERON:0003061,6.39e-16,98;UBERON:0002193,4.57e-15,108;UBERON:0000178,2.13e-13,15;UBERON:0000179,2.13e-13,15;UBERON:0000463,2.13e-13,15;UBERON:0002405,8.42e-08,93;UBERON:0004177,1.46e-07,7;UBERON:0005057,1.46e-07,7;UBERON:0002370,8.10e-07,4;UBERON:0005058,8.10e-07,4;UBERON:0009113,8.10e-07,4;UBERON:0003295,8.10e-07,4;UBERON:0005562,8.10e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,43.2700704533794,77.533538415637,38.2395824590708,0,0,0,0,0,0,17.7278530730201,20.0544447470142,28.6454349344924,2.01523926815932,7.12566065241755,2.31818010870768,1.16318591023652,1.88937971844405,0.242584061187816,0.697287110717054,1.6446715520873,0.929119112685311,1.1507695692886,1.5369642391746,0.236482229888585,4.48169384957604,1.93645405075148,0,1.50593871634084,1.63743690034707,0.898893937780338,3.06083892370903,1.92557416245656,1.27867425159808,0.989553900560148,1.19678194572979,0.426224750532694,1.45104619314292,2.26954089876456,0.622822248995575,2.51248665256743,1.5644487552606,0.434377689410233,4.23779651843358,1.84138817993782,1.26584954976354,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0.285012743741249,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0,0.400395987036012,1.14950487990897,0.661044872784862,0,0,1.76171156811282,0.764546456250458,0,19.6177997043538,0,24.1953017240015,62.095700514368,37.0082698199117,37.6169614629026,48.8883399950386,37.8758244587787,40.9136129656614,50.4689369689836,24.7468962278863,30.7932113471233,10.5613506868356,51.1084365705444,32.5148368899696,36.9985285358271,42.8342527568065,51.2951461751043,53.97630899099,58.0563596954677,52.2677619024884,38.7517952025676,85.0749495796265,93.4666651712753,33.1455796545549,156.734183847456,246.109545557726,264.225668356648,90.3450714466637,84.8551231953794,164.908559049097,136.857251681442,227.45245514713,101.609798585265,185.336055677971,105.432166026678,0,0,1.15076305659177,0,0,0,0,0,0,0,0.702678285545008,0.916853528483988,0,0,0.97364218096405,1.0447784237956,0.26591592103773,0.953962497221368,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,15.511210565933,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0025378668211,0,0,0,2.84313558994037,0,0.904318131178758,0,0.399891964728228,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,78.3475156514756,112.110502554897,153.095578150257,122.054227502041,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.804708649874,40.7699839547186,61.3683457369805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.844430541190656,0,0,0,0,1.34060455107157,0,1.69458841398202,0,0,0,0,43.6404943939666,48.1721440499696,54.1164827815454,43.8346466842332,35.7885177584989,31.1267189372504,46.4427036024779,62.6568889272474,0.106824071127473,0,0,0,0,0.497992903438899,1.27541018183058,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0.111443384277478,0,0,0.593929361665277,0,0,0.422008249231538,0,0,0,1.9924798825107,9.94622095912132,0,0,0,0,0,0,0,0.493217028184668,91.0035750918371,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,2.33283690706603,0,0,0,0,0,0,0.658156191461918,0,0,0.461701551022782,0.227884111694002,0.23056390438806,0,0,1.27600463892768,0.183195186803725,1.5991043280559,50.0747161159109,0,0.166211681900156,1.1279783030859,0.980312671588698,2.51732380463764,0,0.476809736941136,0,0,0,0,0,2.29989667708682,4.27721101453538,0,0,0,0.067401132980677,3.21031058919516,0,1.82454789215666,0,0,0,7.25944296291983,0,1.76922422959766,0,0.103688191397247,0,0,0.313932918407225,0,0,0.554698692052555,0,0,0,1.92199335066233,0,0,0,0,1.26085721434945,0,0,0,0,0.0633107959558787,0.195551382734803,0,3.20179492109029,0,0,0.114536596165916,0.343189995723929,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0.262887354279314,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.268733889946905,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,18.923119283861,0.879313402068495,0,0,0.26446520348538,0,0,3.9511342650047,0.943225830597996,0.828478110694391,8.93098839261511,0.395223263795889,0,0,0,0.2506898940227,0,0,0.471162288750703,0,0,0.1251909307065,0,0.110929051536852,0.310482014706917,0,0,0,1.42732666772484,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,1.31043939538565,0,0,1.39991177098451,0,0,0,0,0,2.48830904013189,0,0,0.629063767423586,0,5.43144095852881,4.67664824223702,6.56859550572712,11.1728983594649,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.451261970095544,0.80682027481408,0,0,0,0,0.135075169236789,0,1.03343398250592,0,0,1.09651553371436,0,6.68310728566558,0,0,0.336283722218824,0,0,0.887023701626388,0,0.171488009437418,0.203909198930495,0.131545547125698,0,0,1.0989032999072,0,0,2.73947616152849,0,0,1.00067161847319,0.158013611732727,0.929931402945002,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0.410651227424988,1.1598144313382,0.485710993059139,0,0,0,0,0.769583617218004,0.754814217833368,2.77826969188601,4.15263164957519,0,0.245148321753905,0,0,0,0,0,6.29692250465019,8.83073065238007,0,0,0,0,1.46067277649303,8.71585638468627,0,0,0,0,10.580536810308,0,0,0,0,0,4.56114603641173,0.509944148709909,0,0.18378979906969,0.250707539292375,0.530450887527676,0,0,0.20686599172379,1.91910583710883,0.952257725854961,15.9534607294935,9.74573014444969,0,0.318235791390825,0.606351566874658,0.653150243690884,0.342233301085281,7.13931761954628,1.00411087549747,0,0,0,0,0,0,0.611207220914332,0.406896178315738,0,15.095534519327,0 | |||
|short_description=p1@GZMM | |||
}} |
Latest revision as of 20:27, 19 September 2015
Short description: | p1@GZMM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GZMM_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 12bp_to_ENST00000264553, NM_005317, uc002low.1_5end |
EntrezGene: | GZMM |
HGNC: | 4712 |
UniProt: | P51124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.39e-16 | 98 |
blood island | 6.39e-16 | 98 |
hemolymphoid system | 4.57e-15 | 108 |
blood | 2.13e-13 | 15 |
haemolymphatic fluid | 2.13e-13 | 15 |
organism substance | 2.13e-13 | 15 |
immune system | 8.42e-08 | 93 |
hemopoietic organ | 1.46e-07 | 7 |
immune organ | 1.46e-07 | 7 |
thymus | 8.10e-07 | 4 |
hemolymphoid system gland | 8.10e-07 | 4 |
thymic region | 8.10e-07 | 4 |
pharyngeal gland | 8.10e-07 | 4 |
thymus primordium | 8.10e-07 | 4 |