FFCP PHASE1:Hg19::chr19:56152361..56152434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51157 | |EntrezGene=51157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29473 | |HGNC=29473 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK33 | |UniProt=Q9UK33 | ||
|association_with_transcript=0bp_to_ENST00000325333,NM_207115,uc002qlo.2_5end | |association_with_transcript=0bp_to_ENST00000325333,NM_207115,uc002qlo.2_5end | ||
|cluster_id=chr19:56152361..56152434,+ | |||
|description=CAGE_peak_1_at_ZNF580_5end | |description=CAGE_peak_1_at_ZNF580_5end | ||
|id=chr19:56152361..56152434,+ | |id=chr19:56152361..56152434,+ | ||
|ontology_enrichment_celltype=CL:0000220!5.48e-08!246;CL:0002321!1.32e-07!248;CL:0000055!3.51e-07!180;CL:0000183!9.12e-07!59 | |ontology_enrichment_celltype=CL:0000220!5.48e-08!246;CL:0002321!1.32e-07!248;CL:0000055!3.51e-07!180;CL:0000183!9.12e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.73e-08,250;CL:0000222,5.83e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.55e-17!365;UBERON:0000119!3.33e-17!312;UBERON:0000481!9.35e-17!347;UBERON:0000483!2.27e-16!309;UBERON:0000477!1.53e-15!286;UBERON:0000924!8.01e-13!173;UBERON:0006601!8.01e-13!173;UBERON:0000025!4.55e-12!194;UBERON:0004121!5.11e-12!169;UBERON:0000064!9.57e-12!219;UBERON:0004111!1.40e-11!241;UBERON:0002346!3.03e-10!90;UBERON:0000033!5.13e-10!123;UBERON:0000153!1.16e-09!129;UBERON:0007811!1.16e-09!129;UBERON:0002049!1.34e-09!79;UBERON:0007798!1.34e-09!79;UBERON:0003075!2.01e-09!86;UBERON:0007284!2.01e-09!86;UBERON:0000468!2.86e-09!659;UBERON:0004872!9.85e-09!84;UBERON:0002050!1.05e-08!605;UBERON:0005423!1.05e-08!605;UBERON:0000923!1.83e-08!604;UBERON:0005291!1.83e-08!604;UBERON:0006598!1.83e-08!604;UBERON:0002532!1.83e-08!604;UBERON:0000922!1.90e-08!612;UBERON:0000055!4.92e-08!69;UBERON:0005743!7.10e-08!86;UBERON:0002100!7.60e-08!216;UBERON:0001981!9.09e-08!60;UBERON:0007500!9.09e-08!60;UBERON:0004537!9.09e-08!60;UBERON:0006965!9.09e-08!60;UBERON:0000073!1.20e-07!94;UBERON:0001016!1.20e-07!94;UBERON:0001017!2.41e-07!82;UBERON:0003056!2.93e-07!61;UBERON:0003914!3.23e-07!118;UBERON:0000955!3.49e-07!69;UBERON:0006238!3.49e-07!69;UBERON:0000480!4.48e-07!626;UBERON:0000467!4.94e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.03e-16,309;UBERON:0000483,6.83e-16,306;UBERON:0004121,1.89e-12,171;UBERON:0000924,1.89e-12,171;UBERON:0006601,1.89e-12,171;UBERON:0000025,9.13e-12,192;UBERON:0004111,1.66e-11,240;UBERON:0010314,5.04e-11,132;UBERON:0002346,9.08e-10,86;UBERON:0002049,1.72e-09,78;UBERON:0007798,1.72e-09,78;UBERON:0003075,5.93e-09,82;UBERON:0007284,5.93e-09,82;UBERON:0010371,6.60e-09,104;UBERON:0004872,1.26e-08,83;UBERON:0005423,3.25e-08,581;UBERON:0000055,6.26e-08,68;UBERON:0007500,1.15e-07,59;UBERON:0001981,1.15e-07,59;UBERON:0004537,1.15e-07,59;UBERON:0006965,1.15e-07,59;UBERON:0011216,1.19e-07,223;UBERON:0000922,1.22e-07,592;UBERON:0003104,1.32e-07,160;UBERON:0009142,1.32e-07,160;UBERON:0003056,2.49e-07,61;UBERON:0001017,2.95e-07,81;UBERON:0000955,4.27e-07,68;UBERON:0006238,4.27e-07,68;UBERON:0003914,4.83e-07,117;UBERON:0001016,4.86e-07,89;UBERON:0005085,6.88e-07,31 | |||
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| ||
|short_description=p1@ZNF580 | |short_description=p1@ZNF580 | ||
}} | }} |
Latest revision as of 02:55, 20 September 2015
Short description: | p1@ZNF580 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF580_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325333, NM_207115, uc002qlo.2_5end |
EntrezGene: | ZNF580 |
HGNC: | 29473 |
UniProt: | Q9UK33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.73e-08 | 250 |
mesodermal cell | 5.83e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.03e-16 | 309 |
epithelium | 6.83e-16 | 306 |
ectoderm-derived structure | 1.89e-12 | 171 |
ectoderm | 1.89e-12 | 171 |
presumptive ectoderm | 1.89e-12 | 171 |
tube | 9.13e-12 | 192 |
anatomical conduit | 1.66e-11 | 240 |
structure with developmental contribution from neural crest | 5.04e-11 | 132 |
neurectoderm | 9.08e-10 | 86 |
vasculature | 1.72e-09 | 78 |
vascular system | 1.72e-09 | 78 |
neural plate | 5.93e-09 | 82 |
presumptive neural plate | 5.93e-09 | 82 |
ecto-epithelium | 6.60e-09 | 104 |
splanchnic layer of lateral plate mesoderm | 1.26e-08 | 83 |
developing anatomical structure | 3.25e-08 | 581 |
vessel | 6.26e-08 | 68 |
epithelial tube open at both ends | 1.15e-07 | 59 |
blood vessel | 1.15e-07 | 59 |
blood vasculature | 1.15e-07 | 59 |
vascular cord | 1.15e-07 | 59 |
organ system subdivision | 1.19e-07 | 223 |
embryo | 1.22e-07 | 592 |
mesenchyme | 1.32e-07 | 160 |
entire embryonic mesenchyme | 1.32e-07 | 160 |
pre-chordal neural plate | 2.49e-07 | 61 |
central nervous system | 2.95e-07 | 81 |
brain | 4.27e-07 | 68 |
future brain | 4.27e-07 | 68 |
epithelial tube | 4.83e-07 | 117 |
nervous system | 4.86e-07 | 89 |
ectodermal placode | 6.88e-07 | 31 |