FFCP PHASE1:Hg19::chr11:69634506..69634517,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2248 | |EntrezGene=2248 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3681 | |HGNC=3681 | ||
|TSSclassifier=strong | |||
|UniProt=P11487 | |UniProt=P11487 | ||
|association_with_transcript=-314bp_to_NM_005247,uc001oph.2_5end | |association_with_transcript=-314bp_to_NM_005247,uc001oph.2_5end | ||
|cluster_id=chr11:69634506..69634517,- | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_5_at_FGF3_5end | |description=CAGE_peak_5_at_FGF3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!8.30e-33!5;CL:0000148!3.63e-08!10;CL:0000541!3.63e-08!10 | |ontology_enrichment_celltype=CL:0002322!8.30e-33!5;CL:0000148!3.63e-08!10;CL:0000541!3.63e-08!10 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.59e-117;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.59e-117;3 | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:5409;2.80e-11;4!DOID:0050615;5.28e-11;16!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |ontology_enrichment_disease_v019=DOID:0050619;6.62e-41;1!DOID:1357;6.62e-41;1!DOID:5409;2.80e-11;4!DOID:0050615;5.28e-11;16!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.62e-41,1;DOID:1357,6.62e-41,1;DOID:5409,2.80e-11,4;DOID:0050615,5.28e-11,16;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002680!1.90e-32!9;UBERON:0001895!1.90e-32!9;UBERON:0010092!1.90e-32!9;UBERON:0002037!7.10e-28!6;UBERON:0006215!7.10e-28!6;UBERON:0004733!1.82e-24!12;UBERON:0002028!1.82e-24!12;UBERON:0007277!1.82e-24!12;UBERON:0004732!1.27e-22!13;UBERON:0001764!8.95e-20!1;UBERON:0001825!8.95e-20!1;UBERON:0003076!1.14e-19!15;UBERON:0003057!1.14e-19!15;UBERON:0000988!2.79e-07!3 | |ontology_enrichment_uberon=UBERON:0002680!1.90e-32!9;UBERON:0001895!1.90e-32!9;UBERON:0010092!1.90e-32!9;UBERON:0002037!7.10e-28!6;UBERON:0006215!7.10e-28!6;UBERON:0004733!1.82e-24!12;UBERON:0002028!1.82e-24!12;UBERON:0007277!1.82e-24!12;UBERON:0004732!1.27e-22!13;UBERON:0001764!8.95e-20!1;UBERON:0001825!8.95e-20!1;UBERON:0003076!1.14e-19!15;UBERON:0003057!1.14e-19!15;UBERON:0000988!2.79e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.71e-59;6!UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0002680;6.49e-40;9!UBERON:0001895;6.49e-40;9!UBERON:0004733;3.31e-30;12!UBERON:0002028;3.31e-30;12!UBERON:0004732;5.79e-28;13 | |ontology_enrichment_uberon_v019=UBERON:0002037;2.71e-59;6!UBERON:0001764;6.62e-41;1!UBERON:0001825;6.62e-41;1!UBERON:0002680;6.49e-40;9!UBERON:0001895;6.49e-40;9!UBERON:0004733;3.31e-30;12!UBERON:0002028;3.31e-30;12!UBERON:0004732;5.79e-28;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.72e-59,6;UBERON:0006215,2.72e-59,6;UBERON:0001764,6.62e-41,1;UBERON:0001825,6.62e-41,1;UBERON:0002680,6.49e-40,9;UBERON:0001895,6.49e-40,9;UBERON:0010092,6.49e-40,9;UBERON:0004733,3.31e-30,12;UBERON:0002028,3.31e-30,12;UBERON:0007277,3.31e-30,12;UBERON:0004732,5.79e-28,13;UBERON:0003076,2.27e-24,15;UBERON:0003057,2.27e-24,15;UBERON:0000073,2.27e-07,53;UBERON:0002616,2.27e-07,53;UBERON:0001049,5.09e-07,56;UBERON:0005068,5.09e-07,56;UBERON:0006241,5.09e-07,56;UBERON:0007135,5.09e-07,56 | |||
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|short_description=p5@FGF3 | |short_description=p5@FGF3 | ||
}} | }} |
Latest revision as of 22:03, 19 September 2015
Short description: | p5@FGF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGF3_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -314bp_to_NM_005247, uc001oph.2_5end |
EntrezGene: | FGF3 |
HGNC: | 3681 |
UniProt: | P11487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.72e-59 | 6 |
rhombic lip | 2.72e-59 | 6 |
maxillary sinus | 6.62e-41 | 1 |
paranasal sinus | 6.62e-41 | 1 |
regional part of metencephalon | 6.49e-40 | 9 |
metencephalon | 6.49e-40 | 9 |
future metencephalon | 6.49e-40 | 9 |
segmental subdivision of hindbrain | 3.31e-30 | 12 |
hindbrain | 3.31e-30 | 12 |
presumptive hindbrain | 3.31e-30 | 12 |
segmental subdivision of nervous system | 5.79e-28 | 13 |
posterior neural tube | 2.27e-24 | 15 |
chordal neural plate | 2.27e-24 | 15 |
regional part of nervous system | 2.27e-07 | 53 |
regional part of brain | 2.27e-07 | 53 |
neural tube | 5.09e-07 | 56 |
neural rod | 5.09e-07 | 56 |
future spinal cord | 5.09e-07 | 56 |
neural keel | 5.09e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.62e-41 | 1 |
maxillary sinus cancer | 6.62e-41 | 1 |
lung small cell carcinoma | 2.80e-11 | 4 |
respiratory system cancer | 5.28e-11 | 16 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |