FFCP PHASE1:Hg19::chr1:94375085..94375096,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4312 | |||
|TSSclassifier=strong | |||
|UniProt=P48507 | |||
|association_with_transcript=-73bp_to_NM_002061,uc001dqg.1_5end | |||
|cluster_id=chr1:94375085..94375096,- | |||
|description=CAGE_peak_5_at_GCLM_5end | |||
|id=chr1:94375085..94375096,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-15!115;UBERON:0000073!2.83e-14!94;UBERON:0001016!2.83e-14!94;UBERON:0005743!9.02e-14!86;UBERON:0001017!2.74e-13!82;UBERON:0000955!3.17e-12!69;UBERON:0006238!3.17e-12!69;UBERON:0001049!2.99e-11!57;UBERON:0005068!2.99e-11!57;UBERON:0006241!2.99e-11!57;UBERON:0007135!2.99e-11!57;UBERON:0002616!1.26e-10!59;UBERON:0003080!1.37e-08!42;UBERON:0002346!2.82e-08!90;UBERON:0002780!4.05e-08!41;UBERON:0001890!4.05e-08!41;UBERON:0006240!4.05e-08!41;UBERON:0003075!5.76e-08!86;UBERON:0007284!5.76e-08!86;UBERON:0000153!6.09e-08!129;UBERON:0007811!6.09e-08!129;UBERON:0001893!3.15e-07!34;UBERON:0002020!3.25e-07!34;UBERON:0003528!3.25e-07!34;UBERON:0000033!3.93e-07!123;UBERON:0002791!6.98e-07!33;UBERON:0001869!7.82e-07!32;UBERON:0000924!8.20e-07!173;UBERON:0006601!8.20e-07!173;UBERON:0003056!9.45e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-12,81;UBERON:0001016,5.14e-12,89;UBERON:0000955,4.56e-11,68;UBERON:0006238,4.56e-11,68;UBERON:0007023,6.02e-11,114;UBERON:0000073,4.33e-10,53;UBERON:0002616,4.33e-10,53;UBERON:0001049,6.38e-10,56;UBERON:0005068,6.38e-10,56;UBERON:0006241,6.38e-10,56;UBERON:0007135,6.38e-10,56;UBERON:0003075,1.82e-08,82;UBERON:0007284,1.82e-08,82;UBERON:0002346,4.18e-08,86;UBERON:0011216,2.91e-07,223;UBERON:0003528,9.45e-07,34;UBERON:0002020,9.45e-07,34 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,0,0.446961094427288,0,5.06599756336621,0,0.783556884599516,0,0,0,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.738726348460727,1.42800483870977,1.25381888591235,0.85870796139317,0.821246550437305,1.25542639594803,1.29902789771517,2.8735206307481,2.51874500203774,0,0,0.154816123316076,0,0,0.369754010166788,1.23947520928483,0.853015394924529,0.293600439334847,0,0.401088894940283,0.217010870715852,0.671746422719773,1.6194683300949,0.77272670290256,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0.19891667719909,0.365328307529268,0,1.09227722252426,2.66852776159066,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0.526768169550154,1.37696839079683,0,0.616804496998528,0.668745981562712,0,0.946895611469467,1.94826728407911,1.00269411196656,0,0.664601683750863,0.812411591295047,1.15282187753108,1.1705341280389,1.64437904603676,1.93445012450094,0,0.296573126324121,0.535081656179426,2.09071047609954,2.15287751125376,0.766440987203842,0.34362744548263,0.506039384039006,1.27426165729639,1.95325036156926,0.950452044448374,0.752875595388864,0.895906278080929,2.49861453104692,0.236777252044017,2.46338399076314,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0.767175371061182,0.361439152384566,0.50133791063589,1.01392563272577,0,0.486634870302636,0.850813354476611,0.221729397462564,0.351339142772504,0.654895377488563,0,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0.535798369704479,0.898117490504679,0.675668882899933,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,0,0.709336764396714,0.560677600142307,0,0.49333509683432,0.622422070799533,0.808264032418128,0.326923806226917,1.21085942115945,0,0.937285727335186,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0.61246251376468,0.245668634623536,0.723280468230358,0,1.23633464639278,0,0,0.168336113954066,0,0,0,1.83892677479412,1.05166641234618,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.309157587715317,1.54584324027377,0.558350568994769,0,0.194874010322397,0.504867548488229,0.736399189138395,0.323292113637624,0,0.403008392910561,0.339121184620975,0,0,0,0.609868530647977,0.397589304964456,0.348581828608555,1.0366105501537,1.00928340350251,1.82488679537915,0,0,0,0,0,0.828147600278907,0.674338760312407,0.964044119533928,0.661763836394364,0.435758888184812,0.71181185733329,0.404493924480493,0.196221465125346,0.769494313892781,2.21446636387394,0,0.4115740113314,0,1.26755034821831,0,1.77236972004421,1.32438929824395,0.122988438543114,0.171567810298526,0.109750285408626,0,0.301586917234893,0.462942225792648,0.325808305310325,0,0,0.463721619900307,0.352226082707465,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0.492434012174795,0.702012795417713,1.0404181360211,0,0,0,0.447792613514241,0.871901815541886,0.383382679165211,0,0.528290604079356,0.414656231081544,0.144119953416961,0.25248486685276,0.63497894292169,0.763976851116555,0,0,0.822619941626588,0.901029173531752,1.14330573052231,0.336393253036082,0.87192013766656,0.36669142910475,0.646358578788889,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0.542621605391443,2.46972101034231,0,0.710783897485092,0,0.301439377059586,0,0.699810938274399,0,0.502257091432126,0,0,1.14861935834114,0,0,0.205476322550383,0,1.12085143993527,1.37921532141349,0.431255149719035,0.513372145118994,0.508189248444927,1.30139853857622,0,0.502548796003046,1.91381625495949,0,0,0.414415513436035,0.613457458595699,0.500170521059677,0,0.415941723061614,1.07057393278297,0.788512075169673,0.702848489956279,0.902838299183157,0,0,0.664225598535437,0,0.260650843404249,0.783204629850962,1.02943027143257,0.620304078368662,0,0.640365346820666,0,0,0.604780586659361,0.248107807818777,0.460385919864187,0.841980283299221,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0.116210378459959,0.362578348774867,0.200506470303285,0.0920809889358963,0.574072240823034,0.182091168006717,1.18011973463482,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0.438519753291869,0.522870902049801,1.28225062558195,0,1.30151357865721,1.854738209659,4.39533431128048,3.21787049690293,0.574265537996172,0.650060246036521,0,0.870036464629098,0.154048617114644,0.307007349452259,0,0.322260734604821,0,0.426133137080504,0.623224249527161,0.165284915360978,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0.76252077569529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| |||
|short_description=p5@GCLM | |||
}} |
Latest revision as of 22:26, 19 September 2015
Short description: | p5@GCLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GCLM_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_NM_002061, uc001dqg.1_5end |
EntrezGene: | GCLM |
HGNC: | 4312 |
UniProt: | P48507 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.08e-12 | 81 |
nervous system | 5.14e-12 | 89 |
brain | 4.56e-11 | 68 |
future brain | 4.56e-11 | 68 |
adult organism | 6.02e-11 | 114 |
regional part of nervous system | 4.33e-10 | 53 |
regional part of brain | 4.33e-10 | 53 |
neural tube | 6.38e-10 | 56 |
neural rod | 6.38e-10 | 56 |
future spinal cord | 6.38e-10 | 56 |
neural keel | 6.38e-10 | 56 |
neural plate | 1.82e-08 | 82 |
presumptive neural plate | 1.82e-08 | 82 |
neurectoderm | 4.18e-08 | 86 |
organ system subdivision | 2.91e-07 | 223 |
brain grey matter | 9.45e-07 | 34 |
gray matter | 9.45e-07 | 34 |