FFCP PHASE1:Hg19::chr12:6485243..6485254,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000536411_5end | |association_with_transcript=-49bp_to_ENST00000536411_5end | ||
|cluster_id=chr12:6485243..6485254,- | |||
|description=CAGE_peak_18_at_SCNN1A_5end | |description=CAGE_peak_18_at_SCNN1A_5end | ||
|id=chr12:6485243..6485254,- | |id=chr12:6485243..6485254,- | ||
|ontology_enrichment_celltype=CL:0000066!1.23e-31!254;CL:0000223!4.78e-19!59;CL:0002076!2.37e-15!43;CL:0002368!4.66e-07!13;CL:0000239!9.73e-07!3;CL:1000615!9.73e-07!3;CL:0002306!9.73e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.23e-31!254;CL:0000223!4.78e-19!59;CL:0002076!2.37e-15!43;CL:0002368!4.66e-07!13;CL:0000239!9.73e-07!3;CL:1000615!9.73e-07!3;CL:0002306!9.73e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.24e-35;3!CL:1000615;2.24e-35;3!CL:0002306;2.24e-35;3!CL:0002536;1.01e-24;2!CL:0002681;2.60e-24;12!CL:0002584;2.60e-24;12!CL:1000449;1.85e-19;15!CL:1000507;7.18e-19;10!CL:1000494;7.18e-19;10!CL:1000497;3.59e-17;17!CL:0002518;3.59e-17;17!CL:1000746;1.06e-07;7!CL:1000612;1.06e-07;7!CL:0000650;3.92e-07;2!CL:1000500;3.92e-07;2!CL:1000618;3.92e-07;2!CL:1001318;3.92e-07;2!CL:0002173;3.92e-07;2!CL:1000415;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.20e-35,3;CL:1000615,3.20e-35,3;CL:0002306,3.20e-35,3;CL:0002536,4.95e-25,2;CL:0002681,3.49e-24,12;CL:0002584,3.49e-24,12;CL:1000449,2.34e-19,15;CL:1000507,9.50e-19,10;CL:1000494,9.50e-19,10;CL:1000497,4.41e-17,17;CL:0002518,4.41e-17,17;CL:1000746,1.17e-07,7;CL:1000612,1.17e-07,7;CL:1000415,2.91e-07,2;CL:0000066,3.39e-07,253;CL:0000650,4.69e-07,2;CL:1000500,4.69e-07,2;CL:1000618,4.69e-07,2;CL:1001318,4.69e-07,2;CL:0002173,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.92e-07;2!UBERON:0010056;3.92e-07;2 | |||
|ontology_enrichment_disease=DOID:305!2.55e-32!106;DOID:0050687!6.49e-23!143;DOID:1749!3.77e-14!14;DOID:162!1.81e-10!235;DOID:14566!6.30e-10!239;DOID:299!2.75e-07!25 | |ontology_enrichment_disease=DOID:305!2.55e-32!106;DOID:0050687!6.49e-23!143;DOID:1749!3.77e-14!14;DOID:162!1.81e-10!235;DOID:14566!6.30e-10!239;DOID:299!2.75e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;2.43e-07;2!DOID:3910;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.58e-07,2;DOID:3910,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.15e-17!169;UBERON:0000925!1.15e-17!169;UBERON:0006595!1.15e-17!169;UBERON:0000077!2.33e-16!130;UBERON:0001007!3.78e-15!155;UBERON:0001555!3.78e-15!155;UBERON:0007026!3.78e-15!155;UBERON:0004921!3.96e-15!129;UBERON:0004185!3.96e-15!129;UBERON:0008947!6.62e-14!38;UBERON:0003258!6.62e-14!38;UBERON:0001041!2.00e-13!98;UBERON:0001004!4.84e-13!72;UBERON:0000065!9.27e-13!53;UBERON:0005177!6.38e-12!107;UBERON:0005153!1.33e-11!37;UBERON:0000466!1.21e-10!126;UBERON:0001737!2.52e-10!9;UBERON:0006554!5.94e-10!44;UBERON:0001008!1.31e-09!45;UBERON:0000464!1.79e-09!104;UBERON:0000072!3.25e-09!46;UBERON:0001048!4.29e-09!168;UBERON:0005911!9.19e-09!82;UBERON:0003104!4.53e-08!238;UBERON:0009142!4.53e-08!238;UBERON:0000062!8.77e-08!511;UBERON:0000481!1.75e-07!347;UBERON:0005157!4.99e-07!51;UBERON:0006853!9.73e-07!3;UBERON:0007685!9.73e-07!3;UBERON:0004134!9.73e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.24e-35;3!UBERON:0007685;2.24e-35;3!UBERON:0004134;2.24e-35;3!UBERON:0001225;2.60e-24;12!UBERON:0008987;2.60e-24;12!UBERON:0001851;1.85e-19;15!UBERON:0006555;1.85e-19;15!UBERON:0000353;1.85e-19;15!UBERON:0004819;1.85e-19;15!UBERON:0001285;1.85e-19;15!UBERON:0007684;1.85e-19;15!UBERON:0004211;7.18e-19;10!UBERON:0009773;7.18e-19;10!UBERON:0001231;7.18e-19;10!UBERON:0004810;7.18e-19;10!UBERON:0002113;2.66e-17;24!UBERON:0011143;2.66e-17;24!UBERON:0000489;2.89e-14;29!UBERON:0006554;8.84e-14;30!UBERON:0001008;8.84e-14;30!UBERON:0000305;9.88e-08;7!UBERON:0000074;1.06e-07;7!UBERON:0001229;1.06e-07;7!UBERON:0005172;2.79e-07;52!UBERON:0005173;2.79e-07;52!UBERON:0004903;3.92e-07;2!UBERON:0003567;3.92e-07;2!UBERON:0003838;3.92e-07;2!UBERON:0003586;3.92e-07;2!UBERON:0005169;3.92e-07;2!UBERON:0002321;3.92e-07;2!UBERON:0005215;3.92e-07;2!UBERON:0002303;3.92e-07;2!UBERON:0002319;3.92e-07;2!UBERON:0002173;3.92e-07;2!UBERON:0002186;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.20e-35,3;UBERON:0007685,3.20e-35,3;UBERON:0004134,3.20e-35,3;UBERON:0001225,3.49e-24,12;UBERON:0008987,3.49e-24,12;UBERON:0001851,2.34e-19,15;UBERON:0004211,2.34e-19,15;UBERON:0009773,2.34e-19,15;UBERON:0000353,2.34e-19,15;UBERON:0001231,2.34e-19,15;UBERON:0001285,2.34e-19,15;UBERON:0007684,2.34e-19,15;UBERON:0004208,2.34e-19,15;UBERON:0004810,9.50e-19,10;UBERON:0006555,3.78e-18,16;UBERON:0004819,3.78e-18,16;UBERON:0002113,6.87e-16,26;UBERON:0003918,6.87e-16,26;UBERON:0011143,6.87e-16,26;UBERON:0005095,6.87e-16,26;UBERON:0007687,6.87e-16,26;UBERON:0000489,2.82e-13,31;UBERON:0006554,1.24e-11,47;UBERON:0001008,2.24e-11,48;UBERON:0005172,4.75e-10,54;UBERON:0005173,4.75e-10,54;UBERON:0002417,5.56e-09,60;UBERON:0000916,5.56e-09,60;UBERON:0005177,2.41e-08,101;UBERON:0005631,2.81e-08,14;UBERON:0000158,2.81e-08,14;UBERON:0000305,8.08e-08,7;UBERON:0003103,8.16e-08,68;UBERON:0010532,1.17e-07,7;UBERON:0000074,1.17e-07,7;UBERON:0001229,1.17e-07,7;UBERON:0001230,1.17e-07,7;UBERON:0003220,1.17e-07,7;UBERON:0005749,1.17e-07,7;UBERON:0004199,1.17e-07,7;UBERON:0004209,1.17e-07,7;UBERON:0004198,1.17e-07,7;UBERON:0004903,4.17e-07,2;UBERON:0002173,4.17e-07,2;UBERON:0002186,4.17e-07,2;UBERON:0003567,4.69e-07,2;UBERON:0003838,4.69e-07,2;UBERON:0003586,4.69e-07,2;UBERON:0005169,4.69e-07,2;UBERON:0002321,4.69e-07,2;UBERON:0005215,4.69e-07,2;UBERON:0002303,4.69e-07,2;UBERON:0002319,4.69e-07,2;UBERON:0004871,6.06e-07,8;UBERON:0005103,8.35e-07,8;UBERON:0000083,8.35e-07,8;UBERON:0009201,8.35e-07,8;UBERON:0006553,8.35e-07,8;UBERON:0003074,8.35e-07,8;UBERON:0003060,8.35e-07,8 | |||
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| ||
|short_description=p18@SCNN1A | |short_description=p18@SCNN1A | ||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p18@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000536411_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.20e-35 | 3 |
kidney cortex tubule cell | 3.20e-35 | 3 |
epithelial cell of proximal tubule | 3.20e-35 | 3 |
amniotic epithelial cell | 4.95e-25 | 2 |
kidney cortical cell | 3.49e-24 | 12 |
renal cortical epithelial cell | 3.49e-24 | 12 |
epithelial cell of nephron | 2.34e-19 | 15 |
kidney tubule cell | 9.50e-19 | 10 |
nephron tubule epithelial cell | 9.50e-19 | 10 |
kidney cell | 4.41e-17 | 17 |
kidney epithelial cell | 4.41e-17 | 17 |
glomerular cell | 1.17e-07 | 7 |
kidney corpuscule cell | 1.17e-07 | 7 |
epithelial cell of gall bladder | 2.91e-07 | 2 |
epithelial cell | 3.39e-07 | 253 |
mesangial cell | 4.69e-07 | 2 |
kidney interstitial cell | 4.69e-07 | 2 |
juxtaglomerular complex cell | 4.69e-07 | 2 |
renal interstitial pericyte | 4.69e-07 | 2 |
extraglomerular mesangial cell | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.58e-07 | 2 |
lung adenocarcinoma | 4.17e-07 | 2 |