FFCP PHASE1:Hg19::chr1:205819253..205819272,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:205819253..205819272,-
|short_description=p1@PM20D1
|description=CAGE_peak_1_at_PM20D1_5end
|association_with_transcript=0bp_to_ENST00000460624_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148811 | |EntrezGene=148811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26518 | |HGNC=26518 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460624_5end | |||
|cluster_id=chr1:205819253..205819272,- | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_1_at_PM20D1_5end | |||
|id=chr1:205819253..205819272,- | |||
|ontology_enrichment_celltype=CL:0002087!2.13e-18!119;CL:0002031!8.07e-18!124;CL:0000838!7.62e-17!52;CL:0000738!2.31e-16!140;CL:0000542!2.88e-16!53;CL:0000051!2.88e-16!53;CL:0000791!4.45e-14!18;CL:0000789!4.45e-14!18;CL:0002420!4.45e-14!18;CL:0002419!4.45e-14!18;CL:0000790!4.45e-14!18;CL:0000037!1.93e-13!172;CL:0000566!1.93e-13!172;CL:0002032!2.89e-13!165;CL:0000837!2.89e-13!165;CL:0000988!2.50e-12!182;CL:0000084!2.27e-10!25;CL:0000827!2.27e-10!25;CL:0000625!7.56e-09!11;CL:0000860!1.24e-08!45;CL:0002057!1.49e-08!42;CL:0000236!4.60e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-24;33!CL:0002057;3.31e-24;33!CL:0000791;3.26e-18;18!CL:0000789;3.26e-18;18!CL:0002419;3.26e-18;18!CL:0000473;1.93e-15;39!CL:0000234;1.93e-15;39!CL:0000625;7.98e-14;11!CL:0000084;2.48e-12;25!CL:0000542;4.92e-11;53!CL:0000576;1.09e-10;48!CL:0002087;1.51e-10;104!CL:0000898;2.67e-08;3!CL:0000766;3.87e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,9.02e-28,120;CL:0002087,2.91e-26,115;CL:0000738,3.31e-23,136;CL:0000860,7.38e-21,42;CL:0002057,7.38e-21,42;CL:0002032,3.93e-19,161;CL:0000837,3.93e-19,161;CL:0000791,1.81e-18,18;CL:0000789,1.81e-18,18;CL:0002420,1.81e-18,18;CL:0002419,1.81e-18,18;CL:0000790,1.81e-18,18;CL:0000037,7.10e-18,168;CL:0000473,1.46e-17,48;CL:0000234,1.46e-17,48;CL:0000988,2.08e-16,177;CL:0000838,7.12e-15,52;CL:0000542,1.70e-14,53;CL:0000051,1.70e-14,53;CL:0000625,6.66e-14,11;CL:0000839,1.04e-13,66;CL:0000557,2.00e-13,67;CL:0002194,5.57e-13,59;CL:0000576,5.57e-13,59;CL:0000040,5.57e-13,59;CL:0000559,5.57e-13,59;CL:0000084,1.65e-12,25;CL:0000827,1.65e-12,25;CL:0002009,2.15e-12,61;CL:0000766,4.11e-12,72;CL:0000898,1.31e-08,3;CL:0000763,3.59e-07,108;CL:0000049,3.59e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;3.26e-18;18!CL:0002057;5.87e-16;42!CL:0000051;4.92e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.98e-19!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-12,98;UBERON:0003061,1.04e-12,98;UBERON:0002405,2.66e-11,93;UBERON:0002371,3.43e-11,76;UBERON:0002193,6.58e-11,108;UBERON:0001474,5.55e-10,82;UBERON:0004765,1.25e-08,90;UBERON:0001434,2.91e-07,100 | |||
|phase1_expression=0.726713517082227,0.642301571672949,10.8534891153898,3.00219895059391,0,0,0,6.31719873426831,22.4619640251861,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,2.40148321798935,0.142169232487422,0,0,1.00272223735071,0.217010870715852,0,0.32389366601898,0,0,1.13362783106643,2.42584061187816,0,3.70051099219643,4.64559556342655,0,1.5369642391746,1.41889337933151,0,5.80936215225443,6.77132432971709,0,1.63743690034707,2.02251136000576,0,2.88836124368484,6.39337125799041,0,1.19678194572979,0.852449501065388,0,6.24123747160254,8.71951148593805,0,2.60741459210101,2.6062661364614,0,11.4166067156145,6.0127853613768,0.211255286311942,0,0.209658645508376,0,0,0,0,0,0,0,1.09227722252426,2.66852776159066,0.853460445133014,0.800791974072025,1.72425731986345,0.661044872784862,0,1.1384259382189,0.587237189370939,1.91136614062614,0,0.560508562981536,0.263384084775077,0.393419540227666,0.393010762749165,0.822405995998037,2.00623794468814,1.95553359980154,0.473447805734733,1.94826728407911,1.6711568532776,2.94605907474837,1.32920336750173,1.89562704635511,0.768547918354051,1.56071217071854,0.822189523018381,0,0,0.889719378972363,0.535081656179426,1.04535523804977,0.566546713487831,1.53288197440768,0.68725489096526,1.26509846009751,0.95569624297229,1.95325036156926,3.8018081777935,0.903450714466637,1.02389288923535,2.49861453104692,2.13099526839615,1.64225599384209,0,1.33720097891754,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0,0.427114777637135,0.423863802319124,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,1.72943944100354,1.13618190083742,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,4.37132061574756,0.197030760201927,1.94064817373566,3.33691894327346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0.512556597022804,0.511707249066704,0,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,4.5571774973933,0.476463550915578,0.822724546172388,2.59389324477087,0.540031437238115,0,0,0,0,0,0.432807638929335,0,0,0,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,3.09154810280188,0,0,0,0,0.278406173895242,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0.511572370226872,0.295930216910801,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635746315921515,0,0,0.282706142867882,0,0,0.265372693510018,0,0,0,0,1.14581926067151,0.802577647298789,0,0.91227394607833,0,0,0.789168805698781,4.83962864194656,0,0.379119477770928,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0.587954384486266,0,0.52418000472609,0,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,2.52076466412852,0,0.798716001995964,1.71690419254628,0.446342914883745,1.00775208730089,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0,0,0,0.364497339948148,0,3.94028536495991,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0.992332043623902,1.18566979138767,0.487170393523584,0,0,0,0,2.29510841496863,0,0,0,0.500763722825999,1.14681839138014,0.332787154610557,1.05563885000352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,1.02520268501629,0,0,0,0.385375350578757,1.41696576325585,0.319267718114302,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.601682626794058,0,197.723044841972,0,0,0.443568258651136,0.540300676947157,0,0.413373593002368,0.380494861163441,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0.135939465953663,0.394636641377094,0,0,1.96232732126285,0.157115589916002,0,0,0,0,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| ||
|short_description=p1@PM20D1 | |||
}} | }} |
Latest revision as of 04:07, 20 September 2015
Short description: | p1@PM20D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PM20D1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000460624_5end |
EntrezGene: | PM20D1 |
HGNC: | 26518 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-12 | 98 |
blood island | 1.04e-12 | 98 |
immune system | 2.66e-11 | 93 |
bone marrow | 3.43e-11 | 76 |
hemolymphoid system | 6.58e-11 | 108 |
bone element | 5.55e-10 | 82 |
skeletal element | 1.25e-08 | 90 |
skeletal system | 2.91e-07 | 100 |