FFCP PHASE1:Hg19::chr1:935467..935484,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:935467..935484,- to FFCP PHASE1:Hg19::chr1:935467..935484,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57801 | |EntrezGene=57801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24149 | |HGNC=24149 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481869_5end | |||
|cluster_id=chr1:935467..935484,- | |||
|description=CAGE_peak_1_at_HES4_5end | |||
|id=chr1:935467..935484,- | |||
|ontology_enrichment_celltype=CL:0000860!9.46e-16!45;CL:0002057!1.12e-15!42;CL:0000066!6.35e-15!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-11;33!CL:0002057;1.55e-11;33!CL:0000576;3.83e-07;48!CL:1000449;5.95e-07;15!CL:1000497;6.12e-07;17!CL:0002518;6.12e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.99e-16,42;CL:0002057,5.99e-16,42;CL:0000066,3.52e-15,253;CL:0000473,6.36e-11,48;CL:0000234,6.36e-11,48;CL:1000449,5.20e-07,15;CL:1000497,5.70e-07,17;CL:0002518,5.70e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002057;7.80e-12;42 | |||
|ontology_enrichment_disease=DOID:305!1.08e-08!106;DOID:0050687!5.68e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.59e-09,106;DOID:0050687,5.17e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000922!8.23e-14!612;UBERON:0000468!8.38e-13!659;UBERON:0000062!9.91e-13!511;UBERON:0002050!2.59e-12!605;UBERON:0005423!2.59e-12!605;UBERON:0000467!4.36e-12!625;UBERON:0000923!4.79e-12!604;UBERON:0005291!4.79e-12!604;UBERON:0006598!4.79e-12!604;UBERON:0002532!4.79e-12!604;UBERON:0000480!8.60e-12!626;UBERON:0003103!1.53e-10!69;UBERON:0001008!7.34e-10!45;UBERON:0000489!9.04e-10!32;UBERON:0006554!1.13e-09!44;UBERON:0005177!5.00e-09!107;UBERON:0002113!6.99e-09!27;UBERON:0003918!6.99e-09!27;UBERON:0005095!6.99e-09!27;UBERON:0007687!6.99e-09!27;UBERON:0005172!9.60e-09!55;UBERON:0005173!9.60e-09!55;UBERON:0009569!1.73e-07!113;UBERON:0000058!2.40e-07!26;UBERON:0002417!3.07e-07!61;UBERON:0000916!3.07e-07!61;UBERON:0003064!5.87e-07!37;UBERON:0000025!6.15e-07!194;UBERON:0004111!9.77e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.17e-11;30!UBERON:0001008;1.17e-11;30!UBERON:0000489;2.78e-10;29!UBERON:0002113;1.73e-09;24!UBERON:0011143;1.73e-09;24!UBERON:0003103;5.24e-07;61!UBERON:0000353;5.78e-07;15!UBERON:0001851;5.80e-07;15!UBERON:0006555;5.95e-07;15!UBERON:0004819;5.95e-07;15!UBERON:0001285;5.95e-07;15!UBERON:0007684;5.95e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.82e-12,592;UBERON:0003103,4.71e-11,68;UBERON:0005423,1.23e-10,581;UBERON:0000489,1.34e-10,31;UBERON:0005177,8.48e-10,101;UBERON:0002113,1.01e-09,26;UBERON:0003918,1.01e-09,26;UBERON:0011143,1.01e-09,26;UBERON:0005095,1.01e-09,26;UBERON:0007687,1.01e-09,26;UBERON:0005172,1.44e-09,54;UBERON:0005173,1.44e-09,54;UBERON:0001008,1.81e-09,48;UBERON:0006554,2.81e-09,47;UBERON:0002417,9.56e-08,60;UBERON:0000916,9.56e-08,60;UBERON:0009569,3.33e-07,112;UBERON:0000025,3.52e-07,192;UBERON:0006555,3.73e-07,16;UBERON:0004819,3.73e-07,16;UBERON:0004111,4.46e-07,240;UBERON:0000353,5.07e-07,15;UBERON:0001851,5.12e-07,15;UBERON:0004211,5.20e-07,15;UBERON:0009773,5.20e-07,15;UBERON:0001231,5.20e-07,15;UBERON:0001285,5.20e-07,15;UBERON:0007684,5.20e-07,15;UBERON:0004208,5.20e-07,15;UBERON:0002050,6.61e-07,564;UBERON:0000923,9.40e-07,560;UBERON:0010316,9.40e-07,560;UBERON:0005291,9.40e-07,560;UBERON:0006598,9.40e-07,560;UBERON:0010317,9.40e-07,560;UBERON:0002532,9.40e-07,560 | |||
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| ||
|short_description=p1@HES4 | |||
}} | }} |
Latest revision as of 21:12, 19 September 2015
Short description: | p1@HES4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HES4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481869_5end |
EntrezGene: | HES4 |
HGNC: | 24149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.99e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.99e-16 | 42 |
epithelial cell | 3.52e-15 | 253 |
defensive cell | 6.36e-11 | 48 |
phagocyte | 6.36e-11 | 48 |
epithelial cell of nephron | 5.20e-07 | 15 |
kidney cell | 5.70e-07 | 17 |
kidney epithelial cell | 5.70e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.59e-09 | 106 |
cell type cancer | 5.17e-07 | 143 |