FFCP PHASE1:Hg19::chrX:153210073..153210106,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5973 | |EntrezGene=5973 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9959 | |HGNC=9959 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE83 | |UniProt=F8WE83 | ||
|association_with_transcript=0bp_to_ENST00000423624,ENST00000475904_5end | |association_with_transcript=0bp_to_ENST00000423624,ENST00000475904_5end | ||
|cluster_id=chrX:153210073..153210106,- | |||
|coexpression_cluster_id=C4860 | |coexpression_cluster_id=C4860 | ||
|description=CAGE_peak_1_at_RENBP_5end | |description=CAGE_peak_1_at_RENBP_5end | ||
|id=chrX:153210073..153210106,- | |id=chrX:153210073..153210106,- | ||
|ontology_enrichment_celltype=CL:0000766!1.21e-33!76;CL:0000763!2.43e-31!112;CL:0000049!2.43e-31!112;CL:0000557!4.03e-30!71;CL:0000839!6.11e-30!70;CL:0002194!1.34e-26!63;CL:0000576!1.34e-26!63;CL:0000040!1.34e-26!63;CL:0000559!1.34e-26!63;CL:0000037!1.40e-26!172;CL:0000566!1.40e-26!172;CL:0002009!1.74e-26!65;CL:0002032!9.18e-26!165;CL:0000837!9.18e-26!165;CL:0000738!2.84e-25!140;CL:0000988!2.96e-25!182;CL:0002057!8.26e-25!42;CL:0002031!1.96e-21!124;CL:0000860!2.24e-21!45;CL:0002087!1.81e-19!119;CL:0000148!2.05e-07!10;CL:0000541!2.05e-07!10;CL:0000147!4.61e-07!14 | |ontology_enrichment_celltype=CL:0000766!1.21e-33!76;CL:0000763!2.43e-31!112;CL:0000049!2.43e-31!112;CL:0000557!4.03e-30!71;CL:0000839!6.11e-30!70;CL:0002194!1.34e-26!63;CL:0000576!1.34e-26!63;CL:0000040!1.34e-26!63;CL:0000559!1.34e-26!63;CL:0000037!1.40e-26!172;CL:0000566!1.40e-26!172;CL:0002009!1.74e-26!65;CL:0002032!9.18e-26!165;CL:0000837!9.18e-26!165;CL:0000738!2.84e-25!140;CL:0000988!2.96e-25!182;CL:0002057!8.26e-25!42;CL:0002031!1.96e-21!124;CL:0000860!2.24e-21!45;CL:0002087!1.81e-19!119;CL:0000148!2.05e-07!10;CL:0000541!2.05e-07!10;CL:0000147!4.61e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.16e-21;39!CL:0000234;8.16e-21;39!CL:0000860;2.70e-20;33!CL:0002057;2.70e-20;33!CL:0000576;1.91e-19;48!CL:0000766;6.29e-18;69!CL:0000763;4.30e-12;100!CL:0000148;4.19e-08;10!CL:0000147;6.67e-08;14!CL:0000738;2.60e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.26e-42,72;CL:0000557,1.44e-38,67;CL:0000839,2.13e-38,66;CL:0000763,2.75e-38,108;CL:0000049,2.75e-38,108;CL:0002194,1.18e-34,59;CL:0000576,1.18e-34,59;CL:0000040,1.18e-34,59;CL:0000559,1.18e-34,59;CL:0002009,2.14e-34,61;CL:0000473,4.97e-32,48;CL:0000234,4.97e-32,48;CL:0000037,5.85e-30,168;CL:0002032,3.58e-29,161;CL:0000837,3.58e-29,161;CL:0000738,7.04e-29,136;CL:0000988,8.17e-29,177;CL:0000860,2.26e-27,42;CL:0002057,2.26e-27,42;CL:0002031,1.07e-24,120;CL:0002087,1.80e-22,115;CL:0000148,4.64e-08,10;CL:0000541,4.64e-08,10;CL:0000147,6.82e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.69e-20;42!CL:0000049;2.83e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.23e-28!112;UBERON:0002390!1.08e-27!102;UBERON:0003061!1.08e-27!102;UBERON:0002371!5.81e-25!80;UBERON:0002405!4.11e-21!115;UBERON:0001474!6.82e-21!86;UBERON:0007023!1.47e-20!115;UBERON:0004765!4.39e-15!101;UBERON:0001434!4.39e-15!101;UBERON:0003081!3.26e-08!216;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0005743!4.83e-07!86 | |ontology_enrichment_uberon=UBERON:0002193!1.23e-28!112;UBERON:0002390!1.08e-27!102;UBERON:0003061!1.08e-27!102;UBERON:0002371!5.81e-25!80;UBERON:0002405!4.11e-21!115;UBERON:0001474!6.82e-21!86;UBERON:0007023!1.47e-20!115;UBERON:0004765!4.39e-15!101;UBERON:0001434!4.39e-15!101;UBERON:0003081!3.26e-08!216;UBERON:0001049!1.20e-07!57;UBERON:0005068!1.20e-07!57;UBERON:0006241!1.20e-07!57;UBERON:0007135!1.20e-07!57;UBERON:0005743!4.83e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.69e-35,108;UBERON:0002390,1.36e-33,98;UBERON:0003061,1.36e-33,98;UBERON:0002405,2.66e-32,93;UBERON:0002371,9.90e-31,76;UBERON:0001474,7.42e-26,82;UBERON:0007023,1.47e-22,114;UBERON:0004765,1.54e-20,90;UBERON:0001434,8.03e-17,100;UBERON:0003081,1.67e-09,203;UBERON:0001049,1.75e-07,56;UBERON:0005068,1.75e-07,56;UBERON:0006241,1.75e-07,56;UBERON:0007135,1.75e-07,56 | |||
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|phase1_expression=3.63356758541113,2.35510576280081,2.25527046553554,0,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0,0,2.09340350391728,0.218441372130172,0,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.229240217243854,0.0821005894499457,0.236132343941038,13.7677496897116,6.1412703695554,7.7408061658038,0,0,0,0,0,4.9912074686924,12.1878989877013,9.02450013615638,8.68043482863407,84.8639647369313,56.6813915533214,72.8938856404748,31.406019576386,27.5849438892831,27.4119989142232,30.4482038346447,29.1929200495496,29.1123988641397,23.015391385772,21.2613386419154,16.553756092201,18.961012440514,9.68227025375739,18.9597081232078,28.0481085918481,30.5654888064787,31.6860113067569,23.5684597125595,26.3161802202397,15.983428144976,18.8015241106428,25.3318845179472,20.0325632750366,17.7027635563436,20.425868088881,11.2108004819203,26.1298611867013,18.7733850631273,17.3751075764093,15.7403870684676,14.7311054395026,15.8231193720442,21.5480392038181,23.3864729961548,22.852792360413,15.5013510982163,16.3692813197242,13.1794981091606,26.5061851679361,22.079751169099,12.6038266097597,7.03984977845291,6.55366333514558,5.33705552318133,7.25441378363062,4.80475184443215,3.4485146397269,7.27149360063348,5.72432252721218,2.27685187643779,1.17447437874188,2.29363936875137,5.28685314316103,2.24203425192614,5.00429761072646,2.55722701147983,0,2.2616164889946,12.2046141635195,3.58514493296949,5.6813736688168,3.89653456815823,6.23898558556972,2.94605907474837,3.54454231333794,1.62482318259009,16.5237802446121,12.3556380181884,7.72858151637278,5.25065033793112,6.66547097190621,3.11401782640327,4.54819407752512,5.22677619024884,5.21222976408804,1.91610246800961,3.4362744548263,2.27717722817553,3.82278497188916,1.95325036156926,2.85135613334512,1.95747654801105,1.15187950038977,3.74792179657038,4.73554504088034,1.64225599384209,0.403213486449465,0.534880391567015,1.59306844271079,4.87613732627923,0,0.12786256184353,0,0,1.30361867064741,0,0.486634870302636,1.03988298880475,0.443458794925128,0.790513071238134,12.2465435590361,0,0,41.8666137814541,37.4378935193425,39.3555563135841,3.81584998888547,9.15191857248205,0.371457501329565,1.78886166630035,0.860234595106124,0.347140501607594,0.56530794192401,1.67799774483962,0.825354125820202,0.417989933073621,11.1119206442811,11.3845204059747,3.3472061276467,2.01414658554573,0.760272105718513,3.1728067481262,0.367663080345869,0,1.07159673940896,1.34717623575702,1.80178368773316,0,0,0.366403487860815,19.7670626154095,19.3890132074163,0,0,0,3.44263870114369,0,0.354668382198357,0,0,2.22000793575444,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0.468642863667593,1.5608003841516,0,2.69007624993242,0,0,0,0.204154171254893,0.122834317311768,1.34323515528495,1.18800285728205,2.47266929278557,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.612975591598039,4.05642759047811,0.113432183160021,0.179389635688862,0.213557388818567,0,0.900273288253207,0,0.515281080091258,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0,0,17.8081610949209,6.36142887943129,11.1546185154738,18.0370235726745,15.1392510525377,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11971000087113,1.40241773803446,0,0,0,0.982827216677626,5.90789906681404,0,3.44367627920718,0,0.109750285408626,0,0,0.185176890317059,1.95484983186195,0,0,4.86907700895323,0.234817388471643,6.78522304477047,6.01881166349594,6.27838702374174,0,0,85.6835181184143,34.3986269754679,55.2907923714069,0,0,0,0,0,0.383382679165211,14.7798971368783,51.9485760678034,100.346807921734,107.369365295636,96.9541888714598,26.2246303426658,46.2205994925516,78.5356896307315,41.0573870454493,24.164460785281,26.1298460324208,22.8661146104463,0.336393253036082,0,0.22001485746285,0.129271715757778,10.7296933755565,1.690605505112,3.45719551560332,5.2003718455683,0.514414748524284,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,82.7041708360095,62.7821364290158,29.5167515276244,2.63587341040741,0,0,1.88215698667853,0.205476322550383,1.25342674267927,2.24170287987055,1.77327684181734,0.862510299438069,0.898401253958239,2.28685161800217,3.90419561572865,2.31986643833309,4.02039036802437,0.637938751653163,8.23907726341901,17.9496875522415,7.0450637284126,0,0,0,0,0.178428988797162,0.157702415033935,0,1.50473049863859,9.09630016223939,6.2083842775503,0,0,0.347534457872331,8.41944977089785,2.05886054286514,5.16920065307218,9.49142483601914,5.76328812138599,1.5156378572313,0,0.604780586659361,1.73675465473144,2.76231551918512,1.68396056659844,1.66580894032411,3.07024349440022,0.482561763430822,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.464841513839837,1.32945394550784,0,0.368323955743585,0,0,1.57349297951309,1.80479845162965,2.00239876471478,0.784349769176855,0,0.422206515571503,2.27466768141793,3.2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| ||
|short_description=p1@RENBP | |short_description=p1@RENBP | ||
}} | }} |
Latest revision as of 01:24, 20 September 2015
Short description: | p1@RENBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RENBP_5end |
Coexpression cluster: | C4860_Mast_Macrophage_Monocytederived_CD14_Melanocyte_testicular_Dendritic |
Association with transcript: | 0bp_to_ENST00000423624, ENST00000475904_5end |
EntrezGene: | RENBP |
HGNC: | 9959 |
UniProt: | F8WE83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.26e-42 | 72 |
granulocyte monocyte progenitor cell | 1.44e-38 | 67 |
myeloid lineage restricted progenitor cell | 2.13e-38 | 66 |
myeloid cell | 2.75e-38 | 108 |
common myeloid progenitor | 2.75e-38 | 108 |
monopoietic cell | 1.18e-34 | 59 |
monocyte | 1.18e-34 | 59 |
monoblast | 1.18e-34 | 59 |
promonocyte | 1.18e-34 | 59 |
macrophage dendritic cell progenitor | 2.14e-34 | 61 |
defensive cell | 4.97e-32 | 48 |
phagocyte | 4.97e-32 | 48 |
hematopoietic stem cell | 5.85e-30 | 168 |
hematopoietic oligopotent progenitor cell | 3.58e-29 | 161 |
hematopoietic multipotent progenitor cell | 3.58e-29 | 161 |
leukocyte | 7.04e-29 | 136 |
hematopoietic cell | 8.17e-29 | 177 |
classical monocyte | 2.26e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-27 | 42 |
hematopoietic lineage restricted progenitor cell | 1.07e-24 | 120 |
nongranular leukocyte | 1.80e-22 | 115 |
melanocyte | 4.64e-08 | 10 |
melanoblast | 4.64e-08 | 10 |
pigment cell | 6.82e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.69e-35 | 108 |
hematopoietic system | 1.36e-33 | 98 |
blood island | 1.36e-33 | 98 |
immune system | 2.66e-32 | 93 |
bone marrow | 9.90e-31 | 76 |
bone element | 7.42e-26 | 82 |
adult organism | 1.47e-22 | 114 |
skeletal element | 1.54e-20 | 90 |
skeletal system | 8.03e-17 | 100 |
lateral plate mesoderm | 1.67e-09 | 203 |
neural tube | 1.75e-07 | 56 |
neural rod | 1.75e-07 | 56 |
future spinal cord | 1.75e-07 | 56 |
neural keel | 1.75e-07 | 56 |