FFCP PHASE1:Hg19::chr14:36989336..36989354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522719_5end | |association_with_transcript=0bp_to_ENST00000522719_5end | ||
|cluster_id=chr14:36989336..36989354,- | |||
|coexpression_cluster_id=C1394 | |coexpression_cluster_id=C1394 | ||
|description=CAGE_peak_5_at_NKX2-1_5end | |description=CAGE_peak_5_at_NKX2-1_5end | ||
|id=chr14:36989336..36989354,- | |id=chr14:36989336..36989354,- | ||
|ontology_enrichment_celltype=CL:0002076!2.86e-11!43;CL:0002368!1.21e-08!13;CL:0000223!4.26e-08!59;CL:0000066!4.78e-08!254 | |ontology_enrichment_celltype=CL:0002076!2.86e-11!43;CL:0002368!1.21e-08!13;CL:0000223!4.26e-08!59;CL:0000066!4.78e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.29e-12;13!CL:0000322;9.29e-10;3!CL:0000082;1.42e-08;19!CL:0000167;5.33e-08;1!CL:0000164;5.33e-08;1!CL:0000502;5.33e-08;1!CL:0000172;5.33e-08;1!CL:0000173;5.33e-08;1!CL:0002553;1.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.99e-12,13;CL:0000322,1.02e-09,3;CL:0000082,1.39e-08,19;CL:0000167,4.66e-08,1;CL:0000164,4.66e-08,1;CL:0000502,4.66e-08,1;CL:0000172,4.66e-08,1;CL:0000173,4.66e-08,1;CL:0002351,4.66e-08,1;CL:0002553,9.72e-08,1;CL:0000066,4.35e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.75e-22;5!UBERON:0008947;1.12e-20;29!CL:0002351;5.33e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.56e-15!106;DOID:0050687!7.79e-13!143;DOID:162!5.78e-11!235;DOID:14566!1.71e-10!239;DOID:1749!4.36e-09!14 | |ontology_enrichment_disease=DOID:305!1.56e-15!106;DOID:0050687!7.79e-13!143;DOID:162!5.78e-11!235;DOID:14566!1.71e-10!239;DOID:1749!4.36e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:0050615;2.48e-10;16!DOID:3112;3.80e-08;1!DOID:0050619;5.33e-08;1!DOID:1357;5.33e-08;1!DOID:4430;5.33e-08;1!DOID:3151;1.18e-07;1!DOID:3149;1.18e-07;1!DOID:3905;2.05e-07;9!DOID:1324;2.38e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,2.39e-10,16;DOID:305,3.19e-09,106;DOID:3112,3.55e-08,1;DOID:4430,4.66e-08,1;DOID:0050619,5.70e-08,1;DOID:1357,5.70e-08,1;DOID:3151,8.51e-08,1;DOID:3149,8.51e-08,1;DOID:3905,2.05e-07,9;DOID:1324,2.27e-07,15;DOID:0050687,3.10e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.17e-20!53;UBERON:0008947!9.78e-19!38;UBERON:0003258!9.78e-19!38;UBERON:0001004!1.35e-17!72;UBERON:0001737!1.18e-16!9;UBERON:0004119!3.94e-12!169;UBERON:0000925!3.94e-12!169;UBERON:0006595!3.94e-12!169;UBERON:0000072!2.98e-11!46;UBERON:0001007!1.98e-10!155;UBERON:0001555!1.98e-10!155;UBERON:0007026!1.98e-10!155;UBERON:0000369!1.32e-09!4;UBERON:0002435!1.32e-09!4;UBERON:0000204!1.32e-09!4;UBERON:0010082!1.32e-09!4;UBERON:0002048!1.72e-09!22;UBERON:0000117!1.72e-09!22;UBERON:0000171!1.72e-09!22;UBERON:0000170!1.72e-09!22;UBERON:0005597!1.72e-09!22;UBERON:0000118!1.72e-09!22;UBERON:0002046!4.31e-09!5;UBERON:0004117!4.31e-09!5;UBERON:0007689!4.31e-09!5;UBERON:0007123!4.31e-09!5;UBERON:0003091!4.31e-09!5;UBERON:0001557!9.51e-09!19;UBERON:0005383!6.32e-08!3;UBERON:0005382!6.32e-08!3;UBERON:0001041!7.62e-08!98;UBERON:0005178!7.65e-08!34;UBERON:0002224!7.65e-08!34;UBERON:0004921!1.01e-07!129;UBERON:0004185!1.01e-07!129;UBERON:0005181!1.53e-07!35;UBERON:0000077!3.94e-07!130;UBERON:0005153!4.85e-07!37 | |ontology_enrichment_uberon=UBERON:0000065!2.17e-20!53;UBERON:0008947!9.78e-19!38;UBERON:0003258!9.78e-19!38;UBERON:0001004!1.35e-17!72;UBERON:0001737!1.18e-16!9;UBERON:0004119!3.94e-12!169;UBERON:0000925!3.94e-12!169;UBERON:0006595!3.94e-12!169;UBERON:0000072!2.98e-11!46;UBERON:0001007!1.98e-10!155;UBERON:0001555!1.98e-10!155;UBERON:0007026!1.98e-10!155;UBERON:0000369!1.32e-09!4;UBERON:0002435!1.32e-09!4;UBERON:0000204!1.32e-09!4;UBERON:0010082!1.32e-09!4;UBERON:0002048!1.72e-09!22;UBERON:0000117!1.72e-09!22;UBERON:0000171!1.72e-09!22;UBERON:0000170!1.72e-09!22;UBERON:0005597!1.72e-09!22;UBERON:0000118!1.72e-09!22;UBERON:0002046!4.31e-09!5;UBERON:0004117!4.31e-09!5;UBERON:0007689!4.31e-09!5;UBERON:0007123!4.31e-09!5;UBERON:0003091!4.31e-09!5;UBERON:0001557!9.51e-09!19;UBERON:0005383!6.32e-08!3;UBERON:0005382!6.32e-08!3;UBERON:0001041!7.62e-08!98;UBERON:0005178!7.65e-08!34;UBERON:0002224!7.65e-08!34;UBERON:0004921!1.01e-07!129;UBERON:0004185!1.01e-07!129;UBERON:0005181!1.53e-07!35;UBERON:0000077!3.94e-07!130;UBERON:0005153!4.85e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;9.75e-22;5!UBERON:0000065;1.46e-18;44!UBERON:0001737;2.12e-17;9!UBERON:0001557;2.12e-17;9!UBERON:0000072;6.63e-13;37!UBERON:0001004;5.36e-12;65!UBERON:0002048;2.27e-10;22!UBERON:0000117;2.27e-10;22!UBERON:0000171;2.27e-10;22!UBERON:0000170;2.27e-10;22!UBERON:0004821;9.29e-10;3!UBERON:0007499;9.29e-10;3!UBERON:0003215;9.29e-10;3!UBERON:0010368;9.29e-10;3!UBERON:0009911;9.29e-10;3!UBERON:0002299;9.29e-10;3!UBERON:0006524;9.29e-10;3!UBERON:0008874;9.29e-10;3!UBERON:0002169;9.29e-10;3!UBERON:0004894;9.29e-10;3!UBERON:0004802;1.42e-08;19!UBERON:0000115;1.42e-08;19!UBERON:0001764;5.33e-08;1!UBERON:0001825;5.33e-08;1!UBERON:0009856;1.59e-07;4!UBERON:0004807;2.27e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.15e-21,5;UBERON:0004117,1.15e-21,5;UBERON:0007689,1.15e-21,5;UBERON:0007123,1.15e-21,5;UBERON:0003091,1.15e-21,5;UBERON:0000065,1.72e-20,54;UBERON:0008947,1.41e-18,38;UBERON:0003258,1.41e-18,38;UBERON:0001737,2.44e-17,9;UBERON:0001004,1.61e-16,74;UBERON:0004119,4.09e-12,160;UBERON:0000925,4.09e-12,160;UBERON:0006595,4.09e-12,160;UBERON:0000072,5.13e-12,47;UBERON:0002048,2.31e-10,22;UBERON:0000117,2.31e-10,22;UBERON:0000171,2.31e-10,22;UBERON:0000170,2.31e-10,22;UBERON:0005597,2.31e-10,22;UBERON:0000118,2.31e-10,22;UBERON:0009722,6.21e-10,11;UBERON:0007690,6.21e-10,11;UBERON:0004821,1.02e-09,3;UBERON:0003215,1.02e-09,3;UBERON:0010368,1.02e-09,3;UBERON:0009911,1.02e-09,3;UBERON:0002299,1.02e-09,3;UBERON:0006524,1.02e-09,3;UBERON:0008874,1.02e-09,3;UBERON:0002169,1.02e-09,3;UBERON:0004894,1.02e-09,3;UBERON:0001007,1.67e-09,145;UBERON:0001555,1.67e-09,145;UBERON:0007026,1.67e-09,145;UBERON:0005911,2.06e-09,82;UBERON:0004802,1.39e-08,19;UBERON:0000115,1.39e-08,19;UBERON:0001557,4.01e-08,19;UBERON:0005153,5.42e-08,37;UBERON:0001764,5.70e-08,1;UBERON:0001825,5.70e-08,1;UBERON:0001048,3.17e-07,160;UBERON:0001041,5.18e-07,87 | |||
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| ||
|short_description=p5@NKX2-1 | |short_description=p5@NKX2-1 | ||
}} | }} |
Latest revision as of 22:29, 19 September 2015
Short description: | p5@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NKX2-1_5end |
Coexpression cluster: | C1394_large_bronchioalveolar_prostate_nonsmall_papillary_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000522719_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.99e-12 | 13 |
pneumocyte | 1.02e-09 | 3 |
epithelial cell of lung | 1.39e-08 | 19 |
peptide hormone secreting cell | 4.66e-08 | 1 |
enteroendocrine cell | 4.66e-08 | 1 |
type D enteroendocrine cell | 4.66e-08 | 1 |
somatostatin secreting cell | 4.66e-08 | 1 |
pancreatic D cell | 4.66e-08 | 1 |
progenitor cell of endocrine pancreas | 4.66e-08 | 1 |
lung fibroblast | 9.72e-08 | 1 |
epithelial cell | 4.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 2.39e-10 | 16 |
carcinoma | 3.19e-09 | 106 |
papillary adenocarcinoma | 3.55e-08 | 1 |
somatostatinoma | 4.66e-08 | 1 |
paranasal sinus cancer | 5.70e-08 | 1 |
maxillary sinus cancer | 5.70e-08 | 1 |
skin squamous cell carcinoma | 8.51e-08 | 1 |
keratoacanthoma | 8.51e-08 | 1 |
lung carcinoma | 2.05e-07 | 9 |
lung cancer | 2.27e-07 | 15 |
cell type cancer | 3.10e-07 | 143 |