FFCP PHASE1:Hg19::chrX:153210060..153210071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5973 | |EntrezGene=5973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9959 | |HGNC=9959 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471056_5end | |association_with_transcript=0bp_to_ENST00000471056_5end | ||
|cluster_id=chrX:153210060..153210071,- | |||
|coexpression_cluster_id=C4860 | |||
|description=CAGE_peak_3_at_RENBP_5end | |description=CAGE_peak_3_at_RENBP_5end | ||
|id=chrX:153210060..153210071,- | |id=chrX:153210060..153210071,- | ||
|ontology_enrichment_celltype=CL:0000557!2.40e-33!71;CL:0000839!1.99e-32!70;CL:0000766!7.14e-31!76;CL:0002194!7.41e-29!63;CL:0000576!7.41e-29!63;CL:0000040!7.41e-29!63;CL:0000559!7.41e-29!63;CL:0002009!2.02e-27!65;CL:0002057!3.23e-25!42;CL:0000860!1.26e-22!45;CL:0000763!1.38e-22!112;CL:0000049!1.38e-22!112;CL:0002031!2.98e-12!124;CL:0000738!3.86e-12!140;CL:0000147!4.57e-12!14;CL:0000148!1.45e-11!10;CL:0000541!1.45e-11!10;CL:0002087!4.35e-11!119;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0002032!1.72e-10!165;CL:0000837!1.72e-10!165;CL:0000988!4.24e-10!182;CL:0002274!3.55e-07!5;CL:0000457!3.55e-07!5;CL:0002191!3.55e-07!5;CL:0000097!3.55e-07!5;CL:0000831!3.55e-07!5;CL:0002028!3.55e-07!5 | |ontology_enrichment_celltype=CL:0000557!2.40e-33!71;CL:0000839!1.99e-32!70;CL:0000766!7.14e-31!76;CL:0002194!7.41e-29!63;CL:0000576!7.41e-29!63;CL:0000040!7.41e-29!63;CL:0000559!7.41e-29!63;CL:0002009!2.02e-27!65;CL:0002057!3.23e-25!42;CL:0000860!1.26e-22!45;CL:0000763!1.38e-22!112;CL:0000049!1.38e-22!112;CL:0002031!2.98e-12!124;CL:0000738!3.86e-12!140;CL:0000147!4.57e-12!14;CL:0000148!1.45e-11!10;CL:0000541!1.45e-11!10;CL:0002087!4.35e-11!119;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0002032!1.72e-10!165;CL:0000837!1.72e-10!165;CL:0000988!4.24e-10!182;CL:0002274!3.55e-07!5;CL:0000457!3.55e-07!5;CL:0002191!3.55e-07!5;CL:0000097!3.55e-07!5;CL:0000831!3.55e-07!5;CL:0002028!3.55e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.15e-47;39!CL:0000234;1.15e-47;39!CL:0000860;1.57e-40;33!CL:0002057;1.57e-40;33!CL:0000576;1.56e-26;48!CL:0000766;3.16e-25;69!CL:0000148;8.38e-21;10!CL:0000235;2.50e-20;6!CL:0000097;8.23e-18;5!CL:0000147;1.87e-14;14!CL:0000763;7.56e-12;100!CL:0002619;9.69e-12;3!CL:0002567;2.09e-11;3!CL:0000163;9.94e-10;9!CL:0000710;1.07e-09;20!CL:0000738;2.56e-09;136!CL:0000075;7.81e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.46e-70,67;CL:0000839,1.72e-67,66;CL:0000766,3.97e-61,72;CL:0002194,3.53e-56,59;CL:0000576,3.53e-56,59;CL:0000040,3.53e-56,59;CL:0000559,3.53e-56,59;CL:0002009,4.43e-54,61;CL:0000473,1.79e-47,48;CL:0000234,1.79e-47,48;CL:0000763,7.18e-40,108;CL:0000049,7.18e-40,108;CL:0002031,5.88e-33,120;CL:0000860,1.20e-32,42;CL:0002057,1.20e-32,42;CL:0000738,5.79e-28,136;CL:0002087,8.25e-25,115;CL:0002032,1.46e-23,161;CL:0000837,1.46e-23,161;CL:0000037,3.54e-22,168;CL:0000988,6.92e-22,177;CL:0000148,3.00e-21,10;CL:0000541,3.00e-21,10;CL:0000235,3.26e-20,6;CL:0000097,6.55e-18,5;CL:0002028,6.55e-18,5;CL:0000147,9.15e-15,14;CL:0002619,8.78e-12,3;CL:0002567,1.39e-11,3;CL:0000219,3.27e-11,386;CL:0000710,6.61e-10,20;CL:0000163,8.79e-10,9;CL:0002320,1.26e-07,361;CL:0000134,2.34e-07,354;CL:0000075,5.58e-07,27 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-24;42!CL:0000049;4.61e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.69e-28!80;UBERON:0002193!1.27e-27!112;UBERON:0002390!7.29e-26!102;UBERON:0003061!7.29e-26!102;UBERON:0002405!1.29e-25!115;UBERON:0001474!4.19e-25!86;UBERON:0004765!2.07e-19!101;UBERON:0001434!2.07e-19!101;UBERON:0007023!9.98e-10!115;UBERON:0002204!9.19e-09!167;UBERON:0003081!6.69e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.69e-28!80;UBERON:0002193!1.27e-27!112;UBERON:0002390!7.29e-26!102;UBERON:0003061!7.29e-26!102;UBERON:0002405!1.29e-25!115;UBERON:0001474!4.19e-25!86;UBERON:0004765!2.07e-19!101;UBERON:0001434!2.07e-19!101;UBERON:0007023!9.98e-10!115;UBERON:0002204!9.19e-09!167;UBERON:0003081!6.69e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-60,76;UBERON:0001474,1.63e-55,82;UBERON:0002405,4.03e-53,93;UBERON:0002390,6.90e-50,98;UBERON:0003061,6.90e-50,98;UBERON:0004765,9.52e-50,90;UBERON:0002193,1.06e-46,108;UBERON:0001434,7.97e-44,100;UBERON:0002204,2.28e-22,167;UBERON:0003081,6.53e-19,203;UBERON:0000926,6.77e-12,315;UBERON:0004120,6.77e-12,315;UBERON:0006603,6.77e-12,315;UBERON:0002384,3.70e-07,371 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,4.92614043327834,3.56283032620878,3.8636335145128,1.30858414901608,0.377875943688809,2.18325655069035,3.0215774797739,1.6446715520873,2.78735733805593,1.1507695692886,1.7931249457037,0.236482229888585,1.03423704220986,1.93645405075148,1.35426486594342,1.50593871634084,3.547779950752,2.02251136000576,1.83650335422542,1.60464513538047,1.27867425159808,0.329851300186716,1.79517291859469,1.27867425159808,0.580418477257168,1.70215567407342,0,1.25624332628372,1.5644487552606,2.17188844705117,0,0.736555271975129,0,0,0.212604299965044,0,0.44931452458598,0.300353785683013,0,0.570025487482497,0.59675003159727,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,1.62273696827342,1.21890816109487,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0.775250277507987,1.06729878806013,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21973706129595,0.530119073285941,0.69716365721711,1.45125477021519,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,5.41677413392274,2.10603838625314,2.52672975890838,0,0,0,0,0,0,1.47798971368783,4.66656700270098,4.14656231081544,3.89123874225796,2.5248486685276,1.8414389344729,4.58386110669933,9.37739577680376,1.71072446022705,2.98199728839638,3.60411669412701,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,1.37060810223918,0,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0.324621940274555,0.842391534340376,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0.404406797884062,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.134366944973453,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.854299300541557,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0.18628920882415,0,0,2.12308764558307,0.856396000634902,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.215649622793364,0.786329709279482,0,0,0.212574920101683,0.123935764259002,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.163771917510097,0,0.270150338473579,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0.266107110487916,0.230467975111559,0,0.203909198930495,0.131545547125698,0,0,0.235479278551542,0.157115589916002,0.280272163313789,0,0,0,0.285906176706625,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,1.09279780251979,0,0,0,0.196308467114945,0,0,0,0.845855261818682,1.09578409555081,0,0,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0,0,0,0,0,0.218531143927391,0.126698501011437,2.14176542458162,4.54269588951453,6.3407480679043,0,0.227336094654718,0.535928260312357,0,0.103432995861895,0.213233981900981,0,0.129177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|short_description=p3@RENBP | |short_description=p3@RENBP | ||
}} | }} |
Latest revision as of 01:22, 20 September 2015
Short description: | p3@RENBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RENBP_5end |
Coexpression cluster: | C4860_Mast_Macrophage_Monocytederived_CD14_Melanocyte_testicular_Dendritic |
Association with transcript: | 0bp_to_ENST00000471056_5end |
EntrezGene: | RENBP |
HGNC: | 9959 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-60 | 76 |
bone element | 1.63e-55 | 82 |
immune system | 4.03e-53 | 93 |
hematopoietic system | 6.90e-50 | 98 |
blood island | 6.90e-50 | 98 |
skeletal element | 9.52e-50 | 90 |
hemolymphoid system | 1.06e-46 | 108 |
skeletal system | 7.97e-44 | 100 |
musculoskeletal system | 2.28e-22 | 167 |
lateral plate mesoderm | 6.53e-19 | 203 |
mesoderm | 6.77e-12 | 315 |
mesoderm-derived structure | 6.77e-12 | 315 |
presumptive mesoderm | 6.77e-12 | 315 |
connective tissue | 3.70e-07 | 371 |