FFCP PHASE1:Hg19::chr6:99848993..99849028,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |UniProt=Q8TF01 | ||
|association_with_transcript=-138bp_to_AF161379_5end | |association_with_transcript=-138bp_to_AF161379_5end | ||
|cluster_id=chr6:99848993..99849028,- | |||
|coexpression_cluster_id=C905 | |||
|description=CAGE_peak_9_at_PNISR_5end | |description=CAGE_peak_9_at_PNISR_5end | ||
|id=chr6:99848993..99849028,- | |id=chr6:99848993..99849028,- | ||
|ontology_enrichment_celltype=CL:0002032!7.23e-07!165;CL:0000837!7.23e-07!165 | |ontology_enrichment_celltype=CL:0002032!7.23e-07!165;CL:0000837!7.23e-07!165 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.95e-11!235;DOID:14566!2.58e-10!239 | |ontology_enrichment_disease=DOID:162!4.95e-11!235;DOID:14566!2.58e-10!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.93e-09!57;UBERON:0005068!2.93e-09!57;UBERON:0006241!2.93e-09!57;UBERON:0007135!2.93e-09!57;UBERON:0002780!6.33e-08!41;UBERON:0001890!6.33e-08!41;UBERON:0006240!6.33e-08!41;UBERON:0007023!1.82e-07!115;UBERON:0003080!2.38e-07!42 | |ontology_enrichment_uberon=UBERON:0001049!2.93e-09!57;UBERON:0005068!2.93e-09!57;UBERON:0006241!2.93e-09!57;UBERON:0007135!2.93e-09!57;UBERON:0002780!6.33e-08!41;UBERON:0001890!6.33e-08!41;UBERON:0006240!6.33e-08!41;UBERON:0007023!1.82e-07!115;UBERON:0003080!2.38e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.36e-08;53!UBERON:0002616;4.36e-08;53!UBERON:0002780;1.92e-07;41!UBERON:0001890;1.92e-07;41!UBERON:0003528;4.16e-07;34!UBERON:0002020;4.16e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.63e-14,56;UBERON:0005068,2.63e-14,56;UBERON:0006241,2.63e-14,56;UBERON:0007135,2.63e-14,56;UBERON:0000073,1.69e-12,53;UBERON:0002616,1.69e-12,53;UBERON:0002346,1.27e-10,86;UBERON:0003075,3.10e-10,82;UBERON:0007284,3.10e-10,82;UBERON:0002780,3.40e-10,41;UBERON:0001890,3.40e-10,41;UBERON:0003080,3.40e-10,41;UBERON:0006240,3.40e-10,41;UBERON:0000955,1.58e-09,68;UBERON:0006238,1.58e-09,68;UBERON:0001016,3.96e-09,89;UBERON:0001017,6.25e-09,81;UBERON:0003528,9.10e-09,34;UBERON:0002020,9.10e-09,34;UBERON:0002791,1.12e-07,32;UBERON:0010371,3.71e-07,104;UBERON:0001893,6.61e-07,34 | |||
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| ||
|short_description=p9@PNISR | |short_description=p9@PNISR | ||
}} | }} |
Latest revision as of 06:15, 20 September 2015
Short description: | p9@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PNISR_5end |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | -138bp_to_AF161379_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.63e-14 | 56 |
neural rod | 2.63e-14 | 56 |
future spinal cord | 2.63e-14 | 56 |
neural keel | 2.63e-14 | 56 |
regional part of nervous system | 1.69e-12 | 53 |
regional part of brain | 1.69e-12 | 53 |
neurectoderm | 1.27e-10 | 86 |
neural plate | 3.10e-10 | 82 |
presumptive neural plate | 3.10e-10 | 82 |
regional part of forebrain | 3.40e-10 | 41 |
forebrain | 3.40e-10 | 41 |
anterior neural tube | 3.40e-10 | 41 |
future forebrain | 3.40e-10 | 41 |
brain | 1.58e-09 | 68 |
future brain | 1.58e-09 | 68 |
nervous system | 3.96e-09 | 89 |
central nervous system | 6.25e-09 | 81 |
brain grey matter | 9.10e-09 | 34 |
gray matter | 9.10e-09 | 34 |
regional part of telencephalon | 1.12e-07 | 32 |
ecto-epithelium | 3.71e-07 | 104 |
telencephalon | 6.61e-07 | 34 |