FFCP PHASE1:Hg19::chr20:1875003..1875020,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:1875003..1875020,+
|short_description=p20@SIRPA
|description=CAGE_peak_20_at_SIRPA_5end
|association_with_transcript=-133bp_to_ENST00000400068_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140885 | |EntrezGene=140885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9662 | |HGNC=9662 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-133bp_to_ENST00000400068_5end | |||
|cluster_id=chr20:1875003..1875020,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_20_at_SIRPA_5end | |||
|id=chr20:1875003..1875020,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.48e-25!65;CL:0002194!9.82e-24!63;CL:0000576!9.82e-24!63;CL:0000040!9.82e-24!63;CL:0000559!9.82e-24!63;CL:0000557!5.04e-23!71;CL:0000766!2.54e-21!76;CL:0000839!9.20e-21!70;CL:0000763!1.81e-17!112;CL:0000049!1.81e-17!112;CL:0002057!5.74e-16!42;CL:0000860!3.62e-14!45;CL:0000738!1.58e-08!140;CL:0002031!1.94e-08!124;CL:0002032!8.25e-08!165;CL:0000837!8.25e-08!165;CL:0002087!1.44e-07!119;CL:0000037!7.69e-07!172;CL:0000566!7.69e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.34e-28;6!CL:0000840;1.63e-27;5!CL:0000473;1.13e-21;39!CL:0000234;1.13e-21;39!CL:0000990;2.65e-18;8!CL:0000451;6.06e-15;10!CL:0001014;1.04e-13;2!CL:0001016;1.04e-13;2!CL:0000860;1.87e-10;33!CL:0002057;1.87e-10;33!CL:0000766;2.00e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.22e-30,61;CL:0000557,1.29e-27,67;CL:0000840,1.35e-27,5;CL:0001029,1.35e-27,5;CL:0000235,1.43e-27,6;CL:0002194,7.29e-25,59;CL:0000576,7.29e-25,59;CL:0000040,7.29e-25,59;CL:0000559,7.29e-25,59;CL:0000766,1.35e-22,72;CL:0000839,6.31e-22,66;CL:0000473,1.71e-20,48;CL:0000234,1.71e-20,48;CL:0000990,2.35e-18,8;CL:0000763,7.08e-18,108;CL:0000049,7.08e-18,108;CL:0000451,5.49e-15,10;CL:0002031,6.46e-14,120;CL:0001014,8.60e-14,2;CL:0001016,8.60e-14,2;CL:0000738,1.96e-13,136;CL:0002087,2.69e-11,115;CL:0002032,9.09e-11,161;CL:0000837,9.09e-11,161;CL:0000037,3.66e-10,168;CL:0000988,1.86e-09,177;CL:0000860,9.00e-09,42;CL:0002057,9.00e-09,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.05e-19!80;UBERON:0001474!8.76e-19!86;UBERON:0004765!1.06e-16!101;UBERON:0001434!1.06e-16!101;UBERON:0002193!2.35e-15!112;UBERON:0002390!3.19e-15!102;UBERON:0003061!3.19e-15!102;UBERON:0002405!5.17e-14!115;UBERON:0002619!3.23e-10!22;UBERON:0001950!4.32e-10!20;UBERON:0001893!5.58e-10!34;UBERON:0002791!1.82e-09!33;UBERON:0001869!3.60e-09!32;UBERON:0002204!5.52e-09!167;UBERON:0000956!2.22e-08!25;UBERON:0000203!2.22e-08!25;UBERON:0002020!3.90e-08!34;UBERON:0003528!3.90e-08!34;UBERON:0002780!9.31e-08!41;UBERON:0001890!9.31e-08!41;UBERON:0006240!9.31e-08!41;UBERON:0003080!2.06e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.92e-12;5!UBERON:0001950;1.31e-10;20!UBERON:0002619;1.22e-09;22!UBERON:0000956;1.83e-08;25!UBERON:0000203;1.83e-08;25!UBERON:0002581;1.07e-07;1!UBERON:0002902;1.07e-07;1!UBERON:0009899;1.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.83e-24,76;UBERON:0001474,5.79e-22,82;UBERON:0004765,1.04e-19,90;UBERON:0002405,5.78e-19,93;UBERON:0002390,8.03e-18,98;UBERON:0003061,8.03e-18,98;UBERON:0001434,2.14e-17,100;UBERON:0002193,7.51e-16,108;UBERON:0002021,3.55e-12,5;UBERON:0001950,1.44e-10,20;UBERON:0002204,3.16e-10,167;UBERON:0002619,1.33e-09,22;UBERON:0000956,1.96e-08,25;UBERON:0000203,1.96e-08,25;UBERON:0003081,9.78e-08,203;UBERON:0002581,1.44e-07,1;UBERON:0002902,1.54e-07,1;UBERON:0009899,1.54e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.314843125254717,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,0.377875943688809,0.727752183563449,1.62700325833979,1.23350366406548,1.54853185447552,0.575384784644301,0.512321413058201,0.236482229888585,0.344745680736619,0,2.70852973188684,0.564727018627814,0.272906150057846,0.224723484445085,0.612167784741805,1.28371610830437,2.55734850319616,0,0.199463657621632,0.426224750532694,1.45104619314292,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,1.10483290796269,0.949387162322653,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.973269740605272,0,0,0,0.196468613246569,0,0,4.21911611751088,2.61194605948901,5.31831842075461,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0,0,0.286836620748814,0,0.560677600142307,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0,0,0,0.738651018262192,8.89216207529103,4.60756603095058,0,0.335964256397719,0.141775097242386,0,0,0,0,0.264145302039678,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0,0.285826432630578,0.112131084345361,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0,0.716243852959582,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.561320188866147,0.384417447767103,0,0.64341568457443,0,0,0.355123450626254,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.423347165447766,0,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.121360521749513,0,0,0,0,0,2.98244294329889,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,1.09692698576986,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.202203398942031,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.411125773940253,0,1.26621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0.795229689809303,0,0,0.137539436597234,0,1.1248694577575,1.5476039091159,0.668245123238271,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.610131324509816,0.500763722825999,1.14681839138014,0,0,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0,0.554805861502613,0,0.251567901752575,0,0,0.302461847526478,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0.664324201566815,0.654261577023377,0,0,0,0,0.320075189082423,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,1.41696576325585,0,2.05116364240755,0.252071696221718,1.10651603942749,0.645902582527404,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0.206686796501184,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11813715056843,0,0,0,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| ||
|short_description=p20@SIRPA | |||
}} | }} |
Latest revision as of 07:41, 20 September 2015
Short description: | p20@SIRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SIRPA_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -133bp_to_ENST00000400068_5end |
EntrezGene: | SIRPA |
HGNC: | 9662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.22e-30 | 61 |
granulocyte monocyte progenitor cell | 1.29e-27 | 67 |
immature conventional dendritic cell | 1.35e-27 | 5 |
common dendritic progenitor | 1.35e-27 | 5 |
macrophage | 1.43e-27 | 6 |
monopoietic cell | 7.29e-25 | 59 |
monocyte | 7.29e-25 | 59 |
monoblast | 7.29e-25 | 59 |
promonocyte | 7.29e-25 | 59 |
myeloid leukocyte | 1.35e-22 | 72 |
myeloid lineage restricted progenitor cell | 6.31e-22 | 66 |
defensive cell | 1.71e-20 | 48 |
phagocyte | 1.71e-20 | 48 |
conventional dendritic cell | 2.35e-18 | 8 |
myeloid cell | 7.08e-18 | 108 |
common myeloid progenitor | 7.08e-18 | 108 |
dendritic cell | 5.49e-15 | 10 |
hematopoietic lineage restricted progenitor cell | 6.46e-14 | 120 |
CD1a-positive Langerhans cell | 8.60e-14 | 2 |
immature CD1a-positive Langerhans cell | 8.60e-14 | 2 |
leukocyte | 1.96e-13 | 136 |
nongranular leukocyte | 2.69e-11 | 115 |
hematopoietic oligopotent progenitor cell | 9.09e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.09e-11 | 161 |
hematopoietic stem cell | 3.66e-10 | 168 |
hematopoietic cell | 1.86e-09 | 177 |
classical monocyte | 9.00e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.00e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.83e-24 | 76 |
bone element | 5.79e-22 | 82 |
skeletal element | 1.04e-19 | 90 |
immune system | 5.78e-19 | 93 |
hematopoietic system | 8.03e-18 | 98 |
blood island | 8.03e-18 | 98 |
skeletal system | 2.14e-17 | 100 |
hemolymphoid system | 7.51e-16 | 108 |
occipital lobe | 3.55e-12 | 5 |
neocortex | 1.44e-10 | 20 |
musculoskeletal system | 3.16e-10 | 167 |
regional part of cerebral cortex | 1.33e-09 | 22 |
cerebral cortex | 1.96e-08 | 25 |
pallium | 1.96e-08 | 25 |
lateral plate mesoderm | 9.78e-08 | 203 |
postcentral gyrus | 1.44e-07 | 1 |
occipital pole | 1.54e-07 | 1 |
pole of cerebral hemisphere | 1.54e-07 | 1 |