FFCP PHASE1:Hg19::chr12:6659614..6659640,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25900 | |EntrezGene=25900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24970 | |HGNC=24970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471408,uc001qpb.1_5end | |association_with_transcript=0bp_to_ENST00000471408,uc001qpb.1_5end | ||
|cluster_id=chr12:6659614..6659640,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_4_at_IFFO1_5end | |description=CAGE_peak_4_at_IFFO1_5end | ||
|id=chr12:6659614..6659640,- | |id=chr12:6659614..6659640,- | ||
|ontology_enrichment_celltype=CL:0002057!1.39e-61!42;CL:0002194!1.71e-61!63;CL:0000576!1.71e-61!63;CL:0000040!1.71e-61!63;CL:0000559!1.71e-61!63;CL:0000766!3.31e-61!76;CL:0002009!5.10e-59!65;CL:0000860!2.20e-56!45;CL:0000839!1.89e-53!70;CL:0000557!1.98e-52!71;CL:0000763!8.13e-46!112;CL:0000049!8.13e-46!112;CL:0002087!1.42e-33!119;CL:0000738!5.26e-33!140;CL:0000037!3.35e-30!172;CL:0000566!3.35e-30!172;CL:0002032!5.46e-29!165;CL:0000837!5.46e-29!165;CL:0002031!1.50e-27!124;CL:0000988!3.03e-27!182;CL:0002393!1.46e-12!9;CL:0002397!1.46e-12!9 | |ontology_enrichment_celltype=CL:0002057!1.39e-61!42;CL:0002194!1.71e-61!63;CL:0000576!1.71e-61!63;CL:0000040!1.71e-61!63;CL:0000559!1.71e-61!63;CL:0000766!3.31e-61!76;CL:0002009!5.10e-59!65;CL:0000860!2.20e-56!45;CL:0000839!1.89e-53!70;CL:0000557!1.98e-52!71;CL:0000763!8.13e-46!112;CL:0000049!8.13e-46!112;CL:0002087!1.42e-33!119;CL:0000738!5.26e-33!140;CL:0000037!3.35e-30!172;CL:0000566!3.35e-30!172;CL:0002032!5.46e-29!165;CL:0000837!5.46e-29!165;CL:0002031!1.50e-27!124;CL:0000988!3.03e-27!182;CL:0002393!1.46e-12!9;CL:0002397!1.46e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-90;33!CL:0002057;2.85e-90;33!CL:0000576;4.99e-78;48!CL:0000473;3.24e-75;39!CL:0000234;3.24e-75;39!CL:0000766;7.41e-50;69!CL:0000763;2.76e-27;100!CL:0002087;6.20e-17;104!CL:0002393;8.42e-17;6!CL:0002397;8.42e-17;6!CL:0000738;6.51e-14;136!CL:0000988;3.34e-10;177!CL:0000767;5.95e-09;3!CL:0000094;8.15e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-111,42;CL:0002057,1.01e-111,42;CL:0000473,1.61e-111,48;CL:0000234,1.61e-111,48;CL:0002194,5.33e-109,59;CL:0000576,5.33e-109,59;CL:0000040,5.33e-109,59;CL:0000559,5.33e-109,59;CL:0000766,9.82e-108,72;CL:0002009,4.34e-105,61;CL:0000839,2.47e-96,66;CL:0000557,9.76e-95,67;CL:0000763,1.07e-79,108;CL:0000049,1.07e-79,108;CL:0000738,8.44e-56,136;CL:0002087,3.58e-55,115;CL:0000037,1.56e-50,168;CL:0002032,2.91e-49,161;CL:0000837,2.91e-49,161;CL:0002031,6.99e-48,120;CL:0000988,2.70e-47,177;CL:0000134,6.13e-17,354;CL:0002320,2.39e-16,361;CL:0002393,1.01e-14,9;CL:0002397,1.01e-14,9;CL:0000219,2.86e-14,386;CL:0000048,9.82e-12,427;CL:0000723,2.20e-11,433;CL:0000034,6.20e-11,441;CL:0000767,5.01e-09,3;CL:0000094,6.85e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-80;42!CL:0000049;1.03e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.33e-54!102;UBERON:0003061!6.33e-54!102;UBERON:0002193!1.88e-48!112;UBERON:0002371!2.08e-44!80;UBERON:0001474!5.31e-40!86;UBERON:0004765!1.40e-32!101;UBERON:0001434!1.40e-32!101;UBERON:0002405!7.71e-31!115;UBERON:0007023!1.17e-17!115;UBERON:0003081!5.58e-16!216;UBERON:0002204!5.84e-15!167;UBERON:0001049!3.18e-11!57;UBERON:0005068!3.18e-11!57;UBERON:0006241!3.18e-11!57;UBERON:0007135!3.18e-11!57;UBERON:0000178!4.32e-10!15;UBERON:0000179!4.32e-10!15;UBERON:0000463!4.32e-10!15;UBERON:0002616!8.54e-09!59;UBERON:0003080!2.10e-08!42;UBERON:0002780!1.10e-07!41;UBERON:0001890!1.10e-07!41;UBERON:0006240!1.10e-07!41;UBERON:0002298!2.98e-07!8;UBERON:0000955!4.85e-07!69;UBERON:0006238!4.85e-07!69;UBERON:0001893!5.29e-07!34;UBERON:0002020!7.06e-07!34;UBERON:0003528!7.06e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.88e-14;15!UBERON:0000179;8.88e-14;15!UBERON:0000463;8.88e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.62e-89,98;UBERON:0003061,8.62e-89,98;UBERON:0002371,3.12e-82,76;UBERON:0002193,1.99e-79,108;UBERON:0001474,2.10e-75,82;UBERON:0004765,1.07e-67,90;UBERON:0002405,3.80e-65,93;UBERON:0001434,8.76e-60,100;UBERON:0003081,3.15e-36,203;UBERON:0002204,4.40e-31,167;UBERON:0000926,1.19e-18,315;UBERON:0004120,1.19e-18,315;UBERON:0006603,1.19e-18,315;UBERON:0002384,1.52e-15,371;UBERON:0000178,9.04e-14,15;UBERON:0000179,9.04e-14,15;UBERON:0000463,9.04e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.53531759238885,1.85779347979291,0,0,0,0,0,0,4.9859586767869,3.40925560699241,3.90619567288533,2.91090116511902,0.971680998056939,5.15151135268373,48.1268170360359,49.501748623234,52.1555731553805,24.1726198381912,26.7259127214187,15.7950249156503,8.63077176966451,16.6504459243915,12.0605937243178,2.75796544589295,6.45484683583826,4.06279459783025,36.8954985503505,36.5694241077513,34.607416604543,25.4049630667849,30.1673285451528,24.9341479061626,36.2836430205388,52.2594782968675,40.0651265500733,3.77272010217159,5.10646702222026,3.11411124497787,9.2962006144995,15.1230046341858,15.4204079740633,6.65939452896706,6.99727508376373,6.32924774881769,1.26753171787165,1.4882300997553,1.67726916406701,7.18903239337569,7.0583139635508,4.17886525412408,0.570025487482497,0.99458338599545,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.696518949197069,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,0.936017060556951,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.07857100409308,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.55213326462519,2.29391162142713,2.84823593587081,1.90585420366231,0.411362273086194,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0.383010740264733,0.211673582723883,0,0,0,1.09675927041116,0,0,0,2.42159648629257,3.83261613921294,0,1.84344458585075,1.11838053946208,1.16794399198336,3.32159762183469,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.665574309221114,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.380494861163441,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.53531759238885,1.85779347979291,0,0,0,0,0,0,4.9859586767869,3.40925560699241,3.90619567288533,2.91090116511902,0.971680998056939,5.15151135268373,48.1268170360359,49.501748623234,52.1555731553805,24.1726198381912,26.7259127214187,15.7950249156503,8.63077176966451,16.6504459243915,12.0605937243178,2.75796544589295,6.45484683583826,4.06279459783025,36.8954985503505,36.5694241077513,34.607416604543,25.4049630667849,30.1673285451528,24.9341479061626,36.2836430205388,52.2594782968675,40.0651265500733,3.77272010217159,5.10646702222026,3.11411124497787,9.2962006144995,15.1230046341858,15.4204079740633,6.65939452896706,6.99727508376373,6.32924774881769,1.26753171787165,1.4882300997553,1.67726916406701,7.18903239337569,7.0583139635508,4.17886525412408,0.570025487482497,0.99458338599545,1.0959849225878,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.696518949197069,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,0.936017060556951,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.07857100409308,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.55213326462519,2.29391162142713,2.84823593587081,1.90585420366231,0.411362273086194,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0.383010740264733,0.211673582723883,0,0,0,1.09675927041116,0,0,0,2.42159648629257,3.83261613921294,0,1.84344458585075,1.11838053946208,1.16794399198336,3.32159762183469,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.425246896606173,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.665574309221114,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.380494861163441,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.203909198930495,0.328863867814245,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.891139200981258,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p4@IFFO1 | |short_description=p4@IFFO1 | ||
}} | }} |
Latest revision as of 00:27, 20 September 2015
Short description: | p4@IFFO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFFO1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000471408, uc001qpb.1_5end |
EntrezGene: | IFFO1 |
HGNC: | 24970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.62e-89 | 98 |
blood island | 8.62e-89 | 98 |
bone marrow | 3.12e-82 | 76 |
hemolymphoid system | 1.99e-79 | 108 |
bone element | 2.10e-75 | 82 |
skeletal element | 1.07e-67 | 90 |
immune system | 3.80e-65 | 93 |
skeletal system | 8.76e-60 | 100 |
lateral plate mesoderm | 3.15e-36 | 203 |
musculoskeletal system | 4.40e-31 | 167 |
mesoderm | 1.19e-18 | 315 |
mesoderm-derived structure | 1.19e-18 | 315 |
presumptive mesoderm | 1.19e-18 | 315 |
connective tissue | 1.52e-15 | 371 |
blood | 9.04e-14 | 15 |
haemolymphatic fluid | 9.04e-14 | 15 |
organism substance | 9.04e-14 | 15 |