FFCP PHASE1:Hg19::chr5:133340611..133340676,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7416 | |EntrezGene=7416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12669 | |HGNC=12669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_036624,NR_036625_5end | |association_with_transcript=0bp_to_NR_036624,NR_036625_5end | ||
|cluster_id=chr5:133340611..133340676,- | |||
|description=CAGE_peak_2_at_VDAC1_5end | |description=CAGE_peak_2_at_VDAC1_5end | ||
|id=chr5:133340611..133340676,- | |id=chr5:133340611..133340676,- | ||
|ontology_enrichment_celltype=CL:0000723!1.49e-07!436;CL:0000048!2.18e-07!430 | |ontology_enrichment_celltype=CL:0000723!1.49e-07!436;CL:0000048!2.18e-07!430 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.90e-08,433;CL:0000048,5.79e-08,427;CL:0000034,3.65e-07,441 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.04e-09!22;UBERON:0001869!1.27e-09!32;UBERON:0002020!3.38e-09!34;UBERON:0003528!3.38e-09!34;UBERON:0001950!3.64e-09!20;UBERON:0001893!6.83e-09!34;UBERON:0002780!7.96e-09!41;UBERON:0001890!7.96e-09!41;UBERON:0006240!7.96e-09!41;UBERON:0003080!1.66e-08!42;UBERON:0002791!2.35e-08!33;UBERON:0001049!2.54e-08!57;UBERON:0005068!2.54e-08!57;UBERON:0006241!2.54e-08!57;UBERON:0007135!2.54e-08!57;UBERON:0000956!3.44e-07!25;UBERON:0000203!3.44e-07!25;UBERON:0000955!6.09e-07!69;UBERON:0006238!6.09e-07!69;UBERON:0002616!8.35e-07!59 | |ontology_enrichment_uberon=UBERON:0002619!1.04e-09!22;UBERON:0001869!1.27e-09!32;UBERON:0002020!3.38e-09!34;UBERON:0003528!3.38e-09!34;UBERON:0001950!3.64e-09!20;UBERON:0001893!6.83e-09!34;UBERON:0002780!7.96e-09!41;UBERON:0001890!7.96e-09!41;UBERON:0006240!7.96e-09!41;UBERON:0003080!1.66e-08!42;UBERON:0002791!2.35e-08!33;UBERON:0001049!2.54e-08!57;UBERON:0005068!2.54e-08!57;UBERON:0006241!2.54e-08!57;UBERON:0007135!2.54e-08!57;UBERON:0000956!3.44e-07!25;UBERON:0000203!3.44e-07!25;UBERON:0000955!6.09e-07!69;UBERON:0006238!6.09e-07!69;UBERON:0002616!8.35e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-09;22!UBERON:0001950;3.76e-09;20!UBERON:0001869;1.02e-08;32!UBERON:0003528;2.82e-08;34!UBERON:0002020;2.82e-08;34!UBERON:0001893;4.27e-08;34!UBERON:0002791;7.09e-08;32!UBERON:0000956;2.95e-07;25!UBERON:0000203;2.95e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-09;22!UBERON:0001950;3.76e-09;20!UBERON:0001869;1.02e-08;32!UBERON:0003528;2.82e-08;34!UBERON:0002020;2.82e-08;34!UBERON:0001893;4.27e-08;34!UBERON:0002791;7.09e-08;32!UBERON:0000956;2.95e-07;25!UBERON:0000203;2.95e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.04e-09,22;UBERON:0001869,1.26e-09,32;UBERON:0003528,3.38e-09,34;UBERON:0002020,3.38e-09,34;UBERON:0001950,3.63e-09,20;UBERON:0001893,6.81e-09,34;UBERON:0002780,7.95e-09,41;UBERON:0001890,7.95e-09,41;UBERON:0003080,7.95e-09,41;UBERON:0006240,7.95e-09,41;UBERON:0002791,1.27e-08,32;UBERON:0000073,1.35e-08,53;UBERON:0002616,1.35e-08,53;UBERON:0001049,1.43e-08,56;UBERON:0005068,1.43e-08,56;UBERON:0006241,1.43e-08,56;UBERON:0007135,1.43e-08,56;UBERON:0000956,3.44e-07,25;UBERON:0000203,3.44e-07,25;UBERON:0000955,3.99e-07,68;UBERON:0006238,3.99e-07,68 | |||
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| ||
|short_description=p2@VDAC1 | |short_description=p2@VDAC1 | ||
}} | }} |
Latest revision as of 07:27, 20 September 2015
Short description: | p2@VDAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VDAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_036624, NR_036625_5end |
EntrezGene: | VDAC1 |
HGNC: | 12669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.90e-08 | 433 |
multi fate stem cell | 5.79e-08 | 427 |
stem cell | 3.65e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.04e-09 | 22 |
cerebral hemisphere | 1.26e-09 | 32 |
brain grey matter | 3.38e-09 | 34 |
gray matter | 3.38e-09 | 34 |
neocortex | 3.63e-09 | 20 |
telencephalon | 6.81e-09 | 34 |
regional part of forebrain | 7.95e-09 | 41 |
forebrain | 7.95e-09 | 41 |
anterior neural tube | 7.95e-09 | 41 |
future forebrain | 7.95e-09 | 41 |
regional part of telencephalon | 1.27e-08 | 32 |
regional part of nervous system | 1.35e-08 | 53 |
regional part of brain | 1.35e-08 | 53 |
neural tube | 1.43e-08 | 56 |
neural rod | 1.43e-08 | 56 |
future spinal cord | 1.43e-08 | 56 |
neural keel | 1.43e-08 | 56 |
cerebral cortex | 3.44e-07 | 25 |
pallium | 3.44e-07 | 25 |
brain | 3.99e-07 | 68 |
future brain | 3.99e-07 | 68 |