FFCP PHASE1:Hg19::chr17:37309281..37309308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57125 | |EntrezGene=57125 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20945 | |HGNC=20945 | ||
|TSSclassifier=strong | |||
|UniProt=B3KSI0 | |UniProt=B3KSI0 | ||
|association_with_transcript=176bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end | |association_with_transcript=176bp_to_ENST00000461225,ENST00000539608,uc002hrj.1,uc002hrk.1_5end | ||
|cluster_id=chr17:37309281..37309308,- | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_4_at_PLXDC1_5end | |description=CAGE_peak_4_at_PLXDC1_5end | ||
|id=chr17:37309281..37309308,- | |id=chr17:37309281..37309308,- | ||
|ontology_enrichment_celltype=CL:0000791!1.36e-19!18;CL:0000789!1.36e-19!18;CL:0002420!1.36e-19!18;CL:0002419!1.36e-19!18;CL:0000790!1.36e-19!18;CL:0000084!6.96e-17!25;CL:0000827!6.96e-17!25;CL:0000625!1.07e-14!11;CL:0000624!4.59e-08!6;CL:0000838!6.56e-08!52;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53 | |ontology_enrichment_celltype=CL:0000791!1.36e-19!18;CL:0000789!1.36e-19!18;CL:0002420!1.36e-19!18;CL:0002419!1.36e-19!18;CL:0000790!1.36e-19!18;CL:0000084!6.96e-17!25;CL:0000827!6.96e-17!25;CL:0000625!1.07e-14!11;CL:0000624!4.59e-08!6;CL:0000838!6.56e-08!52;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.78e-48;18!CL:0000789;8.78e-48;18!CL:0002419;8.78e-48;18!CL:0000625;5.11e-41;11!CL:0000084;1.61e-38;25!CL:0000624;1.81e-12;6!CL:0000542;7.54e-12;53!CL:0000623;3.88e-07;3!CL:0000784;6.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.98e-48,18;CL:0000789,1.98e-48,18;CL:0002420,1.98e-48,18;CL:0002419,1.98e-48,18;CL:0000790,1.98e-48,18;CL:0000625,1.97e-41,11;CL:0000084,4.85e-39,25;CL:0000827,4.85e-39,25;CL:0000838,3.88e-22,52;CL:0000542,1.21e-21,53;CL:0000051,1.21e-21,53;CL:0000624,1.02e-12,6;CL:0002087,4.11e-10,115;CL:0000738,6.17e-09,136;CL:0002031,2.22e-08,120;CL:0000623,4.53e-07,3;CL:0000825,4.53e-07,3;CL:0000784,9.91e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.78e-48;18!CL:0000051;7.54e-12;53!UBERON:0003056;6.70e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.51e-33!115;UBERON:0001049!7.23e-13!57;UBERON:0005068!7.23e-13!57;UBERON:0006241!7.23e-13!57;UBERON:0007135!7.23e-13!57;UBERON:0002780!3.91e-12!41;UBERON:0001890!3.91e-12!41;UBERON:0006240!3.91e-12!41;UBERON:0002616!4.30e-12!59;UBERON:0003080!1.17e-11!42;UBERON:0000955!4.80e-11!69;UBERON:0006238!4.80e-11!69;UBERON:0001017!1.13e-09!82;UBERON:0005743!1.61e-09!86;UBERON:0003075!4.33e-09!86;UBERON:0007284!4.33e-09!86;UBERON:0000073!7.37e-09!94;UBERON:0001016!7.37e-09!94;UBERON:0002020!1.24e-08!34;UBERON:0003528!1.24e-08!34;UBERON:0001893!2.16e-08!34;UBERON:0002346!3.18e-08!90;UBERON:0000178!3.29e-08!15;UBERON:0000179!3.29e-08!15;UBERON:0000463!3.29e-08!15;UBERON:0002791!7.41e-08!33;UBERON:0001869!1.53e-07!32;UBERON:0003056!3.33e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.88e-11;2!UBERON:0005058;4.88e-11;2!UBERON:0009113;4.88e-11;2!UBERON:0000178;2.18e-10;15!UBERON:0000179;2.18e-10;15!UBERON:0000463;2.18e-10;15!UBERON:0001905;2.65e-10;2!UBERON:0002757;2.65e-10;2!UBERON:0010134;2.65e-10;2!UBERON:0005408;2.65e-10;2!UBERON:0001899;2.65e-10;2!UBERON:0002390;4.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.32e-11,4;UBERON:0005058,2.32e-11,4;UBERON:0009113,2.32e-11,4;UBERON:0003295,2.32e-11,4;UBERON:0005562,2.32e-11,4;UBERON:0000178,1.97e-10,15;UBERON:0000179,1.97e-10,15;UBERON:0000463,1.97e-10,15;UBERON:0001905,5.09e-10,2;UBERON:0002757,5.09e-10,2;UBERON:0010134,5.09e-10,2;UBERON:0005408,5.09e-10,2;UBERON:0001899,5.09e-10,2;UBERON:0003351,1.03e-07,6 | |||
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| ||
|short_description=p4@PLXDC1 | |short_description=p4@PLXDC1 | ||
}} | }} |
Latest revision as of 21:14, 19 September 2015
Short description: | p4@PLXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLXDC1_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | 176bp_to_ENST00000461225, ENST00000539608, uc002hrj.1, uc002hrk.1_5end |
EntrezGene: | PLXDC1 |
HGNC: | 20945 |
UniProt: | B3KSI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.98e-48 | 18 |
alpha-beta T cell | 1.98e-48 | 18 |
immature T cell | 1.98e-48 | 18 |
mature T cell | 1.98e-48 | 18 |
immature alpha-beta T cell | 1.98e-48 | 18 |
CD8-positive, alpha-beta T cell | 1.97e-41 | 11 |
T cell | 4.85e-39 | 25 |
pro-T cell | 4.85e-39 | 25 |
lymphoid lineage restricted progenitor cell | 3.88e-22 | 52 |
lymphocyte | 1.21e-21 | 53 |
common lymphoid progenitor | 1.21e-21 | 53 |
CD4-positive, alpha-beta T cell | 1.02e-12 | 6 |
nongranular leukocyte | 4.11e-10 | 115 |
leukocyte | 6.17e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 2.22e-08 | 120 |
natural killer cell | 4.53e-07 | 3 |
pro-NK cell | 4.53e-07 | 3 |
plasmacytoid dendritic cell | 9.91e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.32e-11 | 4 |
hemolymphoid system gland | 2.32e-11 | 4 |
thymic region | 2.32e-11 | 4 |
pharyngeal gland | 2.32e-11 | 4 |
thymus primordium | 2.32e-11 | 4 |
blood | 1.97e-10 | 15 |
haemolymphatic fluid | 1.97e-10 | 15 |
organism substance | 1.97e-10 | 15 |
pineal body | 5.09e-10 | 2 |
regional part of epithalamus | 5.09e-10 | 2 |
secretory circumventricular organ | 5.09e-10 | 2 |
circumventricular organ | 5.09e-10 | 2 |
epithalamus | 5.09e-10 | 2 |
pharyngeal epithelium | 1.03e-07 | 6 |