FFCP PHASE1:Hg19::chr19:54711907..54711930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-392bp_to_BC020462_5end | |association_with_transcript=-392bp_to_BC020462_5end | ||
|cluster_id=chr19:54711907..54711930,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_RPS9_5end | |description=CAGE_peak_5_at_RPS9_5end | ||
|id=chr19:54711907..54711930,- | |id=chr19:54711907..54711930,- | ||
|ontology_enrichment_celltype=CL:0002057!1.36e-56!42;CL:0000766!1.48e-52!76;CL:0000860!8.23e-52!45;CL:0000738!1.26e-43!140;CL:0000763!1.76e-42!112;CL:0000049!1.76e-42!112;CL:0000557!2.65e-42!71;CL:0000037!5.18e-42!172;CL:0000566!5.18e-42!172;CL:0002009!1.29e-39!65;CL:0002194!1.54e-39!63;CL:0000576!1.54e-39!63;CL:0000040!1.54e-39!63;CL:0000559!1.54e-39!63;CL:0000839!2.51e-39!70;CL:0000988!2.71e-38!182;CL:0002032!5.79e-38!165;CL:0000837!5.79e-38!165;CL:0002087!1.67e-33!119;CL:0002031!4.99e-32!124;CL:0002393!3.43e-14!9;CL:0002397!3.43e-14!9;CL:0000094!3.63e-14!8;CL:0000081!1.02e-09!11;CL:0000134!6.02e-09!358;CL:0002320!8.11e-09!365 | |ontology_enrichment_celltype=CL:0002057!1.36e-56!42;CL:0000766!1.48e-52!76;CL:0000860!8.23e-52!45;CL:0000738!1.26e-43!140;CL:0000763!1.76e-42!112;CL:0000049!1.76e-42!112;CL:0000557!2.65e-42!71;CL:0000037!5.18e-42!172;CL:0000566!5.18e-42!172;CL:0002009!1.29e-39!65;CL:0002194!1.54e-39!63;CL:0000576!1.54e-39!63;CL:0000040!1.54e-39!63;CL:0000559!1.54e-39!63;CL:0000839!2.51e-39!70;CL:0000988!2.71e-38!182;CL:0002032!5.79e-38!165;CL:0000837!5.79e-38!165;CL:0002087!1.67e-33!119;CL:0002031!4.99e-32!124;CL:0002393!3.43e-14!9;CL:0002397!3.43e-14!9;CL:0000094!3.63e-14!8;CL:0000081!1.02e-09!11;CL:0000134!6.02e-09!358;CL:0002320!8.11e-09!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-54;33!CL:0002057;3.07e-54;33!CL:0000576;3.24e-42;48!CL:0000473;1.99e-41;39!CL:0000234;1.99e-41;39!CL:0000766;3.75e-36;69!CL:0000094;3.76e-24;8!CL:0000763;7.26e-20;100!CL:0000081;4.03e-17;11!CL:0002393;2.16e-16;6!CL:0002397;2.16e-16;6!CL:0002087;5.54e-16;104!CL:0000738;4.17e-11;136!CL:0000775;2.06e-10;3!CL:0000767;1.31e-09;3!CL:0000875;1.67e-09;3!CL:0002396;1.67e-09;3!CL:0000226;4.33e-09;3!CL:0000842;4.33e-09;3!CL:0000988;9.68e-09;177!CL:0000771;1.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.04e-83,42;CL:0002057,4.04e-83,42;CL:0000766,1.46e-75,72;CL:0000473,2.12e-75,48;CL:0000234,2.12e-75,48;CL:0002194,3.36e-58,59;CL:0000576,3.36e-58,59;CL:0000040,3.36e-58,59;CL:0000559,3.36e-58,59;CL:0002009,5.56e-56,61;CL:0000557,6.06e-56,67;CL:0000763,9.89e-56,108;CL:0000049,9.89e-56,108;CL:0000839,7.28e-54,66;CL:0000738,4.51e-52,136;CL:0000037,1.13e-46,168;CL:0000988,1.38e-43,177;CL:0002032,2.06e-43,161;CL:0000837,2.06e-43,161;CL:0002087,1.55e-41,115;CL:0002031,3.21e-35,120;CL:0002393,3.00e-24,9;CL:0002397,3.00e-24,9;CL:0000094,3.31e-24,8;CL:0000081,3.68e-17,11;CL:0000134,9.91e-15,354;CL:0002320,3.58e-14,361;CL:0000219,3.26e-12,386;CL:0000048,1.84e-10,427;CL:0000775,2.03e-10,3;CL:0000034,2.62e-10,441;CL:0000723,4.02e-10,433;CL:0000767,1.17e-09,3;CL:0000875,1.75e-09,3;CL:0002396,1.75e-09,3;CL:0000226,3.37e-09,3;CL:0000842,3.37e-09,3;CL:0000771,1.47e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-59;42!CL:0000049;3.19e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-49!102;UBERON:0003061!2.22e-49!102;UBERON:0002193!3.77e-46!112;UBERON:0002371!2.83e-37!80;UBERON:0001474!1.63e-33!86;UBERON:0002405!1.85e-26!115;UBERON:0004765!4.12e-26!101;UBERON:0001434!4.12e-26!101;UBERON:0003081!3.00e-18!216;UBERON:0000178!9.97e-15!15;UBERON:0000179!9.97e-15!15;UBERON:0000463!9.97e-15!15;UBERON:0002204!9.37e-12!167;UBERON:0007023!2.87e-09!115;UBERON:0002384!1.87e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.70e-26;15!UBERON:0000179;3.70e-26;15!UBERON:0000463;3.70e-26;15!UBERON:0002390;5.62e-14;32!UBERON:0002193;4.71e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.05e-68,98;UBERON:0003061,2.05e-68,98;UBERON:0002193,6.71e-61,108;UBERON:0002371,4.01e-48,76;UBERON:0001474,7.43e-44,82;UBERON:0002405,1.59e-39,93;UBERON:0004765,4.81e-39,90;UBERON:0001434,4.15e-34,100;UBERON:0003081,1.39e-27,203;UBERON:0000178,2.97e-26,15;UBERON:0000179,2.97e-26,15;UBERON:0000463,2.97e-26,15;UBERON:0002204,2.16e-17,167;UBERON:0002384,2.06e-13,371;UBERON:0000926,3.98e-13,315;UBERON:0004120,3.98e-13,315;UBERON:0006603,3.98e-13,315 | |||
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|short_description=p5@RPS9 | |short_description=p5@RPS9 | ||
}} | }} |
Latest revision as of 21:36, 19 September 2015
Short description: | p5@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RPS9_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -392bp_to_BC020462_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.05e-68 | 98 |
blood island | 2.05e-68 | 98 |
hemolymphoid system | 6.71e-61 | 108 |
bone marrow | 4.01e-48 | 76 |
bone element | 7.43e-44 | 82 |
immune system | 1.59e-39 | 93 |
skeletal element | 4.81e-39 | 90 |
skeletal system | 4.15e-34 | 100 |
lateral plate mesoderm | 1.39e-27 | 203 |
blood | 2.97e-26 | 15 |
haemolymphatic fluid | 2.97e-26 | 15 |
organism substance | 2.97e-26 | 15 |
musculoskeletal system | 2.16e-17 | 167 |
connective tissue | 2.06e-13 | 371 |
mesoderm | 3.98e-13 | 315 |
mesoderm-derived structure | 3.98e-13 | 315 |
presumptive mesoderm | 3.98e-13 | 315 |