FFCP PHASE1:Hg19::chrX:154033686..154033783,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:154033686..154033783,-
|short_description=p1@MPP1
|description=CAGE_peak_1_at_MPP1_5end
|association_with_transcript=0bp_to_ENST00000369531,ENST00000428488...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4354 | |EntrezGene=4354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7219 | |HGNC=7219 | ||
|TSSclassifier=strong | |||
|UniProt=A6NFY0,C9JB34,F8WC84,C9J9J4,Q00013,A8MTH1,Q2TSB6 | |UniProt=A6NFY0,C9JB34,F8WC84,C9J9J4,Q00013,A8MTH1,Q2TSB6 | ||
|association_with_transcript=0bp_to_ENST00000369531,ENST00000428488,ENST00000439370,ENST00000453245,ENST00000471821,ENST00000475943,ENST00000494170,uc004fmp.1,uc004fmq.1,uc010nvg.1,uc010nvh.1,uc011mzv.1,uc011mzw.1_5end | |||
|cluster_id=chrX:154033686..154033783,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MPP1_5end | |||
|id=chrX:154033686..154033783,- | |||
|ontology_enrichment_celltype=CL:0000763!4.17e-42!112;CL:0000049!4.17e-42!112;CL:0000766!5.79e-33!76;CL:0000839!8.72e-30!70;CL:0000557!1.06e-26!71;CL:0002194!1.41e-25!63;CL:0000576!1.41e-25!63;CL:0000040!1.41e-25!63;CL:0000559!1.41e-25!63;CL:0002057!1.82e-24!42;CL:0002009!1.70e-23!65;CL:0000860!1.02e-20!45;CL:0000037!1.39e-18!172;CL:0000566!1.39e-18!172;CL:0002032!7.17e-17!165;CL:0000837!7.17e-17!165;CL:0000988!2.74e-15!182;CL:0000738!4.97e-09!140;CL:0000048!2.38e-08!430;CL:0000134!2.62e-08!358;CL:0000034!1.06e-07!444;CL:0000723!1.43e-07!436;CL:0002320!2.07e-07!365;CL:0002031!5.00e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.22e-18;39!CL:0000234;1.22e-18;39!CL:0000860;1.24e-18;33!CL:0002057;1.24e-18;33!CL:0000576;2.83e-17;48!CL:0000766;5.32e-16;69!CL:0000763;4.04e-15;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.76e-46,108;CL:0000049,3.76e-46,108;CL:0000766,1.80e-37,72;CL:0000839,3.03e-34,66;CL:0000557,8.62e-31,67;CL:0002194,6.65e-30,59;CL:0000576,6.65e-30,59;CL:0000040,6.65e-30,59;CL:0000559,6.65e-30,59;CL:0000473,4.41e-28,48;CL:0000234,4.41e-28,48;CL:0002009,1.75e-27,61;CL:0000860,1.82e-24,42;CL:0002057,1.82e-24,42;CL:0000037,2.01e-20,168;CL:0002032,1.20e-18,161;CL:0000837,1.20e-18,161;CL:0000988,1.06e-16,177;CL:0000738,2.44e-10,136;CL:0000134,8.21e-09,354;CL:0000048,1.14e-08,427;CL:0002031,3.24e-08,120;CL:0000034,5.27e-08,441;CL:0002320,7.08e-08,361;CL:0000723,7.16e-08,433;CL:0002087,3.52e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.44e-18;42!CL:0000049;2.89e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!6.51e-12!31;DOID:1240!1.03e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-11;31!DOID:1240;1.21e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.49e-12,31;DOID:1240,1.03e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.45e-30!112;UBERON:0002390!3.55e-28!102;UBERON:0003061!3.55e-28!102;UBERON:0002405!1.49e-24!115;UBERON:0002371!3.48e-24!80;UBERON:0003081!7.48e-22!216;UBERON:0001474!1.68e-21!86;UBERON:0007023!6.48e-18!115;UBERON:0004765!7.41e-17!101;UBERON:0001434!7.41e-17!101;UBERON:0002204!1.19e-13!167;UBERON:0002384!3.63e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.22e-33,108;UBERON:0002390,1.52e-31,98;UBERON:0003061,1.52e-31,98;UBERON:0002405,1.39e-29,93;UBERON:0002371,1.08e-27,76;UBERON:0003081,3.48e-26,203;UBERON:0001474,1.40e-24,82;UBERON:0004765,5.85e-20,90;UBERON:0001434,4.22e-18,100;UBERON:0007023,1.26e-17,114;UBERON:0000926,3.03e-15,315;UBERON:0004120,3.03e-15,315;UBERON:0006603,3.03e-15,315;UBERON:0002204,3.42e-14,167;UBERON:0000479,3.62e-08,773;UBERON:0002384,1.28e-07,371 | |||
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| ||
|short_description=p1@MPP1 | |||
}} | }} |
Latest revision as of 04:28, 20 September 2015
Short description: | p1@MPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPP1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000369531, ENST00000428488, ENST00000439370, ENST00000453245, ENST00000471821, ENST00000475943, ENST00000494170, uc004fmp.1, uc004fmq.1, uc010nvg.1, uc010nvh.1, uc011mzv.1, uc011mzw.1_5end |
EntrezGene: | MPP1 |
HGNC: | 7219 |
UniProt: | A6NFY0C9JB34F8WC84C9J9J4Q00013A8MTH1Q2TSB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.76e-46 | 108 |
common myeloid progenitor | 3.76e-46 | 108 |
myeloid leukocyte | 1.80e-37 | 72 |
myeloid lineage restricted progenitor cell | 3.03e-34 | 66 |
granulocyte monocyte progenitor cell | 8.62e-31 | 67 |
monopoietic cell | 6.65e-30 | 59 |
monocyte | 6.65e-30 | 59 |
monoblast | 6.65e-30 | 59 |
promonocyte | 6.65e-30 | 59 |
defensive cell | 4.41e-28 | 48 |
phagocyte | 4.41e-28 | 48 |
macrophage dendritic cell progenitor | 1.75e-27 | 61 |
classical monocyte | 1.82e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-24 | 42 |
hematopoietic stem cell | 2.01e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.20e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-18 | 161 |
hematopoietic cell | 1.06e-16 | 177 |
leukocyte | 2.44e-10 | 136 |
mesenchymal cell | 8.21e-09 | 354 |
multi fate stem cell | 1.14e-08 | 427 |
hematopoietic lineage restricted progenitor cell | 3.24e-08 | 120 |
stem cell | 5.27e-08 | 441 |
connective tissue cell | 7.08e-08 | 361 |
somatic stem cell | 7.16e-08 | 433 |
nongranular leukocyte | 3.52e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.22e-33 | 108 |
hematopoietic system | 1.52e-31 | 98 |
blood island | 1.52e-31 | 98 |
immune system | 1.39e-29 | 93 |
bone marrow | 1.08e-27 | 76 |
lateral plate mesoderm | 3.48e-26 | 203 |
bone element | 1.40e-24 | 82 |
skeletal element | 5.85e-20 | 90 |
skeletal system | 4.22e-18 | 100 |
adult organism | 1.26e-17 | 114 |
mesoderm | 3.03e-15 | 315 |
mesoderm-derived structure | 3.03e-15 | 315 |
presumptive mesoderm | 3.03e-15 | 315 |
musculoskeletal system | 3.42e-14 | 167 |
tissue | 3.62e-08 | 773 |
connective tissue | 1.28e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.49e-12 | 31 |
leukemia | 1.03e-10 | 39 |