FFCP PHASE1:Hg19::chr14:37132241..37132304,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:37132241..37132304,+
|short_description=p3@PAX9
|description=CAGE_peak_3_at_PAX9_5end
|association_with_transcript=462bp_to_ENST00000554201_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5083 | |EntrezGene=5083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8623 | |HGNC=8623 | ||
|TSSclassifier=strong | |||
|UniProt=G3V233 | |UniProt=G3V233 | ||
|association_with_transcript=462bp_to_ENST00000554201_5end | |||
|cluster_id=chr14:37132241..37132304,+ | |||
|description=CAGE_peak_3_at_PAX9_5end | |||
|id=chr14:37132241..37132304,+ | |||
|ontology_enrichment_celltype=CL:0002556!3.00e-09!6;CL:0000197!3.31e-09!6;CL:0000098!3.31e-09!6;CL:0002167!3.31e-09!6;CL:0002076!7.85e-08!43;CL:0002552!8.48e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002552;6.56e-16;5!CL:0000197;9.08e-14;6!CL:0000098;9.08e-14;6!CL:0002167;9.08e-14;6!CL:0002556;1.18e-13;6!CL:0002564;4.38e-10;3!CL:0002602;4.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.06e-15,5;CL:0000197,4.44e-14,6;CL:0000098,4.44e-14,6;CL:0002167,4.44e-14,6;CL:0002556,7.60e-14,6;CL:0002564,3.21e-10,3;CL:0002602,4.22e-07,2;CL:0002076,5.03e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.24e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.38e-10;14!DOID:0050615;9.96e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.33e-10,14;DOID:0050615,7.25e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000165!1.36e-27!28;UBERON:0000930!1.36e-27!28;UBERON:0000166!3.79e-19!21;UBERON:0001004!5.07e-19!72;UBERON:0000078!2.23e-18!18;UBERON:0001444!1.37e-17!48;UBERON:0000161!3.64e-17!35;UBERON:0003102!8.86e-16!95;UBERON:0004119!1.47e-12!169;UBERON:0000925!1.47e-12!169;UBERON:0006595!1.47e-12!169;UBERON:0001007!5.61e-11!155;UBERON:0001555!5.61e-11!155;UBERON:0007026!5.61e-11!155;UBERON:0003408!5.84e-11!10;UBERON:0001044!1.66e-09!6;UBERON:0003293!1.66e-09!6;UBERON:0003294!1.66e-09!6;UBERON:0010047!1.66e-09!6;UBERON:0000167!1.66e-09!6;UBERON:0001758!3.00e-09!6;UBERON:0003672!3.00e-09!6;UBERON:0000065!2.73e-08!53;UBERON:0000075!3.61e-08!13;UBERON:0005944!3.61e-08!13;UBERON:0004288!3.61e-08!13;UBERON:0003089!3.61e-08!13;UBERON:0000974!7.76e-08!10;UBERON:0003729!5.16e-07!5;UBERON:0006562!6.55e-07!11;UBERON:0000077!6.61e-07!130;UBERON:0000153!7.26e-07!129;UBERON:0007811!7.26e-07!129;UBERON:0008814!8.61e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.03e-33;28!UBERON:0000161;1.20e-22;19!UBERON:0000166;1.20e-22;19!UBERON:0000075;4.76e-22;16!UBERON:0000033;1.55e-15;50!UBERON:0011135;1.91e-15;5!UBERON:0002216;1.91e-15;5!UBERON:0011134;1.91e-15;5!UBERON:0002209;1.91e-15;5!UBERON:0002213;1.91e-15;5!UBERON:0007844;1.91e-15;5!UBERON:0011138;1.91e-15;5!UBERON:0001130;1.91e-15;5!UBERON:0001066;1.91e-15;5!UBERON:0001468;1.91e-15;5!UBERON:0007811;2.22e-15;52!UBERON:0001044;1.17e-14;6!UBERON:0003293;1.17e-14;6!UBERON:0003294;1.17e-14;6!UBERON:0010047;1.17e-14;6!UBERON:0003408;1.17e-14;6!UBERON:0000167;1.17e-14;6!UBERON:0001555;1.57e-14;54!UBERON:0001041;4.92e-14;14!UBERON:0000153;8.56e-14;54!UBERON:0001758;1.18e-13;6!UBERON:0003672;1.18e-13;6!UBERON:0004905;1.97e-13;8!UBERON:0000982;1.97e-13;8!UBERON:0004770;1.97e-13;8!UBERON:0001444;2.28e-13;48!UBERON:0003129;1.19e-11;7!UBERON:0011137;2.75e-10;11!UBERON:0010323;2.75e-10;11!UBERON:0002242;4.38e-10;3!UBERON:0001828;8.01e-10;8!UBERON:0001004;8.99e-10;65!UBERON:0003729;2.34e-08;13!UBERON:0001829;3.70e-08;2!UBERON:0001434;4.80e-08;36!UBERON:0004089;5.11e-08;2!UBERON:0006562;4.76e-07;2!UBERON:0006444;4.76e-07;2!UBERON:0001995;4.76e-07;2!UBERON:0004715;4.76e-07;2!UBERON:0000344;6.88e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,3.07e-36,29;UBERON:0000930,3.07e-36,29;UBERON:0000166,5.45e-26,22;UBERON:0000075,2.84e-22,16;UBERON:0000161,8.47e-22,36;UBERON:0000153,9.51e-22,62;UBERON:0007811,9.51e-22,62;UBERON:0001444,1.54e-21,49;UBERON:0001004,9.20e-21,74;UBERON:0000033,2.13e-20,56;UBERON:0011137,1.99e-17,14;UBERON:0004119,1.04e-16,160;UBERON:0000925,1.04e-16,160;UBERON:0006595,1.04e-16,160;UBERON:0001007,1.10e-16,145;UBERON:0001555,1.10e-16,145;UBERON:0007026,1.10e-16,145;UBERON:0011135,1.24e-15,5;UBERON:0002216,1.24e-15,5;UBERON:0011134,1.24e-15,5;UBERON:0002209,1.24e-15,5;UBERON:0002213,1.24e-15,5;UBERON:0005856,1.24e-15,5;UBERON:0005866,1.24e-15,5;UBERON:0005863,1.24e-15,5;UBERON:0007844,1.24e-15,5;UBERON:0011138,1.24e-15,5;UBERON:0001130,1.24e-15,5;UBERON:0001066,1.24e-15,5;UBERON:0001468,1.24e-15,5;UBERON:0001044,1.13e-14,6;UBERON:0003293,1.13e-14,6;UBERON:0003294,1.13e-14,6;UBERON:0010047,1.13e-14,6;UBERON:0000167,1.13e-14,6;UBERON:0001758,7.60e-14,6;UBERON:0003672,7.60e-14,6;UBERON:0003102,9.17e-14,99;UBERON:0004905,1.42e-13,8;UBERON:0000982,1.42e-13,8;UBERON:0004770,1.42e-13,8;UBERON:0003408,7.78e-12,10;UBERON:0003129,8.15e-12,7;UBERON:0010323,2.30e-10,11;UBERON:0002242,3.21e-10,3;UBERON:0003068,3.21e-10,3;UBERON:0002328,3.21e-10,3;UBERON:0004880,3.21e-10,3;UBERON:0001828,1.07e-09,8;UBERON:0003729,2.66e-08,13;UBERON:0001829,3.60e-08,2;UBERON:0004089,6.19e-08,2;UBERON:0011216,9.00e-08,223;UBERON:0001041,1.67e-07,87;UBERON:0004921,1.95e-07,118;UBERON:0006444,4.22e-07,2;UBERON:0001995,4.22e-07,2;UBERON:0004715,4.22e-07,2;UBERON:0000344,8.71e-07,20 | |||
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|short_description=p3@PAX9 | |||
}} | }} |
Latest revision as of 22:54, 19 September 2015
Short description: | p3@PAX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAX9_5end |
Coexpression cluster: | NA |
Association with transcript: | 462bp_to_ENST00000554201_5end |
EntrezGene: | PAX9 |
HGNC: | 8623 |
UniProt: | G3V233 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.06e-15 | 5 |
receptor cell | 4.44e-14 | 6 |
sensory epithelial cell | 4.44e-14 | 6 |
olfactory epithelial cell | 4.44e-14 | 6 |
fibroblast of periodontium | 7.60e-14 | 6 |
nucleus pulposus cell of intervertebral disc | 3.21e-10 | 3 |
annulus pulposus cell | 4.22e-07 | 2 |
endo-epithelial cell | 5.03e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.33e-10 | 14 |
respiratory system cancer | 7.25e-07 | 16 |